RNA–Protein interactions for RNA: ENST00000466171.1

CCDC93-205, Transcript of coiled-coil domain containing 93, humanhuman

TSL 3

Gene CCDC93, Length 477 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-205ENST00000466171 TSPAN32Q96QS1 320 aa0.67□□□□□ -2.3
CCDC93-205ENST00000466171 NIPSNAP1Q9BPW8 284 aa0.67□□□□□ -2.3
CCDC93-205ENST00000466171 ADAT1Q9BUB4 502 aaKnown RBP0.67□□□□□ -2.3
CCDC93-205ENST00000466171 CCDC90BQ9GZT6 254 aa0.67□□□□□ -2.3
CCDC93-205ENST00000466171 SLC39A9Q9NUM3 307 aa0.67□□□□□ -2.3
CCDC93-205ENST00000466171 MRPL27Q9P0M9 148 aaKnown RBP0.67□□□□□ -2.3
CCDC93-205ENST00000466171 CKLFQ9UBR5 152 aa0.67□□□□□ -2.3
CCDC93-205ENST00000466171 TMEM56-RWDD3S4R434 201 aa0.67□□□□□ -2.3
CCDC93-205ENST00000466171 PLB1Q6P1J6 1458 aa0.67□□□□□ -2.3
CCDC93-205ENST00000466171 ZFYVE9O95405 1425 aa0.66□□□□□ -2.3
CCDC93-205ENST00000466171 IGKV3D-7A0A0C4DH55 119 aa0.66□□□□□ -2.3
CCDC93-205ENST00000466171 IGKV3OR2-268A0A0C4DH90 116 aa0.66□□□□□ -2.3
CCDC93-205ENST00000466171 TRAPPC13A5PLN9 417 aa0.66□□□□□ -2.3
CCDC93-205ENST00000466171 F8W036 122 aa0.66□□□□□ -2.3
CCDC93-205ENST00000466171 BUB1B-PAK6H3BSN5 160 aa0.66□□□□□ -2.3
CCDC93-205ENST00000466171 OR5F1O95221 314 aa0.66□□□□□ -2.3
CCDC93-205ENST00000466171 IFNA10P01566 189 aa0.66□□□□□ -2.3
CCDC93-205ENST00000466171 CLPSP04118 112 aa0.66□□□□□ -2.3
CCDC93-205ENST00000466171 SMIM17P0DL12 118 aa0.66□□□□□ -2.3
CCDC93-205ENST00000466171 LYNX1P0DP58 116 aa0.66□□□□□ -2.3
CCDC93-205ENST00000466171 SPI1P17947 270 aa0.66□□□□□ -2.3
CCDC93-205ENST00000466171 FKBP2P26885 142 aaKnown RBP0.66□□□□□ -2.3
CCDC93-205ENST00000466171 SRSF6Q13247 344 aaKnown RBP0.66□□□□□ -2.3
CCDC93-205ENST00000466171 CDK10Q15131 360 aa0.66□□□□□ -2.3
CCDC93-205ENST00000466171 SPA17Q15506 151 aa0.66□□□□□ -2.3
CCDC93-205ENST00000466171 RGS21Q2M5E4 152 aa0.66□□□□□ -2.3
CCDC93-205ENST00000466171 DPPA3Q6W0C5 159 aa0.66□□□□□ -2.3
CCDC93-205ENST00000466171 MIR17HGQ75NE6 70 aa0.66□□□□□ -2.3
CCDC93-205ENST00000466171 ZNF565Q8N9K5 539 aa0.66□□□□□ -2.3
CCDC93-205ENST00000466171 C9orf163Q8N9P6 203 aa0.66□□□□□ -2.3
CCDC93-205ENST00000466171 OR5A1Q8NGJ0 315 aa0.66□□□□□ -2.3
CCDC93-205ENST00000466171 PFN4Q8NHR9 129 aa0.66□□□□□ -2.3
CCDC93-205ENST00000466171 C10orf105Q8TEF2 133 aa0.66□□□□□ -2.3
CCDC93-205ENST00000466171 ITFG2Q969R8 447 aa0.66□□□□□ -2.3
CCDC93-205ENST00000466171 SERPINI1Q99574 410 aa0.66□□□□□ -2.3
CCDC93-205ENST00000466171 SLC50A1Q9BRV3 221 aa0.66□□□□□ -2.3
CCDC93-205ENST00000466171 TRIM4Q9C037 500 aa0.66□□□□□ -2.3
CCDC93-205ENST00000466171 YIPF3Q9GZM5 350 aa0.66□□□□□ -2.3
CCDC93-205ENST00000466171 DCSTAMPQ9H295 470 aa0.66□□□□□ -2.3
CCDC93-205ENST00000466171 C14orf105Q9NVL8 296 aa0.66□□□□□ -2.3
CCDC93-205ENST00000466171 GLTPQ9NZD2 209 aa0.66□□□□□ -2.3
CCDC93-205ENST00000466171 ERGIC3Q9Y282 383 aa0.66□□□□□ -2.3
CCDC93-205ENST00000466171 PRELID3BQ9Y3B1 194 aa0.66□□□□□ -2.3
CCDC93-205ENST00000466171 LHFPL6Q9Y693 200 aa0.66□□□□□ -2.3
CCDC93-205ENST00000466171 CCDC88AQ3V6T2 1871 aa0.66□□□□□ -2.3
CCDC93-205ENST00000466171 SMARCA4P51532 1647 aa0.66□□□□□ -2.3
CCDC93-205ENST00000466171 PTPRBP23467 1997 aa0.66□□□□□ -2.3
CCDC93-205ENST00000466171 NUP155O75694 1391 aa0.66□□□□□ -2.3
CCDC93-205ENST00000466171 TONSLQ96HA7 1378 aa0.66□□□□□ -2.3
CCDC93-205ENST00000466171 MDC1Q14676 2089 aaKnown RBP0.66□□□□□ -2.3
CCDC93-205ENST00000466171 CUL9Q8IWT3 2517 aa0.66□□□□□ -2.3
CCDC93-205ENST00000466171 CR1P17927 2039 aa0.65□□□□□ -2.3
CCDC93-205ENST00000466171 CCDC144AA2RUR9 1427 aa0.65□□□□□ -2.3
CCDC93-205ENST00000466171 TOPBP1Q92547 1522 aa0.65□□□□□ -2.31
CCDC93-205ENST00000466171 MALRD1Q5VYJ5 2156 aa0.65□□□□□ -2.31
CCDC93-205ENST00000466171 hCG_1818297A0A087WSY0 165 aa0.65□□□□□ -2.31
CCDC93-205ENST00000466171 A0A087WUJ7 227 aa0.65□□□□□ -2.31
CCDC93-205ENST00000466171 IGKV2-40A0A087WW87 121 aaPredicted RBP0.65□□□□□ -2.31
CCDC93-205ENST00000466171 TRAV14DV4A0A0A6YYC5 116 aa0.65□□□□□ -2.31
CCDC93-205ENST00000466171 TRAV1-1A0A0B4J248 108 aa0.65□□□□□ -2.31
CCDC93-205ENST00000466171 hADV38S2A0JD32 116 aa0.65□□□□□ -2.31
CCDC93-205ENST00000466171 FUOMA2VDF0 154 aa0.65□□□□□ -2.31
CCDC93-205ENST00000466171 A8MT66 165 aa0.65□□□□□ -2.31
CCDC93-205ENST00000466171 C1orf196B1AJZ1 125 aa0.65□□□□□ -2.31
CCDC93-205ENST00000466171 IGKV2D-40P01614 121 aaPredicted RBP0.65□□□□□ -2.31
CCDC93-205ENST00000466171 TTRP02766 147 aa0.65□□□□□ -2.31
CCDC93-205ENST00000466171 S100A6P06703 90 aa0.65□□□□□ -2.31
CCDC93-205ENST00000466171 HTR1AP08908 422 aa0.65□□□□□ -2.31
CCDC93-205ENST00000466171 RBP1P09455 135 aa0.65□□□□□ -2.31
CCDC93-205ENST00000466171 S100A4P26447 101 aaKnown RBP0.65□□□□□ -2.31
CCDC93-205ENST00000466171 AP3S2P59780 193 aa0.65□□□□□ -2.31
CCDC93-205ENST00000466171 CDC42P60953 191 aa0.65□□□□□ -2.31
CCDC93-205ENST00000466171 EDDM3AQ14507 147 aa0.65□□□□□ -2.31
CCDC93-205ENST00000466171 ZNF846Q147U1 533 aa0.65□□□□□ -2.31
CCDC93-205ENST00000466171 KRTAP21-3Q3LHN1 58 aa0.65□□□□□ -2.31
CCDC93-205ENST00000466171 KRTAP5-10Q6L8G5 202 aa0.65□□□□□ -2.31
CCDC93-205ENST00000466171 HIST3H2BBQ8N257 126 aa0.65□□□□□ -2.31
CCDC93-205ENST00000466171 SIGLECL1Q8N7X8 197 aa0.65□□□□□ -2.31
CCDC93-205ENST00000466171 GDPD1Q8N9F7 314 aa0.65□□□□□ -2.31
CCDC93-205ENST00000466171 OR4E2Q8NGC2 313 aa0.65□□□□□ -2.31
CCDC93-205ENST00000466171 OR52R1Q8NGF1 315 aa0.65□□□□□ -2.31
CCDC93-205ENST00000466171 TERB2Q8NHR7 220 aa0.65□□□□□ -2.31
CCDC93-205ENST00000466171 CT55Q8WUE5 264 aa0.65□□□□□ -2.31
CCDC93-205ENST00000466171 BORCS7Q96B45 105 aa0.65□□□□□ -2.31
CCDC93-205ENST00000466171 REG4Q9BYZ8 158 aa0.65□□□□□ -2.31
CCDC93-205ENST00000466171 UCK1Q9HA47 277 aa0.65□□□□□ -2.31
CCDC93-205ENST00000466171 CYSLTR1Q9Y271 337 aa0.65□□□□□ -2.31
CCDC93-205ENST00000466171 SOX21Q9Y651 276 aaPredicted RBP0.65□□□□□ -2.31
CCDC93-205ENST00000466171 KIF13BQ9NQT8 1826 aa0.65□□□□□ -2.31
CCDC93-205ENST00000466171 ROBO3Q96MS0 1386 aa0.65□□□□□ -2.31
CCDC93-205ENST00000466171 ZFHX2Q9C0A1 2572 aaPredicted RBP0.64□□□□□ -2.31
CCDC93-205ENST00000466171 NUMA1Q14980 2115 aa0.64□□□□□ -2.31
CCDC93-205ENST00000466171 IGKV3-7A0A075B6H7 116 aa0.64□□□□□ -2.31
CCDC93-205ENST00000466171 TRAV3A0A0B4J244 114 aa0.64□□□□□ -2.31
CCDC93-205ENST00000466171 PDE6DO43924 150 aa0.64□□□□□ -2.31
CCDC93-205ENST00000466171 FADS1O60427 444 aa0.64□□□□□ -2.31
CCDC93-205ENST00000466171 ANGP03950 147 aaKnown RBP0.64□□□□□ -2.31
CCDC93-205ENST00000466171 CTSDP07339 412 aaPredicted RBP0.64□□□□□ -2.31
CCDC93-205ENST00000466171 ASAH2BP0C7U1 165 aa0.64□□□□□ -2.31
CCDC93-205ENST00000466171 SMIM10L2AP0DMW4 78 aa0.64□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms