RNA–Protein interactions for RNA: ENST00000466034.5

SOX2-OT-203, SOX2 overlapping transcript, humanhuman

TSL 1 (best) BASIC

Gene SOX2-OT, Length 926 nt, Biotype sense overlapping.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-203ENST00000466034 OR4A16Q8NH70 328 aa9.22□□□□□ -0.93
SOX2-OT-203ENST00000466034 LINC00476Q8WZB0 136 aa9.22□□□□□ -0.93
SOX2-OT-203ENST00000466034 COMMD3Q9UBI1 195 aa9.22□□□□□ -0.93
SOX2-OT-203ENST00000466034 NUPR2A6NF83 97 aa9.21□□□□□ -0.94
SOX2-OT-203ENST00000466034 INS-IGF2F8WCM5 200 aa9.21□□□□□ -0.94
SOX2-OT-203ENST00000466034 CHEK1O14757 476 aa9.21□□□□□ -0.94
SOX2-OT-203ENST00000466034 ZNF207O43670 478 aaKnown RBP9.21□□□□□ -0.94
SOX2-OT-203ENST00000466034 MT-CO2P00403 227 aa9.21□□□□□ -0.94
SOX2-OT-203ENST00000466034 NCS1P62166 190 aa9.21□□□□□ -0.94
SOX2-OT-203ENST00000466034 EWSR1Q01844 656 aaKnown RBP eCLIP9.21□□□□□ -0.94
SOX2-OT-203ENST00000466034 SNX29P2Q8IUI4 249 aa9.21□□□□□ -0.94
SOX2-OT-203ENST00000466034 TMEM116Q8NCL8 245 aa9.21□□□□□ -0.94
SOX2-OT-203ENST00000466034 MRGPRFQ96AM1 343 aa9.21□□□□□ -0.94
SOX2-OT-203ENST00000466034 MISP3Q96FF7 219 aa9.21□□□□□ -0.94
SOX2-OT-203ENST00000466034 ZNF486Q96H40 463 aaPredicted RBP9.21□□□□□ -0.94
SOX2-OT-203ENST00000466034 RNF2Q99496 336 aa9.21□□□□□ -0.94
SOX2-OT-203ENST00000466034 FUNDC2Q9BWH2 189 aa9.21□□□□□ -0.94
SOX2-OT-203ENST00000466034 RHPN1-AS1Q9BWJ2 59 aa9.21□□□□□ -0.94
SOX2-OT-203ENST00000466034 NXF2Q9GZY0 626 aaKnown RBP9.21□□□□□ -0.94
SOX2-OT-203ENST00000466034 MAP6D1Q9H9H5 199 aa9.21□□□□□ -0.94
SOX2-OT-203ENST00000466034 IGHV3OR16-8A0A075B7F1 116 aa9.2□□□□□ -0.94
SOX2-OT-203ENST00000466034 CXorf65A6NEN9 183 aa9.2□□□□□ -0.94
SOX2-OT-203ENST00000466034 CD5P06127 495 aa9.2□□□□□ -0.94
SOX2-OT-203ENST00000466034 ELK1P19419 428 aa9.2□□□□□ -0.94
SOX2-OT-203ENST00000466034 ERHP84090 104 aaKnown RBP9.2□□□□□ -0.94
SOX2-OT-203ENST00000466034 FAM90A2PQ658T7 463 aa9.2□□□□□ -0.94
SOX2-OT-203ENST00000466034 PVRIGQ6DKI7 326 aa9.2□□□□□ -0.94
SOX2-OT-203ENST00000466034 LHFPL1Q86WI0 220 aa9.2□□□□□ -0.94
SOX2-OT-203ENST00000466034 C6orf62Q9GZU0 229 aaPredicted RBP9.2□□□□□ -0.94
SOX2-OT-203ENST00000466034 TRAV14DV4A0A0A6YYC5 116 aa9.19□□□□□ -0.94
SOX2-OT-203ENST00000466034 GNG7O60262 68 aa9.19□□□□□ -0.94
SOX2-OT-203ENST00000466034 HPGDSO60760 199 aa9.19□□□□□ -0.94
SOX2-OT-203ENST00000466034 P0C879 139 aa9.19□□□□□ -0.94
SOX2-OT-203ENST00000466034 VBP1P61758 197 aa9.19□□□□□ -0.94
SOX2-OT-203ENST00000466034 PMS2P11Q13670 270 aa9.19□□□□□ -0.94
SOX2-OT-203ENST00000466034 CEMP1Q6PRD7 247 aaPredicted RBP9.19□□□□□ -0.94
SOX2-OT-203ENST00000466034 TMEM217Q8N7C4 229 aa9.19□□□□□ -0.94
SOX2-OT-203ENST00000466034 M0QYG6 137 aa9.18□□□□□ -0.94
SOX2-OT-203ENST00000466034 YIF1AO95070 293 aa9.18□□□□□ -0.94
SOX2-OT-203ENST00000466034 IGKV1-5P01602 117 aa9.18□□□□□ -0.94
SOX2-OT-203ENST00000466034 RPL35AP18077 110 aaKnown RBP9.18□□□□□ -0.94
SOX2-OT-203ENST00000466034 TBPP20226 339 aa9.18□□□□□ -0.94
SOX2-OT-203ENST00000466034 NPBWR1P48145 328 aa9.18□□□□□ -0.94
SOX2-OT-203ENST00000466034 RORCP51449 518 aa9.18□□□□□ -0.94
SOX2-OT-203ENST00000466034 MZT2AQ6P582 158 aa9.18□□□□□ -0.94
SOX2-OT-203ENST00000466034 APRG1Q8IVJ8 170 aa9.18□□□□□ -0.94
SOX2-OT-203ENST00000466034 ARRDC1Q8N5I2 433 aa9.18□□□□□ -0.94
SOX2-OT-203ENST00000466034 GATAD1Q8WUU5 269 aa9.18□□□□□ -0.94
SOX2-OT-203ENST00000466034 GINS3Q9BRX5 216 aa9.18□□□□□ -0.94
SOX2-OT-203ENST00000466034 VSIRQ9H7M9 311 aa9.18□□□□□ -0.94
SOX2-OT-203ENST00000466034 HECTD4Q9Y4D8 3996 aa9.17□□□□□ -0.94
SOX2-OT-203ENST00000466034 TRAV2A0A0B4J234 112 aa9.17□□□□□ -0.94
SOX2-OT-203ENST00000466034 A0A0B4J293 547 aa9.17□□□□□ -0.94
SOX2-OT-203ENST00000466034 ATG12O94817 140 aa9.17□□□□□ -0.94
SOX2-OT-203ENST00000466034 PGAM2P15259 253 aa9.17□□□□□ -0.94
SOX2-OT-203ENST00000466034 PIGPP57054 158 aa9.17□□□□□ -0.94
SOX2-OT-203ENST00000466034 PAFAH1B2P68402 229 aa9.17□□□□□ -0.94
SOX2-OT-203ENST00000466034 RNASE10Q5GAN6 216 aaKnown RBP9.17□□□□□ -0.94
SOX2-OT-203ENST00000466034 TOMM20LQ6UXN7 152 aa9.17□□□□□ -0.94
SOX2-OT-203ENST00000466034 ZNF600Q6ZNG1 722 aa9.17□□□□□ -0.94
SOX2-OT-203ENST00000466034 DUSP18Q8NEJ0 188 aa9.17□□□□□ -0.94
SOX2-OT-203ENST00000466034 PINX1Q96BK5 328 aaKnown RBP9.17□□□□□ -0.94
SOX2-OT-203ENST00000466034 TP53RKQ96S44 253 aa9.17□□□□□ -0.94
SOX2-OT-203ENST00000466034 CSTL1Q9H114 145 aa9.17□□□□□ -0.94
SOX2-OT-203ENST00000466034 MTFP1Q9UDX5 166 aa9.17□□□□□ -0.94
SOX2-OT-203ENST00000466034 KLK5Q9Y337 293 aaPredicted RBP9.17□□□□□ -0.94
SOX2-OT-203ENST00000466034 IGHV3-49A0A0A0MS15 119 aa9.16□□□□□ -0.94
SOX2-OT-203ENST00000466034 MPTX1A8MV57 137 aa9.16□□□□□ -0.94
SOX2-OT-203ENST00000466034 CORTO00230 105 aa9.16□□□□□ -0.94
SOX2-OT-203ENST00000466034 B3GALNT1O75752 331 aa9.16□□□□□ -0.94
SOX2-OT-203ENST00000466034 DFFBO76075 338 aa9.16□□□□□ -0.94
SOX2-OT-203ENST00000466034 IGHV3-48P01763 117 aa9.16□□□□□ -0.94
SOX2-OT-203ENST00000466034 CD3DP04234 171 aa9.16□□□□□ -0.94
SOX2-OT-203ENST00000466034 SNCAP37840 140 aa9.16□□□□□ -0.94
SOX2-OT-203ENST00000466034 ZNF124Q15973 351 aa9.16□□□□□ -0.94
SOX2-OT-203ENST00000466034 IZUMO4Q1ZYL8 232 aa9.16□□□□□ -0.94
SOX2-OT-203ENST00000466034 LCE2CQ5TA81 110 aa9.16□□□□□ -0.94
SOX2-OT-203ENST00000466034 TCF24Q7RTU0 167 aa9.16□□□□□ -0.94
SOX2-OT-203ENST00000466034 SLC35G3Q8N808 338 aa9.16□□□□□ -0.94
SOX2-OT-203ENST00000466034 OR52I2Q8NH67 350 aa9.16□□□□□ -0.94
SOX2-OT-203ENST00000466034 AP3S1Q92572 193 aa9.16□□□□□ -0.94
SOX2-OT-203ENST00000466034 KLK11Q9UBX7 282 aa9.16□□□□□ -0.94
SOX2-OT-203ENST00000466034 C3orf85A0A1B0GTC6 90 aa9.15□□□□□ -0.94
SOX2-OT-203ENST00000466034 FAM25AB3EWG3 89 aa9.15□□□□□ -0.94
SOX2-OT-203ENST00000466034 FAM25CB3EWG5 89 aa9.15□□□□□ -0.94
SOX2-OT-203ENST00000466034 FAM25GB3EWG6 89 aa9.15□□□□□ -0.94
SOX2-OT-203ENST00000466034 ST8SIA3O43173 380 aa9.15□□□□□ -0.94
SOX2-OT-203ENST00000466034 GABARAPO95166 117 aa9.15□□□□□ -0.94
SOX2-OT-203ENST00000466034 TMEM50AO95807 157 aa9.15□□□□□ -0.94
SOX2-OT-203ENST00000466034 LY6G6CO95867 125 aa9.15□□□□□ -0.94
SOX2-OT-203ENST00000466034 CD74P04233 296 aa9.15□□□□□ -0.94
SOX2-OT-203ENST00000466034 RNASE2P10153 161 aaKnown RBP9.15□□□□□ -0.94
SOX2-OT-203ENST00000466034 ZNF182P17025 639 aaPredicted RBP9.15□□□□□ -0.94
SOX2-OT-203ENST00000466034 PI3P19957 117 aa9.15□□□□□ -0.94
SOX2-OT-203ENST00000466034 UCP1P25874 307 aa9.15□□□□□ -0.94
SOX2-OT-203ENST00000466034 RPL5P46777 297 aaKnown RBP9.15□□□□□ -0.94
SOX2-OT-203ENST00000466034 TFPI2P48307 235 aa9.15□□□□□ -0.94
SOX2-OT-203ENST00000466034 AKR1C2P52895 323 aa9.15□□□□□ -0.94
SOX2-OT-203ENST00000466034 SUB1P53999 127 aaKnown RBP eCLIP9.15□□□□□ -0.94
SOX2-OT-203ENST00000466034 CTF1Q16619 201 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms