RNA–Protein interactions for RNA: ENST00000464577.1

USP48-206, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 2,089 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-206ENST00000464577 CRXO43186 299 aaPredicted RBP5.96□□□□□ -1.46
USP48-206ENST00000464577 IGKV3-15P01624 115 aa5.96□□□□□ -1.46
USP48-206ENST00000464577 PPBPP02775 128 aa5.96□□□□□ -1.46
USP48-206ENST00000464577 CGB3P0DN86 165 aa5.96□□□□□ -1.46
USP48-206ENST00000464577 CGB7P0DN87 165 aa5.96□□□□□ -1.46
USP48-206ENST00000464577 COL8A2P25067 703 aa5.96□□□□□ -1.46
USP48-206ENST00000464577 MFAP2P55001 183 aa5.96□□□□□ -1.46
USP48-206ENST00000464577 RHOGP84095 191 aa5.96□□□□□ -1.46
USP48-206ENST00000464577 GDF5OSQ5U4N7 250 aa5.96□□□□□ -1.46
USP48-206ENST00000464577 MBNL2Q5VZF2 373 aaKnown RBP5.96□□□□□ -1.46
USP48-206ENST00000464577 OR1L8Q8NGR8 309 aa5.96□□□□□ -1.46
USP48-206ENST00000464577 FAM167A-AS1Q96KT0 104 aa5.96□□□□□ -1.46
USP48-206ENST00000464577 CALYQ9NYX4 217 aa5.96□□□□□ -1.46
USP48-206ENST00000464577 DUSP13Q9UII6 198 aa5.96□□□□□ -1.46
USP48-206ENST00000464577 IGKV1OR2-108A0A075B7D4 117 aa5.95□□□□□ -1.46
USP48-206ENST00000464577 A0A1B0GXF2 115 aa5.95□□□□□ -1.46
USP48-206ENST00000464577 UPK2O00526 184 aa5.95□□□□□ -1.46
USP48-206ENST00000464577 SAA2P0DJI9 122 aaPredicted RBP5.95□□□□□ -1.46
USP48-206ENST00000464577 ACP1P24666 158 aa5.95□□□□□ -1.46
USP48-206ENST00000464577 CFHR2P36980 270 aa5.95□□□□□ -1.46
USP48-206ENST00000464577 REG1BP48304 166 aa5.95□□□□□ -1.46
USP48-206ENST00000464577 HCFC1P51610 2035 aa5.95□□□□□ -1.46
USP48-206ENST00000464577 UBE2L3P68036 154 aaKnown RBP5.95□□□□□ -1.46
USP48-206ENST00000464577 Q56UQ5 140 aa5.95□□□□□ -1.46
USP48-206ENST00000464577 LINC00696Q6ZRV3 163 aa5.95□□□□□ -1.46
USP48-206ENST00000464577 C1orf229Q6ZS94 237 aaPredicted RBP5.95□□□□□ -1.46
USP48-206ENST00000464577 C1orf162Q8NEQ5 155 aaPredicted RBP5.95□□□□□ -1.46
USP48-206ENST00000464577 NUP35Q8NFH5 326 aa5.95□□□□□ -1.46
USP48-206ENST00000464577 OR4C5Q8NGB2 326 aa5.95□□□□□ -1.46
USP48-206ENST00000464577 ZNF596Q8TC21 504 aa5.95□□□□□ -1.46
USP48-206ENST00000464577 FAM168AQ92567 244 aa5.95□□□□□ -1.46
USP48-206ENST00000464577 SMIM12Q96EX1 92 aa5.95□□□□□ -1.46
USP48-206ENST00000464577 PLPPR2Q96GM1 343 aa5.95□□□□□ -1.46
USP48-206ENST00000464577 TMEM70Q9BUB7 260 aa5.95□□□□□ -1.46
USP48-206ENST00000464577 SLC25A2Q9BXI2 301 aa5.95□□□□□ -1.46
USP48-206ENST00000464577 SPRR3Q9UBC9 169 aa5.95□□□□□ -1.46
USP48-206ENST00000464577 SIT1Q9Y3P8 196 aa5.95□□□□□ -1.46
USP48-206ENST00000464577 TMEM265A0A087WTH1 108 aa5.95□□□□□ -1.46
USP48-206ENST00000464577 TRGV5A0A0B4J1U4 118 aa5.95□□□□□ -1.46
USP48-206ENST00000464577 J3QR06 171 aa5.95□□□□□ -1.46
USP48-206ENST00000464577 PEX7O00628 323 aa5.95□□□□□ -1.46
USP48-206ENST00000464577 LYZL6O75951 148 aa5.95□□□□□ -1.46
USP48-206ENST00000464577 CA1P00915 261 aaPredicted RBP5.95□□□□□ -1.46
USP48-206ENST00000464577 HIST1H1EP10412 219 aaKnown RBP5.95□□□□□ -1.46
USP48-206ENST00000464577 CD69Q07108 199 aa5.95□□□□□ -1.46
USP48-206ENST00000464577 CT45A1Q5HYN5 189 aa5.95□□□□□ -1.46
USP48-206ENST00000464577 FAM120AOSQ5T036 256 aa5.95□□□□□ -1.46
USP48-206ENST00000464577 RNASEKQ6P5S7 137 aaKnown RBP5.95□□□□□ -1.46
USP48-206ENST00000464577 Q6ZT83 130 aa5.95□□□□□ -1.46
USP48-206ENST00000464577 Q6ZVH6 145 aa5.95□□□□□ -1.46
USP48-206ENST00000464577 ZNF329Q86UD4 541 aa5.95□□□□□ -1.46
USP48-206ENST00000464577 NUDT10Q8NFP7 164 aa5.95□□□□□ -1.46
USP48-206ENST00000464577 CT45A3Q8NHU0 189 aa5.95□□□□□ -1.46
USP48-206ENST00000464577 CACNG8Q8WXS5 425 aa5.95□□□□□ -1.46
USP48-206ENST00000464577 CHCHD1Q96BP2 118 aaKnown RBP5.95□□□□□ -1.46
USP48-206ENST00000464577 SNRNP40Q96DI7 357 aaKnown RBP5.95□□□□□ -1.46
USP48-206ENST00000464577 NUDT11Q96G61 164 aa5.95□□□□□ -1.46
USP48-206ENST00000464577 SSBP3Q9BWW4 388 aaPredicted RBP5.95□□□□□ -1.46
USP48-206ENST00000464577 C7orf69Q9H7B7 122 aa5.95□□□□□ -1.46
USP48-206ENST00000464577 AMMECR1Q9Y4X0 333 aaPredicted RBP5.95□□□□□ -1.46
USP48-206ENST00000464577 SOX21Q9Y651 276 aaPredicted RBP5.95□□□□□ -1.46
USP48-206ENST00000464577 SPTBN5Q9NRC6 3674 aaKnown RBP5.95□□□□□ -1.46
USP48-206ENST00000464577 DIDO1Q9BTC0 2240 aaKnown RBP5.95□□□□□ -1.46
USP48-206ENST00000464577 DOCK10Q96BY6 2186 aa5.95□□□□□ -1.46
USP48-206ENST00000464577 RNASE2P10153 161 aaKnown RBP5.94□□□□□ -1.46
USP48-206ENST00000464577 CD46P15529 392 aa5.94□□□□□ -1.46
USP48-206ENST00000464577 HOXC12P31275 282 aa5.94□□□□□ -1.46
USP48-206ENST00000464577 RPL8P62917 257 aaKnown RBP5.94□□□□□ -1.46
USP48-206ENST00000464577 C17orf58Q2M2W7 97 aa5.94□□□□□ -1.46
USP48-206ENST00000464577 TMEM30BQ3MIR4 351 aa5.94□□□□□ -1.46
USP48-206ENST00000464577 OR1L4Q8NGR5 311 aa5.94□□□□□ -1.46
USP48-206ENST00000464577 OR9G1Q8NH87 305 aa5.94□□□□□ -1.46
USP48-206ENST00000464577 FAM122AQ96E09 287 aa5.94□□□□□ -1.46
USP48-206ENST00000464577 URB1-AS1Q96HZ7 61 aa5.94□□□□□ -1.46
USP48-206ENST00000464577 HINT2Q9BX68 163 aa5.94□□□□□ -1.46
USP48-206ENST00000464577 ZNF355PQ9NSJ1 428 aa5.94□□□□□ -1.46
USP48-206ENST00000464577 CLCF1Q9UBD9 225 aa5.94□□□□□ -1.46
USP48-206ENST00000464577 RANBP2P49792 3224 aaKnown RBP5.94□□□□□ -1.46
USP48-206ENST00000464577 OR4C46A6NHA9 309 aa5.94□□□□□ -1.46
USP48-206ENST00000464577 PATE3B3GLJ2 98 aa5.94□□□□□ -1.46
USP48-206ENST00000464577 C9orf172C9J069 976 aa5.94□□□□□ -1.46
USP48-206ENST00000464577 INS-IGF2F8WCM5 200 aa5.94□□□□□ -1.46
USP48-206ENST00000464577 DLL1O00548 723 aa5.94□□□□□ -1.46
USP48-206ENST00000464577 IGLV1-44P01699 117 aa5.94□□□□□ -1.46
USP48-206ENST00000464577 HLA-DRB1P01911 266 aa5.94□□□□□ -1.46
USP48-206ENST00000464577 MYOD1P15172 320 aa5.94□□□□□ -1.46
USP48-206ENST00000464577 GATA2P23769 480 aaPredicted RBP5.94□□□□□ -1.46
USP48-206ENST00000464577 CEACAM8P31997 349 aaPredicted RBP5.94□□□□□ -1.46
USP48-206ENST00000464577 CA7P43166 264 aa5.94□□□□□ -1.46
USP48-206ENST00000464577 GUSBP1Q15486 140 aa5.94□□□□□ -1.46
USP48-206ENST00000464577 CT83Q5H943 113 aa5.94□□□□□ -1.46
USP48-206ENST00000464577 SPATA12Q7Z6I5 190 aa5.94□□□□□ -1.46
USP48-206ENST00000464577 MOB3BQ86TA1 216 aa5.94□□□□□ -1.46
USP48-206ENST00000464577 NHLRC2Q8NBF2 726 aa5.94□□□□□ -1.46
USP48-206ENST00000464577 LOXL4Q96JB6 756 aa5.94□□□□□ -1.46
USP48-206ENST00000464577 DEFB127Q9H1M4 99 aa5.94□□□□□ -1.46
USP48-206ENST00000464577 LAMA1P25391 3075 aa5.93□□□□□ -1.46
USP48-206ENST00000464577 SDK1Q7Z5N4 2213 aa5.93□□□□□ -1.46
USP48-206ENST00000464577 KBTBD11-OT1A0A1B0GTJ5 212 aa5.93□□□□□ -1.46
USP48-206ENST00000464577 TEX50A0A1B0GTY4 177 aa5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms