RNA–Protein interactions for RNA: ENST00000462548.6

RPRD1B-203, Transcript of regulation of nuclear pre-mRNA domain containing 1B, humanhuman

TSL 5

Gene RPRD1B, Length 2,436 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1B-203ENST00000462548 ACTL6BO94805 426 aa11.92□□□□□ -0.5
RPRD1B-203ENST00000462548 FAM106CPP0CH98 169 aa11.92□□□□□ -0.5
RPRD1B-203ENST00000462548 BRS3P32247 399 aa11.92□□□□□ -0.5
RPRD1B-203ENST00000462548 MLANAQ16655 118 aa11.92□□□□□ -0.5
RPRD1B-203ENST00000462548 ARSJQ5FYB0 599 aaPredicted RBP11.92□□□□□ -0.5
RPRD1B-203ENST00000462548 SCGB1C1Q8TD33 95 aa11.92□□□□□ -0.5
RPRD1B-203ENST00000462548 SRSF12Q8WXF0 261 aaKnown RBP11.92□□□□□ -0.5
RPRD1B-203ENST00000462548 P2RX4Q99571 388 aa11.92□□□□□ -0.5
RPRD1B-203ENST00000462548 PARD6GQ9BYG4 376 aaPredicted RBP11.92□□□□□ -0.5
RPRD1B-203ENST00000462548 NKX6-2Q9C056 277 aaPredicted RBP11.92□□□□□ -0.5
RPRD1B-203ENST00000462548 ZNF705EA8MWA4 302 aaPredicted RBP11.92□□□□□ -0.5
RPRD1B-203ENST00000462548 SNCAP37840 140 aa11.92□□□□□ -0.5
RPRD1B-203ENST00000462548 ERHP84090 104 aaKnown RBP11.92□□□□□ -0.5
RPRD1B-203ENST00000462548 Q8N9W7 124 aa11.92□□□□□ -0.5
RPRD1B-203ENST00000462548 C2CD4CQ8TF44 421 aa11.92□□□□□ -0.5
RPRD1B-203ENST00000462548 GNPNAT1Q96EK6 184 aaPredicted RBP11.92□□□□□ -0.5
RPRD1B-203ENST00000462548 MEGF9Q9H1U4 602 aa11.92□□□□□ -0.5
RPRD1B-203ENST00000462548 NIT2Q9NQR4 276 aa11.92□□□□□ -0.5
RPRD1B-203ENST00000462548 DLK1P80370 383 aa11.91□□□□□ -0.5
RPRD1B-203ENST00000462548 FBXO7Q9Y3I1 522 aa11.91□□□□□ -0.5
RPRD1B-203ENST00000462548 SMIM6P0DI80 62 aa11.91□□□□□ -0.5
RPRD1B-203ENST00000462548 FGF7P21781 194 aa11.91□□□□□ -0.5
RPRD1B-203ENST00000462548 MFAP2P55001 183 aa11.91□□□□□ -0.5
RPRD1B-203ENST00000462548 NDPQ00604 133 aa11.91□□□□□ -0.5
RPRD1B-203ENST00000462548 RBMS3Q6XE24 437 aaKnown RBP11.91□□□□□ -0.5
RPRD1B-203ENST00000462548 FAM103A1Q9BTL3 118 aaKnown RBP11.91□□□□□ -0.5
RPRD1B-203ENST00000462548 WDR83OSQ9Y284 106 aa11.91□□□□□ -0.5
RPRD1B-203ENST00000462548 J3QLI3 93 aa11.9□□□□□ -0.5
RPRD1B-203ENST00000462548 TREML4Q6UXN2 200 aa11.9□□□□□ -0.5
RPRD1B-203ENST00000462548 SSMEM1Q8WWF3 244 aa11.9□□□□□ -0.5
RPRD1B-203ENST00000462548 VSIRQ9H7M9 311 aa11.9□□□□□ -0.5
RPRD1B-203ENST00000462548 SMCO3A2RU48 225 aa11.9□□□□□ -0.5
RPRD1B-203ENST00000462548 SCAF4O95104 1147 aaKnown RBP11.9□□□□□ -0.5
RPRD1B-203ENST00000462548 CNIH1O95406 144 aa11.9□□□□□ -0.5
RPRD1B-203ENST00000462548 CX3CL1P78423 397 aa11.9□□□□□ -0.5
RPRD1B-203ENST00000462548 FXYD3Q14802 87 aa11.9□□□□□ -0.5
RPRD1B-203ENST00000462548 BTNL8Q6UX41 500 aa11.9□□□□□ -0.5
RPRD1B-203ENST00000462548 Q6ZRG5 221 aa11.9□□□□□ -0.5
RPRD1B-203ENST00000462548 GGACTQ9BVM4 153 aa11.9□□□□□ -0.5
RPRD1B-203ENST00000462548 MDFIC2A0A1B0GVS7 189 aa11.89□□□□□ -0.51
RPRD1B-203ENST00000462548 TMEM88Q6PEY1 159 aa11.89□□□□□ -0.51
RPRD1B-203ENST00000462548 TMEM219Q86XT9 240 aa11.89□□□□□ -0.51
RPRD1B-203ENST00000462548 BCL6BQ8N143 479 aaPredicted RBP11.89□□□□□ -0.51
RPRD1B-203ENST00000462548 EIF4E3Q8N5X7 224 aaKnown RBP11.89□□□□□ -0.51
RPRD1B-203ENST00000462548 OR51M1Q9H341 326 aa11.89□□□□□ -0.51
RPRD1B-203ENST00000462548 DMRT1Q9Y5R6 373 aa11.89□□□□□ -0.51
RPRD1B-203ENST00000462548 AKAP9Q99996 3911 aa11.89□□□□□ -0.51
RPRD1B-203ENST00000462548 ATP5IP56385 69 aaPredicted RBP11.89□□□□□ -0.51
RPRD1B-203ENST00000462548 SAT2Q96F10 170 aaPredicted RBP11.89□□□□□ -0.51
RPRD1B-203ENST00000462548 SSX3Q99909 188 aa11.89□□□□□ -0.51
RPRD1B-203ENST00000462548 PSMG3Q9BT73 122 aaPredicted RBP11.89□□□□□ -0.51
RPRD1B-203ENST00000462548 NPCDR1Q9BY65 106 aa11.89□□□□□ -0.51
RPRD1B-203ENST00000462548 FNDC4Q9H6D8 234 aaPredicted RBP11.89□□□□□ -0.51
RPRD1B-203ENST00000462548 SH2D7A6NKC9 451 aaPredicted RBP11.88□□□□□ -0.51
RPRD1B-203ENST00000462548 FSHBP01225 129 aa11.88□□□□□ -0.51
RPRD1B-203ENST00000462548 PVRIGQ6DKI7 326 aa11.88□□□□□ -0.51
RPRD1B-203ENST00000462548 CENPVQ7Z7K6 275 aaPredicted RBP11.88□□□□□ -0.51
RPRD1B-203ENST00000462548 ZFP82Q8N141 532 aa11.88□□□□□ -0.51
RPRD1B-203ENST00000462548 FAM96BQ9Y3D0 163 aa11.88□□□□□ -0.51
RPRD1B-203ENST00000462548 TEX15Q9BXT5 2789 aa11.88□□□□□ -0.51
RPRD1B-203ENST00000462548 IGHV7-81A0A0B4J1V7 117 aa11.88□□□□□ -0.51
RPRD1B-203ENST00000462548 RELQ04864 619 aaPredicted RBP11.88□□□□□ -0.51
RPRD1B-203ENST00000462548 CD69Q07108 199 aa11.88□□□□□ -0.51
RPRD1B-203ENST00000462548 ASPHD1Q5U4P2 390 aa11.88□□□□□ -0.51
RPRD1B-203ENST00000462548 ACSM6Q6P461 480 aa11.88□□□□□ -0.51
RPRD1B-203ENST00000462548 ZNF562Q6V9R5 426 aa11.88□□□□□ -0.51
RPRD1B-203ENST00000462548 ZNF114Q8NC26 417 aa11.88□□□□□ -0.51
RPRD1B-203ENST00000462548 FAM213BQ8TBF2 198 aa11.88□□□□□ -0.51
RPRD1B-203ENST00000462548 MGST2Q99735 147 aa11.88□□□□□ -0.51
RPRD1B-203ENST00000462548 FOXC2Q99958 501 aa11.88□□□□□ -0.51
RPRD1B-203ENST00000462548 HSPB9Q9BQS6 159 aa11.88□□□□□ -0.51
RPRD1B-203ENST00000462548 PARP11Q9NR21 331 aa11.88□□□□□ -0.51
RPRD1B-203ENST00000462548 LSM4Q9Y4Z0 139 aaKnown RBP11.88□□□□□ -0.51
RPRD1B-203ENST00000462548 SMAD7O15105 426 aaKnown RBP11.87□□□□□ -0.51
RPRD1B-203ENST00000462548 PRH1P02810 166 aa11.87□□□□□ -0.51
RPRD1B-203ENST00000462548 EGR2P11161 476 aaPredicted RBP11.87□□□□□ -0.51
RPRD1B-203ENST00000462548 CAMLGP49069 296 aa11.87□□□□□ -0.51
RPRD1B-203ENST00000462548 ELLP55199 621 aaPredicted RBP11.87□□□□□ -0.51
RPRD1B-203ENST00000462548 CYB5R2Q6BCY4 276 aa11.87□□□□□ -0.51
RPRD1B-203ENST00000462548 ABHD5Q8WTS1 349 aa11.87□□□□□ -0.51
RPRD1B-203ENST00000462548 C22orf15Q8WYQ4 148 aa11.87□□□□□ -0.51
RPRD1B-203ENST00000462548 HRH4Q9H3N8 390 aa11.87□□□□□ -0.51
RPRD1B-203ENST00000462548 C1RLQ9NZP8 487 aa11.87□□□□□ -0.51
RPRD1B-203ENST00000462548 MRPL36Q9P0J6 103 aaKnown RBP11.87□□□□□ -0.51
RPRD1B-203ENST00000462548 TIMM9Q9Y5J7 89 aa11.87□□□□□ -0.51
RPRD1B-203ENST00000462548 IGHV3-48P01763 117 aa11.87□□□□□ -0.51
RPRD1B-203ENST00000462548 S100A9P06702 114 aaKnown RBP11.87□□□□□ -0.51
RPRD1B-203ENST00000462548 FBP1P09467 338 aa11.87□□□□□ -0.51
RPRD1B-203ENST00000462548 S100PP25815 95 aa11.87□□□□□ -0.51
RPRD1B-203ENST00000462548 GAMTQ14353 236 aa11.87□□□□□ -0.51
RPRD1B-203ENST00000462548 C21orf62-AS1Q17RA5 79 aa11.87□□□□□ -0.51
RPRD1B-203ENST00000462548 OR2T6Q8NHC8 308 aa11.87□□□□□ -0.51
RPRD1B-203ENST00000462548 ARPC1AQ92747 370 aa11.87□□□□□ -0.51
RPRD1B-203ENST00000462548 NPVFQ9HCQ7 196 aa11.87□□□□□ -0.51
RPRD1B-203ENST00000462548 RPRMQ9NS64 109 aa11.87□□□□□ -0.51
RPRD1B-203ENST00000462548 F11RQ9Y624 299 aaKnown RBP11.87□□□□□ -0.51
RPRD1B-203ENST00000462548 IGKV1OR2-108A0A075B7D4 117 aa11.86□□□□□ -0.51
RPRD1B-203ENST00000462548 UMAD1C9J7I0 102 aa11.86□□□□□ -0.51
RPRD1B-203ENST00000462548 H3BUX3 64 aa11.86□□□□□ -0.51
RPRD1B-203ENST00000462548 RAB5CP51148 216 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms