RNA–Protein interactions for RNA: ENST00000464053.1

GYPC-205, Transcript of glycophorin C (Gerbich blood group), humanhuman

TSL 1 (best)

Gene GYPC, Length 1,805 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPC-205ENST00000464053 OR1P1Q8NH06 330 aa12.17□□□□□ -0.46
GYPC-205ENST00000464053 SCGB1C1Q8TD33 95 aa12.17□□□□□ -0.46
GYPC-205ENST00000464053 TAF15Q92804 592 aaKnown RBP eCLIP12.17□□□□□ -0.46
GYPC-205ENST00000464053 GGACTQ9BVM4 153 aa12.17□□□□□ -0.46
GYPC-205ENST00000464053 WNT10AQ9GZT5 417 aa12.17□□□□□ -0.46
GYPC-205ENST00000464053 RPS10-NUDT3A0A1W2PQS6 291 aa12.16□□□□□ -0.46
GYPC-205ENST00000464053 HOXA3O43365 443 aaPredicted RBP12.16□□□□□ -0.46
GYPC-205ENST00000464053 IGHV3-48P01763 117 aa12.16□□□□□ -0.46
GYPC-205ENST00000464053 PRH1P02810 166 aa12.16□□□□□ -0.46
GYPC-205ENST00000464053 SRP14P37108 136 aaKnown RBP12.16□□□□□ -0.46
GYPC-205ENST00000464053 CD69Q07108 199 aa12.16□□□□□ -0.46
GYPC-205ENST00000464053 TREML4Q6UXN2 200 aa12.16□□□□□ -0.46
GYPC-205ENST00000464053 Q6ZS46 218 aa12.16□□□□□ -0.46
GYPC-205ENST00000464053 SIGLECL1Q8N7X8 197 aa12.16□□□□□ -0.46
GYPC-205ENST00000464053 MISP3Q96FF7 219 aa12.16□□□□□ -0.46
GYPC-205ENST00000464053 PARD6GQ9BYG4 376 aaPredicted RBP12.16□□□□□ -0.46
GYPC-205ENST00000464053 CRYGCP07315 174 aa12.16□□□□□ -0.46
GYPC-205ENST00000464053 SEC11BP0C7V7 166 aa12.16□□□□□ -0.46
GYPC-205ENST00000464053 FAM157CP0CG43 387 aa12.16□□□□□ -0.46
GYPC-205ENST00000464053 FGF7P21781 194 aa12.16□□□□□ -0.46
GYPC-205ENST00000464053 C9orf152Q5JTZ5 239 aa12.16□□□□□ -0.46
GYPC-205ENST00000464053 TTC9CQ8N5M4 171 aa12.16□□□□□ -0.46
GYPC-205ENST00000464053 TEX29Q8N6K0 151 aa12.16□□□□□ -0.46
GYPC-205ENST00000464053 OR5T1Q8NG75 326 aa12.16□□□□□ -0.46
GYPC-205ENST00000464053 OR2T6Q8NHC8 308 aa12.16□□□□□ -0.46
GYPC-205ENST00000464053 SGMS2Q8NHU3 365 aa12.16□□□□□ -0.46
GYPC-205ENST00000464053 RNASEH2CQ8TDP1 164 aaKnown RBP12.16□□□□□ -0.46
GYPC-205ENST00000464053 WDR83OSQ9Y284 106 aa12.16□□□□□ -0.46
GYPC-205ENST00000464053 IGHV3-21A0A0B4J1V1 117 aa12.15□□□□□ -0.46
GYPC-205ENST00000464053 NPIPB5A8MRT5 1133 aa12.15□□□□□ -0.46
GYPC-205ENST00000464053 LY6G6DO95868 133 aa12.15□□□□□ -0.46
GYPC-205ENST00000464053 OPRK1P41145 380 aa12.15□□□□□ -0.46
GYPC-205ENST00000464053 GAMTQ14353 236 aa12.15□□□□□ -0.46
GYPC-205ENST00000464053 ECSCRQ19T08 205 aa12.15□□□□□ -0.46
GYPC-205ENST00000464053 BTNL8Q6UX41 500 aa12.15□□□□□ -0.46
GYPC-205ENST00000464053 SLC16A13Q7RTY0 426 aa12.15□□□□□ -0.46
GYPC-205ENST00000464053 C16orf82Q7Z2V1 217 aa12.15□□□□□ -0.46
GYPC-205ENST00000464053 OR2G3Q8NGZ4 309 aa12.15□□□□□ -0.46
GYPC-205ENST00000464053 OR5R1Q8NH85 324 aa12.15□□□□□ -0.46
GYPC-205ENST00000464053 GNPNAT1Q96EK6 184 aaPredicted RBP12.15□□□□□ -0.46
GYPC-205ENST00000464053 MRPL36Q9P0J6 103 aaKnown RBP12.15□□□□□ -0.46
GYPC-205ENST00000464053 G3V318 75 aa12.14□□□□□ -0.47
GYPC-205ENST00000464053 M0QZK8 103 aa12.14□□□□□ -0.47
GYPC-205ENST00000464053 NMBP08949 121 aa12.14□□□□□ -0.47
GYPC-205ENST00000464053 DEFA4P12838 97 aa12.14□□□□□ -0.47
GYPC-205ENST00000464053 EIF5AL1Q6IS14 154 aaKnown RBP12.14□□□□□ -0.47
GYPC-205ENST00000464053 TMEM182Q6ZP80 229 aaPredicted RBP12.14□□□□□ -0.47
GYPC-205ENST00000464053 NPCDR1Q9BY65 106 aa12.14□□□□□ -0.47
GYPC-205ENST00000464053 NPVFQ9HCQ7 196 aa12.14□□□□□ -0.47
GYPC-205ENST00000464053 LINC00527Q9UJ94 153 aa12.14□□□□□ -0.47
GYPC-205ENST00000464053 VPREB3Q9UKI3 123 aa12.14□□□□□ -0.47
GYPC-205ENST00000464053 GPX4P36969 197 aaPredicted RBP12.14□□□□□ -0.47
GYPC-205ENST00000464053 AKR1C1Q04828 323 aa12.14□□□□□ -0.47
GYPC-205ENST00000464053 UNQ5815/PRO19632Q6UWF5 114 aa12.14□□□□□ -0.47
GYPC-205ENST00000464053 TMUB1Q9BVT8 246 aa12.14□□□□□ -0.47
GYPC-205ENST00000464053 LSM4Q9Y4Z0 139 aaKnown RBP12.14□□□□□ -0.47
GYPC-205ENST00000464053 IGKV1OR2-108A0A075B7D4 117 aa12.13□□□□□ -0.47
GYPC-205ENST00000464053 BTBD17A6NE02 478 aa12.13□□□□□ -0.47
GYPC-205ENST00000464053 MT-CO2P00403 227 aa12.13□□□□□ -0.47
GYPC-205ENST00000464053 SULT1A2P50226 295 aa12.13□□□□□ -0.47
GYPC-205ENST00000464053 CLLU1Q5K131 121 aa12.13□□□□□ -0.47
GYPC-205ENST00000464053 CACNG8Q8WXS5 425 aa12.13□□□□□ -0.47
GYPC-205ENST00000464053 FANCD2OSQ96PS1 177 aa12.13□□□□□ -0.47
GYPC-205ENST00000464053 DUX5Q96PT3 197 aa12.13□□□□□ -0.47
GYPC-205ENST00000464053 MGST2Q99735 147 aa12.13□□□□□ -0.47
GYPC-205ENST00000464053 FNDC10F2Z333 226 aa12.12□□□□□ -0.47
GYPC-205ENST00000464053 IGHG2P01859 326 aa12.12□□□□□ -0.47
GYPC-205ENST00000464053 FHITP49789 147 aa12.12□□□□□ -0.47
GYPC-205ENST00000464053 CENPVQ7Z7K6 275 aaPredicted RBP12.12□□□□□ -0.47
GYPC-205ENST00000464053 RNF141Q8WVD5 230 aa12.12□□□□□ -0.47
GYPC-205ENST00000464053 ACY3Q96HD9 319 aa12.12□□□□□ -0.47
GYPC-205ENST00000464053 PSMG3Q9BT73 122 aaPredicted RBP12.12□□□□□ -0.47
GYPC-205ENST00000464053 SETXQ7Z333 2677 aaKnown RBP12.12□□□□□ -0.47
GYPC-205ENST00000464053 HIVEP1P15822 2718 aa12.12□□□□□ -0.47
GYPC-205ENST00000464053 IGLV11-55A0A075B6I3 123 aa12.11□□□□□ -0.47
GYPC-205ENST00000464053 I3L2K1 104 aa12.11□□□□□ -0.47
GYPC-205ENST00000464053 RAB14P61106 215 aa12.11□□□□□ -0.47
GYPC-205ENST00000464053 DEFA5Q01523 94 aa12.11□□□□□ -0.47
GYPC-205ENST00000464053 TMEM144Q7Z5S9 345 aa12.11□□□□□ -0.47
GYPC-205ENST00000464053 SLC35E3Q7Z769 313 aa12.11□□□□□ -0.47
GYPC-205ENST00000464053 FAM110DQ8TAY7 271 aaPredicted RBP12.11□□□□□ -0.47
GYPC-205ENST00000464053 SLC35E1Q96K37 410 aa12.11□□□□□ -0.47
GYPC-205ENST00000464053 CXorf58Q96LI9 332 aa12.11□□□□□ -0.47
GYPC-205ENST00000464053 VSIRQ9H7M9 311 aa12.11□□□□□ -0.47
GYPC-205ENST00000464053 K7EIM0 57 aa12.11□□□□□ -0.47
GYPC-205ENST00000464053 CORTO00230 105 aa12.11□□□□□ -0.47
GYPC-205ENST00000464053 SOX15O60248 233 aa12.11□□□□□ -0.47
GYPC-205ENST00000464053 HNF1AP20823 631 aa12.11□□□□□ -0.47
GYPC-205ENST00000464053 AKIRIN2Q53H80 203 aa12.11□□□□□ -0.47
GYPC-205ENST00000464053 C19orf54Q5BKX5 351 aa12.11□□□□□ -0.47
GYPC-205ENST00000464053 ACSM6Q6P461 480 aa12.11□□□□□ -0.47
GYPC-205ENST00000464053 TEPPQ6URK8 271 aa12.11□□□□□ -0.47
GYPC-205ENST00000464053 SLC7A5P1Q8MH63 180 aa12.11□□□□□ -0.47
GYPC-205ENST00000464053 NPIPB3Q92617 1050 aa12.11□□□□□ -0.47
GYPC-205ENST00000464053 NOL4LQ96MY1 436 aaPredicted RBP12.11□□□□□ -0.47
GYPC-205ENST00000464053 GGTLC1Q9BX51 225 aa12.11□□□□□ -0.47
GYPC-205ENST00000464053 TMEM160Q9NX00 188 aa12.11□□□□□ -0.47
GYPC-205ENST00000464053 TIMM9Q9Y5J7 89 aa12.11□□□□□ -0.47
GYPC-205ENST00000464053 TRAV41A0A0B4J266 112 aa12.1□□□□□ -0.47
GYPC-205ENST00000464053 ZNF705EA8MWA4 302 aaPredicted RBP12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms