RNA–Protein interactions for RNA: ENST00000464435.1

USP25-207, Transcript of ubiquitin specific peptidase 25, humanhuman

TSL 3

Gene USP25, Length 845 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP25-207ENST00000464435 HIST1H4AP62805 103 aaKnown RBP2.36□□□□□ -2.03
USP25-207ENST00000464435 PSPHP78330 225 aa2.36□□□□□ -2.03
USP25-207ENST00000464435 LGALS9BQ3B8N2 356 aa2.36□□□□□ -2.03
USP25-207ENST00000464435 LGALS9CQ6DKI2 356 aa2.36□□□□□ -2.03
USP25-207ENST00000464435 ZFAND6Q6FIF0 208 aa2.36□□□□□ -2.03
USP25-207ENST00000464435 SDIM1Q6ZPB5 146 aa2.36□□□□□ -2.03
USP25-207ENST00000464435 ZNF767PQ75MW2 155 aa2.36□□□□□ -2.03
USP25-207ENST00000464435 RPRMLQ8N4K4 120 aa2.36□□□□□ -2.03
USP25-207ENST00000464435 CNEP1R1Q8N9A8 125 aa2.36□□□□□ -2.03
USP25-207ENST00000464435 OR10D4PQ8NGN7 298 aa2.36□□□□□ -2.03
USP25-207ENST00000464435 DNAJC9Q8WXX5 260 aa2.36□□□□□ -2.03
USP25-207ENST00000464435 CCDC115Q96NT0 180 aa2.36□□□□□ -2.03
USP25-207ENST00000464435 UPK3BQ9BT76 320 aa2.36□□□□□ -2.03
USP25-207ENST00000464435 XAGE1AQ9HD64 81 aa2.36□□□□□ -2.03
USP25-207ENST00000464435 SLC39A9Q9NUM3 307 aa2.36□□□□□ -2.03
USP25-207ENST00000464435 CKLFQ9UBR5 152 aa2.36□□□□□ -2.03
USP25-207ENST00000464435 TP73-AS1Q9UF72 201 aa2.36□□□□□ -2.03
USP25-207ENST00000464435 NLRC5Q86WI3 1866 aa2.35□□□□□ -2.03
USP25-207ENST00000464435 IGKV1D-43A0A0B4J1Z2 117 aa2.35□□□□□ -2.03
USP25-207ENST00000464435 TRAV38-1A0A0B4J264 116 aa2.35□□□□□ -2.03
USP25-207ENST00000464435 TRAV41A0A0B4J266 112 aa2.35□□□□□ -2.03
USP25-207ENST00000464435 EFCAB10A6NFE3 127 aa2.35□□□□□ -2.03
USP25-207ENST00000464435 C17orf51A8MQB3 221 aa2.35□□□□□ -2.03
USP25-207ENST00000464435 TRAPPC2LH3BP13 241 aa2.35□□□□□ -2.03
USP25-207ENST00000464435 J3KT08 172 aa2.35□□□□□ -2.03
USP25-207ENST00000464435 LEPROTO15243 131 aa2.35□□□□□ -2.03
USP25-207ENST00000464435 CDS2O95674 445 aa2.35□□□□□ -2.03
USP25-207ENST00000464435 IGHV3-53P01767 116 aa2.35□□□□□ -2.03
USP25-207ENST00000464435 CCL3P10147 92 aa2.35□□□□□ -2.03
USP25-207ENST00000464435 HRES1P13985 223 aa2.35□□□□□ -2.03
USP25-207ENST00000464435 COL8A2P25067 703 aa2.35□□□□□ -2.03
USP25-207ENST00000464435 CA5AP35218 305 aa2.35□□□□□ -2.03
USP25-207ENST00000464435 CD200P41217 278 aa2.35□□□□□ -2.03
USP25-207ENST00000464435 CDC42P60953 191 aa2.35□□□□□ -2.03
USP25-207ENST00000464435 MEF2BQ02080 365 aaPredicted RBP2.35□□□□□ -2.03
USP25-207ENST00000464435 BRMS1LQ5PSV4 323 aa2.35□□□□□ -2.03
USP25-207ENST00000464435 ZNF660Q6AZW8 331 aaPredicted RBP2.35□□□□□ -2.03
USP25-207ENST00000464435 LCA10Q71F78 164 aa2.35□□□□□ -2.03
USP25-207ENST00000464435 KTN1-AS1Q86SY8 53 aa2.35□□□□□ -2.03
USP25-207ENST00000464435 TRAPPC6BQ86SZ2 158 aa2.35□□□□□ -2.03
USP25-207ENST00000464435 ANGPTL5Q86XS5 388 aa2.35□□□□□ -2.03
USP25-207ENST00000464435 IFT20Q8IY31 132 aa2.35□□□□□ -2.03
USP25-207ENST00000464435 TMEM86AQ8N2M4 240 aa2.35□□□□□ -2.03
USP25-207ENST00000464435 NUP35Q8NFH5 326 aa2.35□□□□□ -2.03
USP25-207ENST00000464435 RNASE11Q8TAA1 199 aaKnown RBP2.35□□□□□ -2.03
USP25-207ENST00000464435 THEM6Q8WUY1 208 aa2.35□□□□□ -2.03
USP25-207ENST00000464435 CAPZA3Q96KX2 299 aa2.35□□□□□ -2.03
USP25-207ENST00000464435 PFDN5Q99471 154 aa2.35□□□□□ -2.03
USP25-207ENST00000464435 MIEN1Q9BRT3 115 aa2.35□□□□□ -2.03
USP25-207ENST00000464435 DOHHQ9BU89 302 aa2.35□□□□□ -2.03
USP25-207ENST00000464435 DERL1Q9BUN8 251 aa2.35□□□□□ -2.03
USP25-207ENST00000464435 TTTY13Q9BZ97 58 aa2.35□□□□□ -2.03
USP25-207ENST00000464435 RASL12Q9NYN1 266 aa2.35□□□□□ -2.03
USP25-207ENST00000464435 JPT1Q9UK76 154 aa2.35□□□□□ -2.03
USP25-207ENST00000464435 PCTPQ9UKL6 214 aa2.35□□□□□ -2.03
USP25-207ENST00000464435 LAMTOR2Q9Y2Q5 125 aa2.35□□□□□ -2.03
USP25-207ENST00000464435 ZNF407Q9C0G0 2248 aa2.35□□□□□ -2.03
USP25-207ENST00000464435 DOCK6Q96HP0 2047 aa2.35□□□□□ -2.03
USP25-207ENST00000464435 VIRMAQ69YN4 1812 aaKnown RBP2.35□□□□□ -2.03
USP25-207ENST00000464435 ADGRL1O94910 1474 aa2.34□□□□□ -2.03
USP25-207ENST00000464435 IGKV1D-37A0A075B6S9 117 aa2.34□□□□□ -2.03
USP25-207ENST00000464435 IGHV3-73A0A0B4J1V6 119 aa2.34□□□□□ -2.03
USP25-207ENST00000464435 A0A1W2PNN7 141 aa2.34□□□□□ -2.03
USP25-207ENST00000464435 FABP5P3A8MUU1 101 aa2.34□□□□□ -2.03
USP25-207ENST00000464435 DEGS1O15121 323 aa2.34□□□□□ -2.03
USP25-207ENST00000464435 ZNF73O43830 326 aaPredicted RBP2.34□□□□□ -2.03
USP25-207ENST00000464435 HLA-DMBP28068 263 aa2.34□□□□□ -2.03
USP25-207ENST00000464435 RBM11P57052 281 aaKnown RBP2.34□□□□□ -2.03
USP25-207ENST00000464435 CKS1BP61024 79 aa2.34□□□□□ -2.03
USP25-207ENST00000464435 RPL18Q07020 188 aaKnown RBP2.34□□□□□ -2.03
USP25-207ENST00000464435 HTR4Q13639 388 aa2.34□□□□□ -2.03
USP25-207ENST00000464435 SPANXN3Q5MJ09 141 aa2.34□□□□□ -2.03
USP25-207ENST00000464435 ZNF705AQ6ZN79 300 aaPredicted RBP2.34□□□□□ -2.03
USP25-207ENST00000464435 OR5C1Q8NGR4 320 aa2.34□□□□□ -2.03
USP25-207ENST00000464435 SMDT1Q9H4I9 107 aa2.34□□□□□ -2.03
USP25-207ENST00000464435 ASF1BQ9NVP2 202 aa2.34□□□□□ -2.03
USP25-207ENST00000464435 ZNF638Q14966 1978 aaKnown RBP2.34□□□□□ -2.04
USP25-207ENST00000464435 ADAMTSL1Q8N6G6 1762 aa2.33□□□□□ -2.04
USP25-207ENST00000464435 IRGMA1A4Y4 181 aa2.33□□□□□ -2.04
USP25-207ENST00000464435 C19orf71A6NCJ1 209 aa2.33□□□□□ -2.04
USP25-207ENST00000464435 SOD1P00441 154 aa2.33□□□□□ -2.04
USP25-207ENST00000464435 NPYP01303 97 aa2.33□□□□□ -2.04
USP25-207ENST00000464435 COX4I1P13073 169 aa2.33□□□□□ -2.04
USP25-207ENST00000464435 NFYBP25208 207 aa2.33□□□□□ -2.04
USP25-207ENST00000464435 SRIP30626 198 aa2.33□□□□□ -2.04
USP25-207ENST00000464435 SRP14P37108 136 aaKnown RBP2.33□□□□□ -2.04
USP25-207ENST00000464435 AKR1C3P42330 323 aa2.33□□□□□ -2.04
USP25-207ENST00000464435 ZNF80P51504 273 aaPredicted RBP2.33□□□□□ -2.04
USP25-207ENST00000464435 YPEL3P61236 119 aaPredicted RBP2.33□□□□□ -2.04
USP25-207ENST00000464435 OR8B8Q15620 311 aa2.33□□□□□ -2.04
USP25-207ENST00000464435 RRN3P1Q2M238 152 aa2.33□□□□□ -2.04
USP25-207ENST00000464435 SMIM21Q3B7S5 101 aa2.33□□□□□ -2.04
USP25-207ENST00000464435 KRTAP25-1Q3LHN0 102 aa2.33□□□□□ -2.04
USP25-207ENST00000464435 BCL2L15Q5TBC7 163 aa2.33□□□□□ -2.04
USP25-207ENST00000464435 FKBP1CQ5VVH2 108 aa2.33□□□□□ -2.04
USP25-207ENST00000464435 BPIFA4PQ86YQ2 179 aa2.33□□□□□ -2.04
USP25-207ENST00000464435 OR4D11Q8NGI4 311 aa2.33□□□□□ -2.04
USP25-207ENST00000464435 ISOC1Q96CN7 298 aa2.33□□□□□ -2.04
USP25-207ENST00000464435 GINS4Q9BRT9 223 aa2.33□□□□□ -2.04
USP25-207ENST00000464435 NCOA3Q9Y6Q9 1424 aa2.33□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms