RNA–Protein interactions for RNA: ENST00000463526.1

CMSS1-202, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 3

Gene CMSS1, Length 397 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-202ENST00000463526 OR10C1Q96KK4 312 aa11.21□□□□□ -0.61
CMSS1-202ENST00000463526 TSC22D3Q99576 134 aa11.21□□□□□ -0.61
CMSS1-202ENST00000463526 NXF2Q9GZY0 626 aaKnown RBP11.21□□□□□ -0.61
CMSS1-202ENST00000463526 ST8SIA3O43173 380 aa11.2□□□□□ -0.62
CMSS1-202ENST00000463526 APOHP02749 345 aaPredicted RBP11.2□□□□□ -0.62
CMSS1-202ENST00000463526 HRH1P35367 487 aa11.2□□□□□ -0.62
CMSS1-202ENST00000463526 TMEM187Q14656 261 aa11.2□□□□□ -0.62
CMSS1-202ENST00000463526 TOMM20LQ6UXN7 152 aa11.2□□□□□ -0.62
CMSS1-202ENST00000463526 H2BFWTQ7Z2G1 175 aa11.2□□□□□ -0.62
CMSS1-202ENST00000463526 SAMD12Q8N8I0 201 aa11.2□□□□□ -0.62
CMSS1-202ENST00000463526 C2CD4CQ8TF44 421 aa11.2□□□□□ -0.62
CMSS1-202ENST00000463526 TXN2Q99757 166 aa11.2□□□□□ -0.62
CMSS1-202ENST00000463526 YTHDF1Q9BYJ9 559 aaKnown RBP11.2□□□□□ -0.62
CMSS1-202ENST00000463526 C11orf68Q9H3H3 251 aaKnown RBP11.2□□□□□ -0.62
CMSS1-202ENST00000463526 IGLL5B9A064 214 aa11.19□□□□□ -0.62
CMSS1-202ENST00000463526 DFFBO76075 338 aa11.19□□□□□ -0.62
CMSS1-202ENST00000463526 TSPAN5P62079 268 aa11.19□□□□□ -0.62
CMSS1-202ENST00000463526 UBE2NLQ5JXB2 153 aa11.19□□□□□ -0.62
CMSS1-202ENST00000463526 TBC1D26Q86UD7 250 aa11.19□□□□□ -0.62
CMSS1-202ENST00000463526 LYSMD2Q8IV50 215 aa11.19□□□□□ -0.62
CMSS1-202ENST00000463526 CADM3Q8N126 398 aa11.19□□□□□ -0.62
CMSS1-202ENST00000463526 GINS3Q9BRX5 216 aa11.19□□□□□ -0.62
CMSS1-202ENST00000463526 MS4A6AQ9H2W1 248 aa11.19□□□□□ -0.62
CMSS1-202ENST00000463526 Q9H521 79 aa11.19□□□□□ -0.62
CMSS1-202ENST00000463526 ANAPC10Q9UM13 185 aa11.19□□□□□ -0.62
CMSS1-202ENST00000463526 IGKV1-39P01597 117 aa11.18□□□□□ -0.62
CMSS1-202ENST00000463526 IGKV1D-39P04432 117 aa11.18□□□□□ -0.62
CMSS1-202ENST00000463526 NAT1P18440 290 aa11.18□□□□□ -0.62
CMSS1-202ENST00000463526 S100GP29377 79 aa11.18□□□□□ -0.62
CMSS1-202ENST00000463526 PRSS3P35030 304 aa11.18□□□□□ -0.62
CMSS1-202ENST00000463526 HSPE1P61604 102 aaKnown RBP11.18□□□□□ -0.62
CMSS1-202ENST00000463526 ERHP84090 104 aaKnown RBP11.18□□□□□ -0.62
CMSS1-202ENST00000463526 PRCDQ00LT1 54 aa11.18□□□□□ -0.62
CMSS1-202ENST00000463526 IZUMO4Q1ZYL8 232 aa11.18□□□□□ -0.62
CMSS1-202ENST00000463526 FAM24BQ8N5W8 94 aa11.18□□□□□ -0.62
CMSS1-202ENST00000463526 MRGPRFQ96AM1 343 aa11.18□□□□□ -0.62
CMSS1-202ENST00000463526 SEC22AQ96IW7 307 aa11.18□□□□□ -0.62
CMSS1-202ENST00000463526 RABAC1Q9UI14 185 aa11.18□□□□□ -0.62
CMSS1-202ENST00000463526 PUS1Q9Y606 427 aaKnown RBP eCLIP11.18□□□□□ -0.62
CMSS1-202ENST00000463526 RPS19P39019 145 aaKnown RBP11.17□□□□□ -0.62
CMSS1-202ENST00000463526 LSM3P62310 102 aaKnown RBP11.17□□□□□ -0.62
CMSS1-202ENST00000463526 STHQ8IWL8 128 aa11.17□□□□□ -0.62
CMSS1-202ENST00000463526 DUSP18Q8NEJ0 188 aa11.17□□□□□ -0.62
CMSS1-202ENST00000463526 NPBWR1P48145 328 aa11.16□□□□□ -0.62
CMSS1-202ENST00000463526 LPCAT3Q6P1A2 487 aa11.16□□□□□ -0.62
CMSS1-202ENST00000463526 CROCCP3Q8IVE0 287 aa11.16□□□□□ -0.62
CMSS1-202ENST00000463526 ZNF114Q8NC26 417 aa11.16□□□□□ -0.62
CMSS1-202ENST00000463526 VSIRQ9H7M9 311 aa11.16□□□□□ -0.62
CMSS1-202ENST00000463526 APLNQ9ULZ1 77 aa11.16□□□□□ -0.62
CMSS1-202ENST00000463526 DNAH6Q9C0G6 4158 aa11.16□□□□□ -0.62
CMSS1-202ENST00000463526 A0A1B0GU03 582 aa11.15□□□□□ -0.62
CMSS1-202ENST00000463526 TMEM127O75204 238 aa11.15□□□□□ -0.62
CMSS1-202ENST00000463526 ATP6V1G2O95670 118 aa11.15□□□□□ -0.62
CMSS1-202ENST00000463526 CD5P06127 495 aa11.15□□□□□ -0.62
CMSS1-202ENST00000463526 SNCAP37840 140 aa11.15□□□□□ -0.62
CMSS1-202ENST00000463526 ZNF600Q6ZNG1 722 aa11.15□□□□□ -0.62
CMSS1-202ENST00000463526 STXBP6Q8NFX7 210 aa11.15□□□□□ -0.62
CMSS1-202ENST00000463526 ZFAND3Q9H8U3 227 aa11.15□□□□□ -0.62
CMSS1-202ENST00000463526 KIAA1109Q2LD37 5005 aa11.14□□□□□ -0.63
CMSS1-202ENST00000463526 IGHV4-28A0A0C4DH34 117 aa11.14□□□□□ -0.63
CMSS1-202ENST00000463526 KNCNA6PVL3 124 aa11.14□□□□□ -0.63
CMSS1-202ENST00000463526 TMEM50AO95807 157 aa11.14□□□□□ -0.63
CMSS1-202ENST00000463526 RBMY1A1P0DJD3 496 aaKnown RBP11.14□□□□□ -0.63
CMSS1-202ENST00000463526 RBMY1CP0DJD4 496 aa11.14□□□□□ -0.63
CMSS1-202ENST00000463526 HLA-DMBP28068 263 aa11.14□□□□□ -0.63
CMSS1-202ENST00000463526 RBMY1FQ15415 496 aaKnown RBP11.14□□□□□ -0.63
CMSS1-202ENST00000463526 SNX29P2Q8IUI4 249 aa11.14□□□□□ -0.63
CMSS1-202ENST00000463526 SLC35G3Q8N808 338 aa11.14□□□□□ -0.63
CMSS1-202ENST00000463526 Q8NAQ8 132 aa11.14□□□□□ -0.63
CMSS1-202ENST00000463526 GPX8Q8TED1 209 aa11.14□□□□□ -0.63
CMSS1-202ENST00000463526 FAM212BQ9NTI7 297 aaPredicted RBP11.14□□□□□ -0.63
CMSS1-202ENST00000463526 M0QYG6 137 aa11.13□□□□□ -0.63
CMSS1-202ENST00000463526 IFNA17P01571 189 aa11.13□□□□□ -0.63
CMSS1-202ENST00000463526 GIG44P09565 113 aaPredicted RBP11.13□□□□□ -0.63
CMSS1-202ENST00000463526 PGAM2P15259 253 aa11.13□□□□□ -0.63
CMSS1-202ENST00000463526 PI3P19957 117 aa11.13□□□□□ -0.63
CMSS1-202ENST00000463526 NPPCP23582 126 aa11.13□□□□□ -0.63
CMSS1-202ENST00000463526 PPP5CP53041 499 aa11.13□□□□□ -0.63
CMSS1-202ENST00000463526 TCTAP57738 103 aa11.13□□□□□ -0.63
CMSS1-202ENST00000463526 MLANAQ16655 118 aa11.13□□□□□ -0.63
CMSS1-202ENST00000463526 TMEM231Q9H6L2 316 aa11.13□□□□□ -0.63
CMSS1-202ENST00000463526 CLEC5AQ9NY25 188 aa11.13□□□□□ -0.63
CMSS1-202ENST00000463526 COMMD3Q9UBI1 195 aa11.13□□□□□ -0.63
CMSS1-202ENST00000463526 SMIM31A0A1B0GVY4 71 aa11.12□□□□□ -0.63
CMSS1-202ENST00000463526 C11orf94C9JXX5 98 aa11.12□□□□□ -0.63
CMSS1-202ENST00000463526 ZNF688P0C7X2 276 aa11.12□□□□□ -0.63
CMSS1-202ENST00000463526 ETV6P41212 452 aa11.12□□□□□ -0.63
CMSS1-202ENST00000463526 RNASE12Q5GAN4 147 aaKnown RBP11.12□□□□□ -0.63
CMSS1-202ENST00000463526 TMEM230Q96A57 120 aa11.12□□□□□ -0.63
CMSS1-202ENST00000463526 MRPL36Q9P0J6 103 aaKnown RBP11.12□□□□□ -0.63
CMSS1-202ENST00000463526 HECTD4Q9Y4D8 3996 aa11.12□□□□□ -0.63
CMSS1-202ENST00000463526 TRAV2A0A0B4J234 112 aa11.11□□□□□ -0.63
CMSS1-202ENST00000463526 A0A0B4J293 547 aa11.11□□□□□ -0.63
CMSS1-202ENST00000463526 A0A1W2PS18 150 aa11.11□□□□□ -0.63
CMSS1-202ENST00000463526 IGKV1-5P01602 117 aa11.11□□□□□ -0.63
CMSS1-202ENST00000463526 C4BPBP20851 252 aa11.11□□□□□ -0.63
CMSS1-202ENST00000463526 HOXA1P49639 335 aaPredicted RBP11.11□□□□□ -0.63
CMSS1-202ENST00000463526 AKR1C2P52895 323 aa11.11□□□□□ -0.63
CMSS1-202ENST00000463526 UCP3P55916 312 aa11.11□□□□□ -0.63
CMSS1-202ENST00000463526 ACTL10Q5JWF8 245 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms