RNA–Protein interactions for RNA: ENST00000464362.5

HPS4-208, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 5

Gene HPS4, Length 4,277 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-208ENST00000464362 GBGT1Q8N5D6 347 aa7.56□□□□□ -1.2
HPS4-208ENST00000464362 MRPL20Q9BYC9 149 aaKnown RBP7.56□□□□□ -1.2
HPS4-208ENST00000464362 THYN1Q9P016 225 aa7.56□□□□□ -1.2
HPS4-208ENST00000464362 XIRP2A4UGR9 3374 aa7.56□□□□□ -1.2
HPS4-208ENST00000464362 IFITM10A6NMD0 228 aa7.56□□□□□ -1.2
HPS4-208ENST00000464362 IQCF6A8MYZ5 107 aa7.56□□□□□ -1.2
HPS4-208ENST00000464362 F5H697 171 aa7.56□□□□□ -1.2
HPS4-208ENST00000464362 LEPROTL1O95214 131 aa7.56□□□□□ -1.2
HPS4-208ENST00000464362 VENTXO95231 258 aa7.56□□□□□ -1.2
HPS4-208ENST00000464362 MT-ND6P03923 174 aa7.56□□□□□ -1.2
HPS4-208ENST00000464362 HTN1P15515 57 aa7.56□□□□□ -1.2
HPS4-208ENST00000464362 DUTP33316 252 aaKnown RBP7.56□□□□□ -1.2
HPS4-208ENST00000464362 NMUP48645 174 aa7.56□□□□□ -1.2
HPS4-208ENST00000464362 COX19Q49B96 90 aa7.56□□□□□ -1.2
HPS4-208ENST00000464362 MORN2Q502X0 79 aa7.56□□□□□ -1.2
HPS4-208ENST00000464362 KCNS1Q96KK3 526 aa7.56□□□□□ -1.2
HPS4-208ENST00000464362 TXNDC17Q9BRA2 123 aa7.56□□□□□ -1.2
HPS4-208ENST00000464362 NCOR2Q9Y618 2525 aa7.56□□□□□ -1.2
HPS4-208ENST00000464362 CIDEAO60543 219 aa7.56□□□□□ -1.2
HPS4-208ENST00000464362 CEACAM1P13688 526 aa7.56□□□□□ -1.2
HPS4-208ENST00000464362 ADMP35318 185 aa7.56□□□□□ -1.2
HPS4-208ENST00000464362 TFPI2P48307 235 aa7.56□□□□□ -1.2
HPS4-208ENST00000464362 GNG5P63218 68 aa7.56□□□□□ -1.2
HPS4-208ENST00000464362 NRN1LQ496H8 165 aa7.56□□□□□ -1.2
HPS4-208ENST00000464362 STXBP6Q8NFX7 210 aa7.56□□□□□ -1.2
HPS4-208ENST00000464362 OR4C13Q8NGP0 309 aa7.56□□□□□ -1.2
HPS4-208ENST00000464362 FBXL15Q9H469 300 aa7.56□□□□□ -1.2
HPS4-208ENST00000464362 PROK2Q9HC23 129 aa7.56□□□□□ -1.2
HPS4-208ENST00000464362 ZNF503-AS2A6NEH8 195 aa7.55□□□□□ -1.2
HPS4-208ENST00000464362 CEACAM3P40198 252 aa7.55□□□□□ -1.2
HPS4-208ENST00000464362 MLANAQ16655 118 aa7.55□□□□□ -1.2
HPS4-208ENST00000464362 OR8B3Q8NGG8 313 aa7.55□□□□□ -1.2
HPS4-208ENST00000464362 PRR7Q8TB68 274 aa7.55□□□□□ -1.2
HPS4-208ENST00000464362 SEPSECSQ9HD40 501 aaKnown RBP7.55□□□□□ -1.2
HPS4-208ENST00000464362 TRAV5A0A0B4J249 113 aa7.55□□□□□ -1.2
HPS4-208ENST00000464362 IFNL4K9M1U5 179 aa7.55□□□□□ -1.2
HPS4-208ENST00000464362 CORTO00230 105 aa7.55□□□□□ -1.2
HPS4-208ENST00000464362 CCL21O00585 134 aa7.55□□□□□ -1.2
HPS4-208ENST00000464362 IGHV3-23P01764 117 aa7.55□□□□□ -1.2
HPS4-208ENST00000464362 PPOXP50336 477 aa7.55□□□□□ -1.2
HPS4-208ENST00000464362 LINC01560Q8TB33 94 aa7.55□□□□□ -1.2
HPS4-208ENST00000464362 HSPB7Q9UBY9 170 aa7.55□□□□□ -1.2
HPS4-208ENST00000464362 CCDC168Q8NDH2 2452 aa7.55□□□□□ -1.2
HPS4-208ENST00000464362 SETD2Q9BYW2 2564 aaPredicted RBP7.55□□□□□ -1.2
HPS4-208ENST00000464362 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.55□□□□□ -1.2
HPS4-208ENST00000464362 SELENOTP62341 195 aa7.55□□□□□ -1.2
HPS4-208ENST00000464362 RIGQ13278 110 aa7.55□□□□□ -1.2
HPS4-208ENST00000464362 RNFT1Q5M7Z0 435 aa7.55□□□□□ -1.2
HPS4-208ENST00000464362 MBD3L1Q8WWY6 194 aa7.55□□□□□ -1.2
HPS4-208ENST00000464362 NDUFAF3Q9BU61 184 aa7.55□□□□□ -1.2
HPS4-208ENST00000464362 ZNRD1Q9P1U0 126 aa7.55□□□□□ -1.2
HPS4-208ENST00000464362 WDR83OSQ9Y284 106 aa7.55□□□□□ -1.2
HPS4-208ENST00000464362 SZT2Q5T011 3432 aa7.55□□□□□ -1.2
HPS4-208ENST00000464362 IGKV3D-15A0A087WSY6 115 aa7.55□□□□□ -1.2
HPS4-208ENST00000464362 KBTBD11-OT1A0A1B0GTJ5 212 aa7.55□□□□□ -1.2
HPS4-208ENST00000464362 DPRXA6NFQ7 191 aa7.55□□□□□ -1.2
HPS4-208ENST00000464362 SAA1P0DJI8 122 aaPredicted RBP7.55□□□□□ -1.2
HPS4-208ENST00000464362 LYL1P12980 280 aa7.55□□□□□ -1.2
HPS4-208ENST00000464362 TIMP3P35625 211 aa7.55□□□□□ -1.2
HPS4-208ENST00000464362 ZNF146Q15072 292 aa7.55□□□□□ -1.2
HPS4-208ENST00000464362 ZNF585BQ52M93 769 aa7.55□□□□□ -1.2
HPS4-208ENST00000464362 FAM90A2PQ658T7 463 aa7.55□□□□□ -1.2
HPS4-208ENST00000464362 TREML4Q6UXN2 200 aa7.55□□□□□ -1.2
HPS4-208ENST00000464362 RAB37Q96AX2 223 aa7.55□□□□□ -1.2
HPS4-208ENST00000464362 SNRNP40Q96DI7 357 aaKnown RBP7.55□□□□□ -1.2
HPS4-208ENST00000464362 RAB1BQ9H0U4 201 aa7.55□□□□□ -1.2
HPS4-208ENST00000464362 IL36BQ9NZH7 164 aa7.55□□□□□ -1.2
HPS4-208ENST00000464362 NBEAP1P0C6P0 100 aa7.54□□□□□ -1.2
HPS4-208ENST00000464362 CFPP27918 469 aa7.54□□□□□ -1.2
HPS4-208ENST00000464362 LCN2P80188 198 aa7.54□□□□□ -1.2
HPS4-208ENST00000464362 EFNB3Q15768 340 aa7.54□□□□□ -1.2
HPS4-208ENST00000464362 OR4B1Q8NGF8 309 aa7.54□□□□□ -1.2
HPS4-208ENST00000464362 IFI27L2Q9H2X8 130 aa7.54□□□□□ -1.2
HPS4-208ENST00000464362 UBTD1Q9HAC8 227 aa7.54□□□□□ -1.2
HPS4-208ENST00000464362 SEMA5BQ9P283 1151 aa7.54□□□□□ -1.2
HPS4-208ENST00000464362 YTHDF2Q9Y5A9 579 aaKnown RBP7.54□□□□□ -1.2
HPS4-208ENST00000464362 COMPP49747 757 aaPredicted RBP7.54□□□□□ -1.2
HPS4-208ENST00000464362 TCF24Q7RTU0 167 aa7.54□□□□□ -1.2
HPS4-208ENST00000464362 WFDC3Q8IUB2 231 aa7.54□□□□□ -1.2
HPS4-208ENST00000464362 PNKDQ8N490 385 aa7.54□□□□□ -1.2
HPS4-208ENST00000464362 TMEM170AQ8WVE7 144 aa7.54□□□□□ -1.2
HPS4-208ENST00000464362 MRPL37Q9BZE1 423 aaKnown RBP7.54□□□□□ -1.2
HPS4-208ENST00000464362 ALPK3Q96L96 1907 aa7.54□□□□□ -1.2
HPS4-208ENST00000464362 FOLR2P14207 255 aa7.54□□□□□ -1.2
HPS4-208ENST00000464362 COQ2Q96H96 371 aa7.54□□□□□ -1.2
HPS4-208ENST00000464362 UQCR10Q9UDW1 63 aa7.54□□□□□ -1.2
HPS4-208ENST00000464362 KIF26AQ9ULI4 1882 aaPredicted RBP7.53□□□□□ -1.2
HPS4-208ENST00000464362 TRBV24-1A0A075B6N3 115 aa7.53□□□□□ -1.2
HPS4-208ENST00000464362 FOXH1O75593 365 aa7.53□□□□□ -1.2
HPS4-208ENST00000464362 AMY1AP04745 511 aa7.53□□□□□ -1.2
HPS4-208ENST00000464362 IL4P05112 153 aa7.53□□□□□ -1.2
HPS4-208ENST00000464362 JOSD1Q15040 202 aaPredicted RBP7.53□□□□□ -1.2
HPS4-208ENST00000464362 TIMM23BQ5SRD1 257 aa7.53□□□□□ -1.2
HPS4-208ENST00000464362 DTX1Q86Y01 620 aa7.53□□□□□ -1.2
HPS4-208ENST00000464362 ZCCHC14Q8WYQ9 949 aaKnown RBP7.53□□□□□ -1.2
HPS4-208ENST00000464362 GGTLC1Q9BX51 225 aa7.53□□□□□ -1.2
HPS4-208ENST00000464362 IGHV1-18A0A0C4DH31 117 aa7.53□□□□□ -1.2
HPS4-208ENST00000464362 A6NNC1 897 aa7.53□□□□□ -1.2
HPS4-208ENST00000464362 LGALS7P47929 136 aa7.53□□□□□ -1.2
HPS4-208ENST00000464362 PAX9P55771 341 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms