RNA–Protein interactions for RNA: ENST00000465525.6

PTPRU-206, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 2

Gene PTPRU, Length 1,650 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-206ENST00000465525 C2orf83Q53S99 150 aa13.48□□□□□ -0.25
PTPRU-206ENST00000465525 ETV3LQ6ZN32 361 aa13.48□□□□□ -0.25
PTPRU-206ENST00000465525 OR2T6Q8NHC8 308 aa13.48□□□□□ -0.25
PTPRU-206ENST00000465525 MS4A10Q96PG2 267 aa13.48□□□□□ -0.25
PTPRU-206ENST00000465525 AQP10Q96PS8 301 aa13.48□□□□□ -0.25
PTPRU-206ENST00000465525 SLC25A31Q9H0C2 315 aa13.48□□□□□ -0.25
PTPRU-206ENST00000465525 SERTAD4Q9NUC0 356 aa13.48□□□□□ -0.25
PTPRU-206ENST00000465525 CRYGCP07315 174 aa13.47□□□□□ -0.25
PTPRU-206ENST00000465525 SULT1A1P50225 295 aa13.47□□□□□ -0.25
PTPRU-206ENST00000465525 SUB1P53999 127 aaKnown RBP eCLIP13.47□□□□□ -0.25
PTPRU-206ENST00000465525 MLANAQ16655 118 aa13.47□□□□□ -0.25
PTPRU-206ENST00000465525 LGALSLQ3ZCW2 172 aaPredicted RBP13.47□□□□□ -0.25
PTPRU-206ENST00000465525 ZNF114Q8NC26 417 aa13.47□□□□□ -0.25
PTPRU-206ENST00000465525 OR1P1Q8NH06 330 aa13.47□□□□□ -0.25
PTPRU-206ENST00000465525 PINX1Q96BK5 328 aaKnown RBP13.47□□□□□ -0.25
PTPRU-206ENST00000465525 C16orf95Q9H693 158 aa13.47□□□□□ -0.25
PTPRU-206ENST00000465525 PMS2P5A8MQ11 134 aa13.47□□□□□ -0.25
PTPRU-206ENST00000465525 ATP6V1G1O75348 118 aa13.47□□□□□ -0.25
PTPRU-206ENST00000465525 LY86O95711 162 aa13.47□□□□□ -0.25
PTPRU-206ENST00000465525 RAB11AP62491 216 aa13.47□□□□□ -0.25
PTPRU-206ENST00000465525 LAMTOR1Q6IAA8 161 aa13.47□□□□□ -0.25
PTPRU-206ENST00000465525 LCNL1Q6ZST4 164 aa13.47□□□□□ -0.25
PTPRU-206ENST00000465525 ACOT7LQ6ZUV0 252 aa13.47□□□□□ -0.25
PTPRU-206ENST00000465525 STX12Q86Y82 276 aa13.47□□□□□ -0.25
PTPRU-206ENST00000465525 C9orf62Q8N4C0 152 aa13.47□□□□□ -0.25
PTPRU-206ENST00000465525 HSPB11Q9Y547 144 aa13.47□□□□□ -0.25
PTPRU-206ENST00000465525 S4R3C0 116 aa13.47□□□□□ -0.25
PTPRU-206ENST00000465525 PPIFP30405 207 aaKnown RBP13.46□□□□□ -0.26
PTPRU-206ENST00000465525 CLINT1Q14677 625 aa13.46□□□□□ -0.26
PTPRU-206ENST00000465525 OR4F5Q8NH21 305 aa13.46□□□□□ -0.26
PTPRU-206ENST00000465525 FANCD2OSQ96PS1 177 aa13.46□□□□□ -0.26
PTPRU-206ENST00000465525 BOLA1Q9Y3E2 137 aa13.46□□□□□ -0.26
PTPRU-206ENST00000465525 C2CD3Q4AC94 2353 aa13.46□□□□□ -0.26
PTPRU-206ENST00000465525 OR2J3O76001 311 aa13.45□□□□□ -0.26
PTPRU-206ENST00000465525 CFHR3Q02985 330 aa13.45□□□□□ -0.26
PTPRU-206ENST00000465525 SLC38A11Q08AI6 406 aa13.45□□□□□ -0.26
PTPRU-206ENST00000465525 OR5C1Q8NGR4 320 aa13.45□□□□□ -0.26
PTPRU-206ENST00000465525 TMEM68Q96MH6 324 aa13.45□□□□□ -0.26
PTPRU-206ENST00000465525 FBXL17Q9UF56 701 aa13.45□□□□□ -0.26
PTPRU-206ENST00000465525 IGLV11-55A0A075B6I3 123 aa13.44□□□□□ -0.26
PTPRU-206ENST00000465525 PRSS46E5RG02 174 aa13.44□□□□□ -0.26
PTPRU-206ENST00000465525 PF4V1P10720 104 aa13.44□□□□□ -0.26
PTPRU-206ENST00000465525 OPRK1P41145 380 aa13.44□□□□□ -0.26
PTPRU-206ENST00000465525 TMUB2Q71RG4 321 aa13.44□□□□□ -0.26
PTPRU-206ENST00000465525 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.44□□□□□ -0.26
PTPRU-206ENST00000465525 OR10P1Q8NGE3 313 aa13.44□□□□□ -0.26
PTPRU-206ENST00000465525 FNDC4Q9H6D8 234 aaPredicted RBP13.44□□□□□ -0.26
PTPRU-206ENST00000465525 WFDC1Q9HC57 220 aa13.44□□□□□ -0.26
PTPRU-206ENST00000465525 PSMB11A5LHX3 300 aa13.44□□□□□ -0.26
PTPRU-206ENST00000465525 NDUFB8O95169 186 aa13.44□□□□□ -0.26
PTPRU-206ENST00000465525 OR2F1Q13607 317 aa13.44□□□□□ -0.26
PTPRU-206ENST00000465525 CENPVQ7Z7K6 275 aaPredicted RBP13.44□□□□□ -0.26
PTPRU-206ENST00000465525 LILRB2Q8N423 598 aa13.44□□□□□ -0.26
PTPRU-206ENST00000465525 KCNRGQ8N5I3 272 aa13.44□□□□□ -0.26
PTPRU-206ENST00000465525 OR1S2Q8NGQ3 325 aa13.44□□□□□ -0.26
PTPRU-206ENST00000465525 LINC01006Q8NI28 216 aa13.44□□□□□ -0.26
PTPRU-206ENST00000465525 ARL6Q9H0F7 186 aa13.44□□□□□ -0.26
PTPRU-206ENST00000465525 KLK15Q9H2R5 256 aa13.44□□□□□ -0.26
PTPRU-206ENST00000465525 FBXL7Q9UJT9 491 aa13.44□□□□□ -0.26
PTPRU-206ENST00000465525 ZNF580Q9UK33 172 aa13.44□□□□□ -0.26
PTPRU-206ENST00000465525 MT-CO2P00403 227 aa13.43□□□□□ -0.26
PTPRU-206ENST00000465525 IGHV3-23P01764 117 aa13.43□□□□□ -0.26
PTPRU-206ENST00000465525 TRGV3P03979 118 aa13.43□□□□□ -0.26
PTPRU-206ENST00000465525 C4BPBP20851 252 aa13.43□□□□□ -0.26
PTPRU-206ENST00000465525 RHOGP84095 191 aa13.43□□□□□ -0.26
PTPRU-206ENST00000465525 BAXQ07812 192 aa13.43□□□□□ -0.26
PTPRU-206ENST00000465525 PVRIGQ6DKI7 326 aa13.43□□□□□ -0.26
PTPRU-206ENST00000465525 HIST2H2BDQ6DRA6 164 aa13.43□□□□□ -0.26
PTPRU-206ENST00000465525 MRPL36Q9P0J6 103 aaKnown RBP13.43□□□□□ -0.26
PTPRU-206ENST00000465525 A0A1B0GUS0 222 aa13.42□□□□□ -0.26
PTPRU-206ENST00000465525 SMCO3A2RU48 225 aa13.42□□□□□ -0.26
PTPRU-206ENST00000465525 IGLV1-40P01703 118 aa13.42□□□□□ -0.26
PTPRU-206ENST00000465525 ATP5IP56385 69 aaPredicted RBP13.42□□□□□ -0.26
PTPRU-206ENST00000465525 TPPP2P59282 170 aa13.42□□□□□ -0.26
PTPRU-206ENST00000465525 HBG1P69891 147 aa13.42□□□□□ -0.26
PTPRU-206ENST00000465525 HBG2P69892 147 aa13.42□□□□□ -0.26
PTPRU-206ENST00000465525 FOXL1Q12952 345 aa13.42□□□□□ -0.26
PTPRU-206ENST00000465525 ZNF345Q14585 488 aa13.42□□□□□ -0.26
PTPRU-206ENST00000465525 KRTAP24-1Q3LI83 254 aa13.42□□□□□ -0.26
PTPRU-206ENST00000465525 RNASEH2CQ8TDP1 164 aaKnown RBP13.42□□□□□ -0.26
PTPRU-206ENST00000465525 FAM210AQ96ND0 272 aa13.42□□□□□ -0.26
PTPRU-206ENST00000465525 ATRQ13535 2644 aa13.41□□□□□ -0.26
PTPRU-206ENST00000465525 A0A0D9SG52 128 aa13.41□□□□□ -0.26
PTPRU-206ENST00000465525 CLPSL1A2RUU4 121 aa13.41□□□□□ -0.26
PTPRU-206ENST00000465525 MFSD2BA6NFX1 497 aa13.41□□□□□ -0.26
PTPRU-206ENST00000465525 I3L2K1 104 aa13.41□□□□□ -0.26
PTPRU-206ENST00000465525 K7EIM0 57 aa13.41□□□□□ -0.26
PTPRU-206ENST00000465525 MDKP21741 143 aaPredicted RBP13.41□□□□□ -0.26
PTPRU-206ENST00000465525 CD69Q07108 199 aa13.41□□□□□ -0.26
PTPRU-206ENST00000465525 SLC16A13Q7RTY0 426 aa13.41□□□□□ -0.26
PTPRU-206ENST00000465525 OR1L6Q8NGR2 347 aa13.41□□□□□ -0.26
PTPRU-206ENST00000465525 TRBV9A0A0B4J1U6 114 aa13.4□□□□□ -0.26
PTPRU-206ENST00000465525 UBE2L5PA0A1B0GUS4 154 aa13.4□□□□□ -0.26
PTPRU-206ENST00000465525 HAX1O00165 279 aa13.4□□□□□ -0.26
PTPRU-206ENST00000465525 IGHG4P01861 327 aa13.4□□□□□ -0.26
PTPRU-206ENST00000465525 S100A11P31949 105 aa13.4□□□□□ -0.26
PTPRU-206ENST00000465525 SLC35B1P78383 322 aa13.4□□□□□ -0.26
PTPRU-206ENST00000465525 ZNF767PQ75MW2 155 aa13.4□□□□□ -0.26
PTPRU-206ENST00000465525 KLHDC1Q8N7A1 406 aa13.4□□□□□ -0.26
PTPRU-206ENST00000465525 TMEM158Q8WZ71 300 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms