RNA–Protein interactions for RNA: ENST00000466543.1

CYTH3-205, Transcript of cytohesin 3, humanhuman

TSL 4

Gene CYTH3, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYTH3-205ENST00000466543 ST8SIA2Q92186 375 aa12.61□□□□□ -0.39
CYTH3-205ENST00000466543 MRGPRFQ96AM1 343 aa12.61□□□□□ -0.39
CYTH3-205ENST00000466543 YIPF6Q96EC8 236 aa12.61□□□□□ -0.39
CYTH3-205ENST00000466543 RARRES2Q99969 163 aa12.61□□□□□ -0.39
CYTH3-205ENST00000466543 AGRNO00468 2067 aa12.6□□□□□ -0.39
CYTH3-205ENST00000466543 IGHV3-66A0A0C4DH42 116 aa12.6□□□□□ -0.39
CYTH3-205ENST00000466543 PRR20EP86478 221 aa12.6□□□□□ -0.39
CYTH3-205ENST00000466543 PRR20CP86479 221 aa12.6□□□□□ -0.39
CYTH3-205ENST00000466543 PRR20DP86480 221 aa12.6□□□□□ -0.39
CYTH3-205ENST00000466543 PRR20BP86481 221 aa12.6□□□□□ -0.39
CYTH3-205ENST00000466543 PRR20AP86496 221 aa12.6□□□□□ -0.39
CYTH3-205ENST00000466543 LGALS9CQ6DKI2 356 aa12.6□□□□□ -0.39
CYTH3-205ENST00000466543 TCF24Q7RTU0 167 aa12.6□□□□□ -0.39
CYTH3-205ENST00000466543 OR11H2Q8NH07 326 aa12.6□□□□□ -0.39
CYTH3-205ENST00000466543 PINX1Q96BK5 328 aaKnown RBP12.6□□□□□ -0.39
CYTH3-205ENST00000466543 TSC22D3Q99576 134 aa12.6□□□□□ -0.39
CYTH3-205ENST00000466543 TXN2Q99757 166 aa12.6□□□□□ -0.39
CYTH3-205ENST00000466543 TRAV14DV4A0A0A6YYC5 116 aa12.59□□□□□ -0.39
CYTH3-205ENST00000466543 H2BFWTQ7Z2G1 175 aa12.59□□□□□ -0.39
CYTH3-205ENST00000466543 CROCCP3Q8IVE0 287 aa12.59□□□□□ -0.39
CYTH3-205ENST00000466543 OR4A16Q8NH70 328 aa12.59□□□□□ -0.39
CYTH3-205ENST00000466543 GATAD1Q8WUU5 269 aa12.59□□□□□ -0.39
CYTH3-205ENST00000466543 VSIRQ9H7M9 311 aa12.59□□□□□ -0.39
CYTH3-205ENST00000466543 ZFAND3Q9H8U3 227 aa12.59□□□□□ -0.39
CYTH3-205ENST00000466543 FAM212BQ9NTI7 297 aaPredicted RBP12.59□□□□□ -0.39
CYTH3-205ENST00000466543 FBXL17Q9UF56 701 aa12.59□□□□□ -0.39
CYTH3-205ENST00000466543 IGKV1-5P01602 117 aa12.58□□□□□ -0.4
CYTH3-205ENST00000466543 HSPE1P61604 102 aaKnown RBP12.58□□□□□ -0.4
CYTH3-205ENST00000466543 LEMD1Q68G75 181 aa12.58□□□□□ -0.4
CYTH3-205ENST00000466543 C6orf62Q9GZU0 229 aaPredicted RBP12.58□□□□□ -0.4
CYTH3-205ENST00000466543 MS4A6AQ9H2W1 248 aa12.58□□□□□ -0.4
CYTH3-205ENST00000466543 C11orf68Q9H3H3 251 aaKnown RBP12.58□□□□□ -0.4
CYTH3-205ENST00000466543 MRPL36Q9P0J6 103 aaKnown RBP12.58□□□□□ -0.4
CYTH3-205ENST00000466543 A0A1B0GU03 582 aa12.57□□□□□ -0.4
CYTH3-205ENST00000466543 GNG7O60262 68 aa12.57□□□□□ -0.4
CYTH3-205ENST00000466543 DFFBO76075 338 aa12.57□□□□□ -0.4
CYTH3-205ENST00000466543 CA1P00915 261 aaPredicted RBP12.57□□□□□ -0.4
CYTH3-205ENST00000466543 GIG44P09565 113 aaPredicted RBP12.57□□□□□ -0.4
CYTH3-205ENST00000466543 P0C879 139 aa12.57□□□□□ -0.4
CYTH3-205ENST00000466543 TSPAN5P62079 268 aa12.57□□□□□ -0.4
CYTH3-205ENST00000466543 SNX29P2Q8IUI4 249 aa12.57□□□□□ -0.4
CYTH3-205ENST00000466543 C11orf45Q8TAV5 145 aa12.57□□□□□ -0.4
CYTH3-205ENST00000466543 A0A0B4J293 547 aa12.56□□□□□ -0.4
CYTH3-205ENST00000466543 M0QYG6 137 aa12.56□□□□□ -0.4
CYTH3-205ENST00000466543 ST8SIA3O43173 380 aa12.56□□□□□ -0.4
CYTH3-205ENST00000466543 PI3P19957 117 aa12.56□□□□□ -0.4
CYTH3-205ENST00000466543 UCP3P55916 312 aa12.56□□□□□ -0.4
CYTH3-205ENST00000466543 DEFB131AP59861 70 aa12.56□□□□□ -0.4
CYTH3-205ENST00000466543 COMMD3Q9UBI1 195 aa12.56□□□□□ -0.4
CYTH3-205ENST00000466543 PUS1Q9Y606 427 aaKnown RBP eCLIP12.56□□□□□ -0.4
CYTH3-205ENST00000466543 CMC4P56277 68 aaPredicted RBP12.55□□□□□ -0.4
CYTH3-205ENST00000466543 NCS1P62166 190 aa12.55□□□□□ -0.4
CYTH3-205ENST00000466543 RBMS2Q15434 407 aaKnown RBP12.55□□□□□ -0.4
CYTH3-205ENST00000466543 PVRIGQ6DKI7 326 aa12.55□□□□□ -0.4
CYTH3-205ENST00000466543 LPCAT3Q6P1A2 487 aa12.55□□□□□ -0.4
CYTH3-205ENST00000466543 CMTM3Q96MX0 182 aa12.55□□□□□ -0.4
CYTH3-205ENST00000466543 TP53RKQ96S44 253 aa12.55□□□□□ -0.4
CYTH3-205ENST00000466543 TMEM50AO95807 157 aa12.54□□□□□ -0.4
CYTH3-205ENST00000466543 APOA1P02647 267 aa12.54□□□□□ -0.4
CYTH3-205ENST00000466543 ELK1P19419 428 aa12.54□□□□□ -0.4
CYTH3-205ENST00000466543 RCVRNP35243 200 aa12.54□□□□□ -0.4
CYTH3-205ENST00000466543 ERHP84090 104 aaKnown RBP12.54□□□□□ -0.4
CYTH3-205ENST00000466543 MLANAQ16655 118 aa12.54□□□□□ -0.4
CYTH3-205ENST00000466543 Q8NAQ8 132 aa12.54□□□□□ -0.4
CYTH3-205ENST00000466543 GINS3Q9BRX5 216 aa12.54□□□□□ -0.4
CYTH3-205ENST00000466543 FNDC4Q9H6D8 234 aaPredicted RBP12.54□□□□□ -0.4
CYTH3-205ENST00000466543 SCPEP1Q9HB40 452 aa12.54□□□□□ -0.4
CYTH3-205ENST00000466543 FAT2Q9NYQ8 4349 aa12.53□□□□□ -0.4
CYTH3-205ENST00000466543 A0A0G2JRQ6 117 aa12.53□□□□□ -0.4
CYTH3-205ENST00000466543 HPGDSO60760 199 aa12.53□□□□□ -0.4
CYTH3-205ENST00000466543 RBMY1A1P0DJD3 496 aaKnown RBP12.53□□□□□ -0.4
CYTH3-205ENST00000466543 RBMY1CP0DJD4 496 aa12.53□□□□□ -0.4
CYTH3-205ENST00000466543 RNASE2P10153 161 aaKnown RBP12.53□□□□□ -0.4
CYTH3-205ENST00000466543 S100GP29377 79 aa12.53□□□□□ -0.4
CYTH3-205ENST00000466543 TMEM187Q14656 261 aa12.53□□□□□ -0.4
CYTH3-205ENST00000466543 RBMY1FQ15415 496 aaKnown RBP12.53□□□□□ -0.4
CYTH3-205ENST00000466543 RNASE12Q5GAN4 147 aaKnown RBP12.53□□□□□ -0.4
CYTH3-205ENST00000466543 ZNF600Q6ZNG1 722 aa12.53□□□□□ -0.4
CYTH3-205ENST00000466543 LHFPL1Q86WI0 220 aa12.53□□□□□ -0.4
CYTH3-205ENST00000466543 KIAA1109Q2LD37 5005 aa12.53□□□□□ -0.4
CYTH3-205ENST00000466543 INS-IGF2F8WCM5 200 aa12.52□□□□□ -0.41
CYTH3-205ENST00000466543 DNASE2O00115 360 aaPredicted RBP12.52□□□□□ -0.41
CYTH3-205ENST00000466543 ETV6P41212 452 aa12.52□□□□□ -0.41
CYTH3-205ENST00000466543 NPBWR1P48145 328 aa12.52□□□□□ -0.41
CYTH3-205ENST00000466543 PPP5CP53041 499 aa12.52□□□□□ -0.41
CYTH3-205ENST00000466543 RND3P61587 244 aa12.52□□□□□ -0.41
CYTH3-205ENST00000466543 RPL11P62913 178 aaKnown RBP12.52□□□□□ -0.41
CYTH3-205ENST00000466543 PAFAH1B2P68402 229 aa12.52□□□□□ -0.41
CYTH3-205ENST00000466543 DUSP18Q8NEJ0 188 aa12.52□□□□□ -0.41
CYTH3-205ENST00000466543 MFFQ9GZY8 342 aa12.52□□□□□ -0.41
CYTH3-205ENST00000466543 APLNQ9ULZ1 77 aa12.52□□□□□ -0.41
CYTH3-205ENST00000466543 DNAH2Q9P225 4427 aa12.52□□□□□ -0.41
CYTH3-205ENST00000466543 TRAV2A0A0B4J234 112 aa12.51□□□□□ -0.41
CYTH3-205ENST00000466543 C4BPBP20851 252 aa12.51□□□□□ -0.41
CYTH3-205ENST00000466543 PIGPP57054 158 aa12.51□□□□□ -0.41
CYTH3-205ENST00000466543 VBP1P61758 197 aa12.51□□□□□ -0.41
CYTH3-205ENST00000466543 SP6Q3SY56 376 aa12.51□□□□□ -0.41
CYTH3-205ENST00000466543 TRPT1Q86TN4 253 aaKnown RBP12.51□□□□□ -0.41
CYTH3-205ENST00000466543 C2CD4CQ8TF44 421 aa12.51□□□□□ -0.41
CYTH3-205ENST00000466543 KLK11Q9UBX7 282 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms