RNA–Protein interactions for RNA: ENST00000466017.1

VPS41-211, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-211ENST00000466017 HBG2P69892 147 aa4.33□□□□□ -1.72
VPS41-211ENST00000466017 SSBP2P81877 361 aaPredicted RBP4.33□□□□□ -1.72
VPS41-211ENST00000466017 PRB3Q04118 309 aaPredicted RBP4.33□□□□□ -1.72
VPS41-211ENST00000466017 SCGB2A2Q13296 93 aa4.33□□□□□ -1.72
VPS41-211ENST00000466017 MMDQ15546 238 aa4.33□□□□□ -1.72
VPS41-211ENST00000466017 RUSC1-AS1Q66K80 236 aa4.33□□□□□ -1.72
VPS41-211ENST00000466017 PDZD9Q8IXQ8 264 aa4.33□□□□□ -1.72
VPS41-211ENST00000466017 ZNF114Q8NC26 417 aa4.33□□□□□ -1.72
VPS41-211ENST00000466017 MAPK1IP1LQ8NDC0 245 aa4.33□□□□□ -1.72
VPS41-211ENST00000466017 STOML3Q8TAV4 291 aa4.33□□□□□ -1.72
VPS41-211ENST00000466017 CACNG8Q8WXS5 425 aa4.33□□□□□ -1.72
VPS41-211ENST00000466017 DPF1Q92782 380 aa4.33□□□□□ -1.72
VPS41-211ENST00000466017 PINX1Q96BK5 328 aaKnown RBP4.33□□□□□ -1.72
VPS41-211ENST00000466017 CLCC1Q96S66 551 aa4.33□□□□□ -1.72
VPS41-211ENST00000466017 ARPC5LQ9BPX5 153 aa4.33□□□□□ -1.72
VPS41-211ENST00000466017 FBXL15Q9H469 300 aa4.33□□□□□ -1.72
VPS41-211ENST00000466017 SLA2Q9H6Q3 261 aa4.33□□□□□ -1.72
VPS41-211ENST00000466017 ENY2Q9NPA8 101 aa4.33□□□□□ -1.72
VPS41-211ENST00000466017 CYTL1Q9NRR1 136 aa4.33□□□□□ -1.72
VPS41-211ENST00000466017 METTL1Q9UBP6 276 aaKnown RBP4.33□□□□□ -1.72
VPS41-211ENST00000466017 MOB4Q9Y3A3 225 aa4.33□□□□□ -1.72
VPS41-211ENST00000466017 STRAPQ9Y3F4 350 aaKnown RBP4.33□□□□□ -1.72
VPS41-211ENST00000466017 IGHV7-81A0A0B4J1V7 117 aa4.32□□□□□ -1.72
VPS41-211ENST00000466017 IGLC7A0M8Q6 106 aa4.32□□□□□ -1.72
VPS41-211ENST00000466017 IGSF23A1L1A6 192 aa4.32□□□□□ -1.72
VPS41-211ENST00000466017 C15orf62A8K5M9 175 aa4.32□□□□□ -1.72
VPS41-211ENST00000466017 PRSS46E5RG02 174 aa4.32□□□□□ -1.72
VPS41-211ENST00000466017 E7EUB6 86 aa4.32□□□□□ -1.72
VPS41-211ENST00000466017 CORTO00230 105 aa4.32□□□□□ -1.72
VPS41-211ENST00000466017 FCN1O00602 326 aa4.32□□□□□ -1.72
VPS41-211ENST00000466017 BCL2L11O43521 198 aa4.32□□□□□ -1.72
VPS41-211ENST00000466017 SSSCA1O60232 199 aa4.32□□□□□ -1.72
VPS41-211ENST00000466017 IGHG2P01859 326 aa4.32□□□□□ -1.72
VPS41-211ENST00000466017 IGF1P05019 195 aa4.32□□□□□ -1.72
VPS41-211ENST00000466017 RNASE2P10153 161 aaKnown RBP4.32□□□□□ -1.72
VPS41-211ENST00000466017 CTRB1P17538 263 aa4.32□□□□□ -1.72
VPS41-211ENST00000466017 MDKP21741 143 aaPredicted RBP4.32□□□□□ -1.72
VPS41-211ENST00000466017 CNTFRP26992 372 aa4.32□□□□□ -1.72
VPS41-211ENST00000466017 GPX4P36969 197 aaPredicted RBP4.32□□□□□ -1.72
VPS41-211ENST00000466017 NKX2-5P52952 324 aaPredicted RBP4.32□□□□□ -1.72
VPS41-211ENST00000466017 RPL15P61313 204 aaKnown RBP4.32□□□□□ -1.72
VPS41-211ENST00000466017 CX3CL1P78423 397 aa4.32□□□□□ -1.72
VPS41-211ENST00000466017 DLK1P80370 383 aa4.32□□□□□ -1.72
VPS41-211ENST00000466017 EWSR1Q01844 656 aaKnown RBP eCLIP4.32□□□□□ -1.72
VPS41-211ENST00000466017 HES1Q14469 280 aa4.32□□□□□ -1.72
VPS41-211ENST00000466017 ZNF266Q14584 549 aa4.32□□□□□ -1.72
VPS41-211ENST00000466017 VWC2Q2TAL6 325 aa4.32□□□□□ -1.72
VPS41-211ENST00000466017 DEFB112Q30KQ8 113 aa4.32□□□□□ -1.72
VPS41-211ENST00000466017 AKIRIN2Q53H80 203 aa4.32□□□□□ -1.72
VPS41-211ENST00000466017 SPANXN5Q5MJ07 72 aa4.32□□□□□ -1.72
VPS41-211ENST00000466017 FAM120AOSQ5T036 256 aa4.32□□□□□ -1.72
VPS41-211ENST00000466017 CTRB2Q6GPI1 263 aa4.32□□□□□ -1.72
VPS41-211ENST00000466017 BRD3OSQ6XYD6 125 aa4.32□□□□□ -1.72
VPS41-211ENST00000466017 CENPVQ7Z7K6 275 aaPredicted RBP4.32□□□□□ -1.72
VPS41-211ENST00000466017 STX12Q86Y82 276 aa4.32□□□□□ -1.72
VPS41-211ENST00000466017 TTC9CQ8N5M4 171 aa4.32□□□□□ -1.72
VPS41-211ENST00000466017 C5orf56Q8N8D9 126 aa4.32□□□□□ -1.72
VPS41-211ENST00000466017 UBAC2Q8NBM4 344 aa4.32□□□□□ -1.72
VPS41-211ENST00000466017 OR10P1Q8NGE3 313 aa4.32□□□□□ -1.72
VPS41-211ENST00000466017 SGMS2Q8NHU3 365 aa4.32□□□□□ -1.72
VPS41-211ENST00000466017 GRPEL2Q8TAA5 225 aa4.32□□□□□ -1.72
VPS41-211ENST00000466017 RNASEH2CQ8TDP1 164 aaKnown RBP4.32□□□□□ -1.72
VPS41-211ENST00000466017 SRSF12Q8WXF0 261 aaKnown RBP4.32□□□□□ -1.72
VPS41-211ENST00000466017 PHYHIPLQ96FC7 376 aa4.32□□□□□ -1.72
VPS41-211ENST00000466017 RASL11BQ9BPW5 248 aa4.32□□□□□ -1.72
VPS41-211ENST00000466017 ARL6Q9H0F7 186 aa4.32□□□□□ -1.72
VPS41-211ENST00000466017 MAGT1Q9H0U3 335 aa4.32□□□□□ -1.72
VPS41-211ENST00000466017 PLEKHA3Q9HB20 300 aa4.32□□□□□ -1.72
VPS41-211ENST00000466017 HEYLQ9NQ87 328 aaPredicted RBP4.32□□□□□ -1.72
VPS41-211ENST00000466017 TNFRSF18Q9Y5U5 241 aa4.32□□□□□ -1.72
VPS41-211ENST00000466017 TET2Q6N021 2002 aaPredicted RBP4.32□□□□□ -1.72
VPS41-211ENST00000466017 ANKRD17O75179 2603 aaKnown RBP4.32□□□□□ -1.72
VPS41-211ENST00000466017 CSPG4Q6UVK1 2322 aa4.31□□□□□ -1.72
VPS41-211ENST00000466017 APCP25054 2843 aa4.31□□□□□ -1.72
VPS41-211ENST00000466017 BORCS7-ASMTA0A0B4J1R7 106 aa4.31□□□□□ -1.72
VPS41-211ENST00000466017 A0A1B0GW64 132 aa4.31□□□□□ -1.72
VPS41-211ENST00000466017 NCBP2LA6PVI3 153 aaKnown RBP4.31□□□□□ -1.72
VPS41-211ENST00000466017 NPIPB5A8MRT5 1133 aa4.31□□□□□ -1.72
VPS41-211ENST00000466017 TEX22C9J3V5 150 aa4.31□□□□□ -1.72
VPS41-211ENST00000466017 H3BUA1 57 aa4.31□□□□□ -1.72
VPS41-211ENST00000466017 CLDN34H7C241 214 aa4.31□□□□□ -1.72
VPS41-211ENST00000466017 KCNAB3O43448 404 aa4.31□□□□□ -1.72
VPS41-211ENST00000466017 MPDU1O75352 247 aa4.31□□□□□ -1.72
VPS41-211ENST00000466017 CA2P00918 260 aa4.31□□□□□ -1.72
VPS41-211ENST00000466017 IFNA10P01566 189 aa4.31□□□□□ -1.72
VPS41-211ENST00000466017 SEC11BP0C7V7 166 aa4.31□□□□□ -1.72
VPS41-211ENST00000466017 IAPPP10997 89 aa4.31□□□□□ -1.72
VPS41-211ENST00000466017 HNF1AP20823 631 aa4.31□□□□□ -1.72
VPS41-211ENST00000466017 NPY1RP25929 384 aa4.31□□□□□ -1.72
VPS41-211ENST00000466017 SNCAP37840 140 aa4.31□□□□□ -1.72
VPS41-211ENST00000466017 CAV2P51636 162 aa4.31□□□□□ -1.72
VPS41-211ENST00000466017 UBA52P62987 128 aaKnown RBP4.31□□□□□ -1.72
VPS41-211ENST00000466017 IFITM2Q01629 132 aa4.31□□□□□ -1.72
VPS41-211ENST00000466017 TMEM267Q0VDI3 215 aaPredicted RBP4.31□□□□□ -1.72
VPS41-211ENST00000466017 PJVKQ0ZLH3 352 aa4.31□□□□□ -1.72
VPS41-211ENST00000466017 EXOSC2Q13868 293 aaKnown RBP4.31□□□□□ -1.72
VPS41-211ENST00000466017 HNF4GQ14541 408 aa4.31□□□□□ -1.72
VPS41-211ENST00000466017 FXYD3Q14802 87 aa4.31□□□□□ -1.72
VPS41-211ENST00000466017 PLGLAQ15195 96 aa4.31□□□□□ -1.72
VPS41-211ENST00000466017 TNXAQ16473 311 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms