RNA–Protein interactions for RNA: ENST00000461608.1

HDAC6-212, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-212ENST00000461608 RBM7Q9Y580 266 aaKnown RBP1.23□□□□□ -2.21
HDAC6-212ENST00000461608 SLX4Q8IY92 1834 aa1.23□□□□□ -2.21
HDAC6-212ENST00000461608 ARAP1Q96P48 1450 aa1.23□□□□□ -2.21
HDAC6-212ENST00000461608 IFT140Q96RY7 1462 aa1.23□□□□□ -2.21
HDAC6-212ENST00000461608 FANCD2Q9BXW9 1451 aa1.23□□□□□ -2.21
HDAC6-212ENST00000461608 ADAMTS7Q9UKP4 1686 aa1.23□□□□□ -2.21
HDAC6-212ENST00000461608 URB2Q14146 1524 aaKnown RBP1.22□□□□□ -2.21
HDAC6-212ENST00000461608 FAM159BA6NKW6 160 aa1.22□□□□□ -2.21
HDAC6-212ENST00000461608 H3BT86 120 aa1.22□□□□□ -2.21
HDAC6-212ENST00000461608 OR2B3O76000 313 aa1.22□□□□□ -2.21
HDAC6-212ENST00000461608 OR7C1O76099 320 aaPredicted RBP1.22□□□□□ -2.21
HDAC6-212ENST00000461608 IFNA1P01562 189 aa1.22□□□□□ -2.21
HDAC6-212ENST00000461608 IFNA10P01566 189 aa1.22□□□□□ -2.21
HDAC6-212ENST00000461608 METTL15P1P0C7V9 234 aa1.22□□□□□ -2.21
HDAC6-212ENST00000461608 KRTAP12-1P59990 96 aa1.22□□□□□ -2.21
HDAC6-212ENST00000461608 RPS20P60866 119 aaKnown RBP1.22□□□□□ -2.21
HDAC6-212ENST00000461608 GNG3P63215 75 aa1.22□□□□□ -2.21
HDAC6-212ENST00000461608 HES1Q14469 280 aa1.22□□□□□ -2.21
HDAC6-212ENST00000461608 POU6F1Q14863 301 aa1.22□□□□□ -2.21
HDAC6-212ENST00000461608 Q6ZS49 121 aa1.22□□□□□ -2.21
HDAC6-212ENST00000461608 SLC36A1Q7Z2H8 476 aa1.22□□□□□ -2.21
HDAC6-212ENST00000461608 KTN1-AS1Q86SY8 53 aa1.22□□□□□ -2.21
HDAC6-212ENST00000461608 ST6GALNAC3Q8NDV1 305 aa1.22□□□□□ -2.21
HDAC6-212ENST00000461608 OR51T1Q8NGJ9 327 aa1.22□□□□□ -2.21
HDAC6-212ENST00000461608 OR13C4Q8NGS5 318 aa1.22□□□□□ -2.21
HDAC6-212ENST00000461608 OR13D1Q8NGV5 346 aa1.22□□□□□ -2.21
HDAC6-212ENST00000461608 MCFD2Q8NI22 146 aa1.22□□□□□ -2.21
HDAC6-212ENST00000461608 MAFIPQ8WZ33 124 aa1.22□□□□□ -2.21
HDAC6-212ENST00000461608 BTF3L4Q96K17 158 aa1.22□□□□□ -2.21
HDAC6-212ENST00000461608 TRIM4Q9C037 500 aa1.22□□□□□ -2.21
HDAC6-212ENST00000461608 C20orf27Q9GZN8 174 aa1.22□□□□□ -2.21
HDAC6-212ENST00000461608 WDR61Q9GZS3 305 aaKnown RBP1.22□□□□□ -2.21
HDAC6-212ENST00000461608 EFCAB1Q9HAE3 211 aa1.22□□□□□ -2.21
HDAC6-212ENST00000461608 CISHQ9NSE2 258 aa1.22□□□□□ -2.21
HDAC6-212ENST00000461608 MED29Q9NX70 200 aa1.22□□□□□ -2.21
HDAC6-212ENST00000461608 TAS2R7Q9NYW3 318 aa1.22□□□□□ -2.21
HDAC6-212ENST00000461608 MRPL27Q9P0M9 148 aaKnown RBP1.22□□□□□ -2.21
HDAC6-212ENST00000461608 NAT8Q9UHE5 227 aa1.22□□□□□ -2.21
HDAC6-212ENST00000461608 SMPXQ9UHP9 88 aa1.22□□□□□ -2.21
HDAC6-212ENST00000461608 PXDNLA1KZ92 1463 aa1.22□□□□□ -2.21
HDAC6-212ENST00000461608 CFTRP13569 1480 aa1.22□□□□□ -2.21
HDAC6-212ENST00000461608 WRNQ14191 1432 aaPredicted RBP eCLIP1.22□□□□□ -2.21
HDAC6-212ENST00000461608 ARHGAP32A7KAX9 2087 aa1.22□□□□□ -2.21
HDAC6-212ENST00000461608 KIF13AQ9H1H9 1805 aa1.22□□□□□ -2.21
HDAC6-212ENST00000461608 ROCK1Q13464 1354 aa1.21□□□□□ -2.21
HDAC6-212ENST00000461608 EIF3AQ14152 1382 aaKnown RBP1.21□□□□□ -2.21
HDAC6-212ENST00000461608 EIF4G3O43432 1585 aaKnown RBP1.21□□□□□ -2.22
HDAC6-212ENST00000461608 PCF11O94913 1555 aaKnown RBP1.21□□□□□ -2.22
HDAC6-212ENST00000461608 ABCC8Q09428 1581 aa1.21□□□□□ -2.22
HDAC6-212ENST00000461608 MROH2BQ7Z745 1585 aa1.21□□□□□ -2.22
HDAC6-212ENST00000461608 SCN9AQ15858 1988 aa1.21□□□□□ -2.22
HDAC6-212ENST00000461608 A0A0J9YY10 115 aa1.21□□□□□ -2.22
HDAC6-212ENST00000461608 TRBV10-2A0A0K0K1G8 114 aa1.21□□□□□ -2.22
HDAC6-212ENST00000461608 EXOC1LA0A1B0GW35 172 aa1.21□□□□□ -2.22
HDAC6-212ENST00000461608 A0A1B0GX78 115 aa1.21□□□□□ -2.22
HDAC6-212ENST00000461608 OR51F1A6NGY5 319 aa1.21□□□□□ -2.22
HDAC6-212ENST00000461608 HMSDA8MTL9 139 aa1.21□□□□□ -2.22
HDAC6-212ENST00000461608 FAAHO00519 579 aa1.21□□□□□ -2.22
HDAC6-212ENST00000461608 ARPC5O15511 151 aa1.21□□□□□ -2.22
HDAC6-212ENST00000461608 PDE6DO43924 150 aa1.21□□□□□ -2.22
HDAC6-212ENST00000461608 NAPSAO96009 420 aa1.21□□□□□ -2.22
HDAC6-212ENST00000461608 IGHV3-7P01780 117 aa1.21□□□□□ -2.22
HDAC6-212ENST00000461608 C1QCP02747 245 aa1.21□□□□□ -2.22
HDAC6-212ENST00000461608 HMGN1P05114 100 aa1.21□□□□□ -2.22
HDAC6-212ENST00000461608 NBEAP1P0C6P0 100 aa1.21□□□□□ -2.22
HDAC6-212ENST00000461608 SERPINB1P30740 379 aa1.21□□□□□ -2.22
HDAC6-212ENST00000461608 RAB4BP61018 213 aa1.21□□□□□ -2.22
HDAC6-212ENST00000461608 GNG5P63218 68 aa1.21□□□□□ -2.22
HDAC6-212ENST00000461608 HIST1H3AP68431 136 aa1.21□□□□□ -2.22
HDAC6-212ENST00000461608 S100A12P80511 92 aa1.21□□□□□ -2.22
HDAC6-212ENST00000461608 H3F3AP84243 136 aa1.21□□□□□ -2.22
HDAC6-212ENST00000461608 TPRXLQ17RH7 258 aa1.21□□□□□ -2.22
HDAC6-212ENST00000461608 IAH1Q2TAA2 248 aaPredicted RBP1.21□□□□□ -2.22
HDAC6-212ENST00000461608 LRRC28Q86X40 367 aaPredicted RBP1.21□□□□□ -2.22
HDAC6-212ENST00000461608 STX19Q8N4C7 294 aa1.21□□□□□ -2.22
HDAC6-212ENST00000461608 ANKRD29Q8N6D5 301 aa1.21□□□□□ -2.22
HDAC6-212ENST00000461608 C12orf29Q8N999 325 aa1.21□□□□□ -2.22
HDAC6-212ENST00000461608 OR51A2Q8NGJ7 313 aa1.21□□□□□ -2.22
HDAC6-212ENST00000461608 OR13C6PQ8NH95 151 aa1.21□□□□□ -2.22
HDAC6-212ENST00000461608 MRPL30Q8TCC3 161 aaKnown RBP1.21□□□□□ -2.22
HDAC6-212ENST00000461608 C11orf40Q8WZ69 217 aa1.21□□□□□ -2.22
HDAC6-212ENST00000461608 ZHX1-C8orf76Q96EF9 292 aa1.21□□□□□ -2.22
HDAC6-212ENST00000461608 BOLA2Q9H3K6 86 aa1.21□□□□□ -2.22
HDAC6-212ENST00000461608 CRCT1Q9UGL9 99 aa1.21□□□□□ -2.22
HDAC6-212ENST00000461608 SLC35A3Q9Y2D2 325 aa1.21□□□□□ -2.22
HDAC6-212ENST00000461608 TMEM56-RWDD3S4R434 201 aa1.21□□□□□ -2.22
HDAC6-212ENST00000461608 SIPA1L1O43166 1804 aa1.21□□□□□ -2.22
HDAC6-212ENST00000461608 WDR97A6NE52 1622 aa1.21□□□□□ -2.22
HDAC6-212ENST00000461608 FHAD1B1AJZ9 1412 aa1.21□□□□□ -2.22
HDAC6-212ENST00000461608 SYNJ1O43426 1573 aa1.21□□□□□ -2.22
HDAC6-212ENST00000461608 NUP155O75694 1391 aa1.21□□□□□ -2.22
HDAC6-212ENST00000461608 BAHCC1Q9P281 2608 aa1.2□□□□□ -2.22
HDAC6-212ENST00000461608 MDC1Q14676 2089 aaKnown RBP1.2□□□□□ -2.22
HDAC6-212ENST00000461608 CLASP1Q7Z460 1538 aa1.2□□□□□ -2.22
HDAC6-212ENST00000461608 WIZO95785 1651 aa1.2□□□□□ -2.22
HDAC6-212ENST00000461608 PBRM1Q86U86 1689 aa1.2□□□□□ -2.22
HDAC6-212ENST00000461608 FBN1P35555 2871 aaKnown RBP1.2□□□□□ -2.22
HDAC6-212ENST00000461608 TARBP1Q13395 1621 aaKnown RBP1.2□□□□□ -2.22
HDAC6-212ENST00000461608 MEIS3P1A6NDR6 274 aa1.2□□□□□ -2.22
HDAC6-212ENST00000461608 CLDN25C9JDP6 229 aa1.2□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms