RNA–Protein interactions for RNA: ENST00000467112.5

RRP1-201, Transcript of ribosomal RNA processing 1, humanhuman

TSL 1 (best)

Gene RRP1, Length 3,019 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP1-201ENST00000467112 GAGE1Q13065 139 aa12.18□□□□□ -0.46
RRP1-201ENST00000467112 SRSF6Q13247 344 aaKnown RBP12.18□□□□□ -0.46
RRP1-201ENST00000467112 IGF2BP2-AS1Q96M15 143 aa12.18□□□□□ -0.46
RRP1-201ENST00000467112 SMIM27A0A1W2PRY6 76 aa12.18□□□□□ -0.46
RRP1-201ENST00000467112 FNDC10F2Z333 226 aa12.18□□□□□ -0.46
RRP1-201ENST00000467112 C3orf79P0CE67 100 aa12.18□□□□□ -0.46
RRP1-201ENST00000467112 NIT1Q86X76 327 aa12.18□□□□□ -0.46
RRP1-201ENST00000467112 FDCSPQ8NFU4 85 aa12.18□□□□□ -0.46
RRP1-201ENST00000467112 RP1L1Q8IWN7 2480 aaPredicted RBP12.18□□□□□ -0.46
RRP1-201ENST00000467112 TEX50A0A1B0GTY4 177 aa12.17□□□□□ -0.46
RRP1-201ENST00000467112 UPK2O00526 184 aa12.17□□□□□ -0.46
RRP1-201ENST00000467112 CDX4O14627 284 aaPredicted RBP12.17□□□□□ -0.46
RRP1-201ENST00000467112 ITGB1BP1O14713 200 aa12.17□□□□□ -0.46
RRP1-201ENST00000467112 TAS2R45P59539 299 aa12.17□□□□□ -0.46
RRP1-201ENST00000467112 SLAQ13239 276 aa12.17□□□□□ -0.46
RRP1-201ENST00000467112 BHLHA15Q7RTS1 189 aaPredicted RBP12.17□□□□□ -0.46
RRP1-201ENST00000467112 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.17□□□□□ -0.46
RRP1-201ENST00000467112 RND1Q92730 232 aa12.17□□□□□ -0.46
RRP1-201ENST00000467112 SLC25A33Q9BSK2 321 aa12.17□□□□□ -0.46
RRP1-201ENST00000467112 PLSCR4Q9NRQ2 329 aa12.17□□□□□ -0.46
RRP1-201ENST00000467112 PRR33A8MZF0 331 aa12.17□□□□□ -0.46
RRP1-201ENST00000467112 NKX2-8O15522 239 aa12.17□□□□□ -0.46
RRP1-201ENST00000467112 LHBP01229 141 aa12.17□□□□□ -0.46
RRP1-201ENST00000467112 HLA-DQA1P01909 254 aa12.17□□□□□ -0.46
RRP1-201ENST00000467112 POU2AF1Q16633 256 aa12.17□□□□□ -0.46
RRP1-201ENST00000467112 ATOH7Q8N100 152 aa12.17□□□□□ -0.46
RRP1-201ENST00000467112 ZNF439Q8NDP4 499 aa12.17□□□□□ -0.46
RRP1-201ENST00000467112 TSKUQ8WUA8 353 aa12.17□□□□□ -0.46
RRP1-201ENST00000467112 SLC35E1Q96K37 410 aa12.17□□□□□ -0.46
RRP1-201ENST00000467112 APCSP02743 223 aa12.16□□□□□ -0.46
RRP1-201ENST00000467112 C8orf88P0DMB2 117 aa12.16□□□□□ -0.46
RRP1-201ENST00000467112 CT45A6P0DMU7 189 aa12.16□□□□□ -0.46
RRP1-201ENST00000467112 CT45A5P0DMU8 189 aa12.16□□□□□ -0.46
RRP1-201ENST00000467112 CT45A7P0DMV0 189 aa12.16□□□□□ -0.46
RRP1-201ENST00000467112 COL5A1-AS1Q5SY13 56 aa12.16□□□□□ -0.46
RRP1-201ENST00000467112 SNRNP40Q96DI7 357 aaKnown RBP12.16□□□□□ -0.46
RRP1-201ENST00000467112 ADTRPQ96IZ2 230 aa12.16□□□□□ -0.46
RRP1-201ENST00000467112 SLC35D1Q9NTN3 355 aa12.16□□□□□ -0.46
RRP1-201ENST00000467112 SLC25A15Q9Y619 301 aa12.16□□□□□ -0.46
RRP1-201ENST00000467112 A0A1W2PRE2 83 aa12.16□□□□□ -0.46
RRP1-201ENST00000467112 M0R1B8 84 aa12.16□□□□□ -0.46
RRP1-201ENST00000467112 USF1P22415 310 aaPredicted RBP12.16□□□□□ -0.46
RRP1-201ENST00000467112 ZNF257Q9Y2Q1 563 aa12.16□□□□□ -0.46
RRP1-201ENST00000467112 DPRXA6NFQ7 191 aa12.16□□□□□ -0.46
RRP1-201ENST00000467112 HYPMO75409 117 aa12.16□□□□□ -0.46
RRP1-201ENST00000467112 RNASE2P10153 161 aaKnown RBP12.16□□□□□ -0.46
RRP1-201ENST00000467112 UBE2L3P68036 154 aaKnown RBP12.16□□□□□ -0.46
RRP1-201ENST00000467112 OR2T6Q8NHC8 308 aa12.16□□□□□ -0.46
RRP1-201ENST00000467112 TXN2Q99757 166 aa12.16□□□□□ -0.46
RRP1-201ENST00000467112 PROCRQ9UNN8 238 aa12.16□□□□□ -0.46
RRP1-201ENST00000467112 TRAV34A0A0B4J273 112 aa12.15□□□□□ -0.46
RRP1-201ENST00000467112 IGLC2P0DOY2 106 aa12.15□□□□□ -0.46
RRP1-201ENST00000467112 IGLC3P0DOY3 106 aa12.15□□□□□ -0.46
RRP1-201ENST00000467112 PRRX1P54821 245 aa12.15□□□□□ -0.46
RRP1-201ENST00000467112 COX19Q49B96 90 aa12.15□□□□□ -0.46
RRP1-201ENST00000467112 DMRTA1Q5VZB9 504 aa12.15□□□□□ -0.46
RRP1-201ENST00000467112 LCN12Q6JVE5 192 aa12.15□□□□□ -0.46
RRP1-201ENST00000467112 FAM167A-AS1Q96KT0 104 aa12.15□□□□□ -0.46
RRP1-201ENST00000467112 ZNF355PQ9NSJ1 428 aa12.15□□□□□ -0.46
RRP1-201ENST00000467112 DCHS1Q96JQ0 3298 aa12.15□□□□□ -0.46
RRP1-201ENST00000467112 LAMA5O15230 3695 aa12.15□□□□□ -0.46
RRP1-201ENST00000467112 TANC2Q9HCD6 1990 aa12.15□□□□□ -0.46
RRP1-201ENST00000467112 IZUMO1RA6ND01 250 aa12.15□□□□□ -0.46
RRP1-201ENST00000467112 SAA1P0DJI8 122 aaPredicted RBP12.15□□□□□ -0.46
RRP1-201ENST00000467112 PYYP10082 97 aa12.15□□□□□ -0.46
RRP1-201ENST00000467112 KLF3P57682 345 aaPredicted RBP12.15□□□□□ -0.46
RRP1-201ENST00000467112 MAJINQ3KP22 176 aa12.15□□□□□ -0.46
RRP1-201ENST00000467112 C2orf83Q53S99 150 aa12.15□□□□□ -0.46
RRP1-201ENST00000467112 Q6ZN92 141 aa12.15□□□□□ -0.46
RRP1-201ENST00000467112 FAM216BQ8N7L0 139 aa12.15□□□□□ -0.46
RRP1-201ENST00000467112 STPG4Q8N801 248 aa12.15□□□□□ -0.46
RRP1-201ENST00000467112 CCL13Q99616 98 aa12.15□□□□□ -0.46
RRP1-201ENST00000467112 SLC25A2Q9BXI2 301 aa12.15□□□□□ -0.46
RRP1-201ENST00000467112 ZNF331Q9NQX6 463 aaPredicted RBP12.15□□□□□ -0.46
RRP1-201ENST00000467112 NAV3Q8IVL0 2385 aa12.14□□□□□ -0.47
RRP1-201ENST00000467112 CHRNB4P30926 498 aa12.14□□□□□ -0.47
RRP1-201ENST00000467112 SSBP2P81877 361 aaPredicted RBP12.14□□□□□ -0.47
RRP1-201ENST00000467112 CD69Q07108 199 aa12.14□□□□□ -0.47
RRP1-201ENST00000467112 C18orf32Q8TCD1 76 aa12.14□□□□□ -0.47
RRP1-201ENST00000467112 DKK4Q9UBT3 224 aa12.14□□□□□ -0.47
RRP1-201ENST00000467112 UQCR10Q9UDW1 63 aa12.14□□□□□ -0.47
RRP1-201ENST00000467112 IGHV3-48P01763 117 aa12.14□□□□□ -0.47
RRP1-201ENST00000467112 PRR31Q5SQ13 230 aa12.14□□□□□ -0.47
RRP1-201ENST00000467112 C11orf42Q8N5U0 333 aa12.14□□□□□ -0.47
RRP1-201ENST00000467112 SARAFQ96BY9 339 aa12.14□□□□□ -0.47
RRP1-201ENST00000467112 MFAP2P55001 183 aa12.13□□□□□ -0.47
RRP1-201ENST00000467112 RTL8BQ17RB0 113 aa12.13□□□□□ -0.47
RRP1-201ENST00000467112 RBM14Q96PK6 669 aaKnown RBP12.13□□□□□ -0.47
RRP1-201ENST00000467112 E7EUB6 86 aa12.13□□□□□ -0.47
RRP1-201ENST00000467112 LINC00614P0C842 121 aa12.13□□□□□ -0.47
RRP1-201ENST00000467112 GDF5OSQ5U4N7 250 aa12.13□□□□□ -0.47
RRP1-201ENST00000467112 SPACA3Q8IXA5 215 aa12.13□□□□□ -0.47
RRP1-201ENST00000467112 BORCS7Q96B45 105 aa12.13□□□□□ -0.47
RRP1-201ENST00000467112 C19orf24Q9BVV8 132 aa12.13□□□□□ -0.47
RRP1-201ENST00000467112 CLEC7AQ9BXN2 247 aa12.13□□□□□ -0.47
RRP1-201ENST00000467112 RAB9BQ9NP90 201 aa12.13□□□□□ -0.47
RRP1-201ENST00000467112 ZFP30Q9Y2G7 519 aa12.13□□□□□ -0.47
RRP1-201ENST00000467112 ROS1P08922 2347 aa12.13□□□□□ -0.47
RRP1-201ENST00000467112 PSMB11A5LHX3 300 aa12.13□□□□□ -0.47
RRP1-201ENST00000467112 HNRNPA3P51991 378 aaKnown RBP12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms