RNA–Protein interactions for RNA: ENST00000461433.1

SSBP1-202, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 1 (best)

Gene SSBP1, Length 1,694 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-202ENST00000461433 TMEM50AO95807 157 aa8.7□□□□□ -1.02
SSBP1-202ENST00000461433 MBPP02686 304 aaPredicted RBP8.7□□□□□ -1.02
SSBP1-202ENST00000461433 HTR2BP41595 481 aa8.7□□□□□ -1.02
SSBP1-202ENST00000461433 PAX9P55771 341 aa8.7□□□□□ -1.02
SSBP1-202ENST00000461433 H2BFSP57053 126 aa8.7□□□□□ -1.02
SSBP1-202ENST00000461433 C2orf83Q53S99 150 aa8.7□□□□□ -1.02
SSBP1-202ENST00000461433 CCDC140Q96MF4 163 aa8.7□□□□□ -1.02
SSBP1-202ENST00000461433 HIPK2Q9H2X6 1198 aa8.7□□□□□ -1.02
SSBP1-202ENST00000461433 WRBO00258 174 aa8.69□□□□□ -1.02
SSBP1-202ENST00000461433 MED6O75586 246 aa8.69□□□□□ -1.02
SSBP1-202ENST00000461433 TRBV12-3P01733 135 aa8.69□□□□□ -1.02
SSBP1-202ENST00000461433 IAPPP10997 89 aa8.69□□□□□ -1.02
SSBP1-202ENST00000461433 FHL3Q13643 280 aa8.69□□□□□ -1.02
SSBP1-202ENST00000461433 EXOSC2Q13868 293 aaKnown RBP8.69□□□□□ -1.02
SSBP1-202ENST00000461433 SLC24A4Q8NFF2 622 aa8.69□□□□□ -1.02
SSBP1-202ENST00000461433 OR4F17Q8NGA8 305 aa8.69□□□□□ -1.02
SSBP1-202ENST00000461433 SCARB1Q8WTV0 552 aa8.69□□□□□ -1.02
SSBP1-202ENST00000461433 OR4F4Q96R69 305 aa8.69□□□□□ -1.02
SSBP1-202ENST00000461433 THYN1Q9P016 225 aa8.69□□□□□ -1.02
SSBP1-202ENST00000461433 RCL1Q9Y2P8 373 aaKnown RBP8.69□□□□□ -1.02
SSBP1-202ENST00000461433 U3KQ87 197 aa8.69□□□□□ -1.02
SSBP1-202ENST00000461433 IGHV4OR15-8A0A075B7B6 117 aa8.69□□□□□ -1.02
SSBP1-202ENST00000461433 A0A087WW49 117 aa8.69□□□□□ -1.02
SSBP1-202ENST00000461433 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.69□□□□□ -1.02
SSBP1-202ENST00000461433 IGHV3-21A0A0B4J1V1 117 aa8.69□□□□□ -1.02
SSBP1-202ENST00000461433 ANKRD34BA5PLL1 514 aa8.69□□□□□ -1.02
SSBP1-202ENST00000461433 C15orf62A8K5M9 175 aa8.69□□□□□ -1.02
SSBP1-202ENST00000461433 F8W735 103 aaPredicted RBP8.69□□□□□ -1.02
SSBP1-202ENST00000461433 CCL24O00175 119 aa8.69□□□□□ -1.02
SSBP1-202ENST00000461433 CYB5BO43169 146 aa8.69□□□□□ -1.02
SSBP1-202ENST00000461433 SCGB1D2O95969 90 aa8.69□□□□□ -1.02
SSBP1-202ENST00000461433 IGHV3-23P01764 117 aa8.69□□□□□ -1.02
SSBP1-202ENST00000461433 CXCL3P19876 107 aa8.69□□□□□ -1.02
SSBP1-202ENST00000461433 SUB1P53999 127 aaKnown RBP eCLIP8.69□□□□□ -1.021e-6■■□□□ 12.6
SSBP1-202ENST00000461433 MLANAQ16655 118 aa8.69□□□□□ -1.02
SSBP1-202ENST00000461433 OR11H1Q8NG94 326 aa8.69□□□□□ -1.02
SSBP1-202ENST00000461433 OR1N2Q8NGR9 330 aa8.69□□□□□ -1.02
SSBP1-202ENST00000461433 ZNF502Q8TBZ5 544 aa8.69□□□□□ -1.02
SSBP1-202ENST00000461433 VN1R17PQ8TDU5 208 aa8.69□□□□□ -1.02
SSBP1-202ENST00000461433 MISP3Q96FF7 219 aa8.69□□□□□ -1.02
SSBP1-202ENST00000461433 CXorf58Q96LI9 332 aa8.69□□□□□ -1.02
SSBP1-202ENST00000461433 C11orf1Q9H5F2 150 aa8.69□□□□□ -1.02
SSBP1-202ENST00000461433 FNDC4Q9H6D8 234 aaPredicted RBP8.69□□□□□ -1.02
SSBP1-202ENST00000461433 MGAT4CQ9UBM8 478 aa8.69□□□□□ -1.02
SSBP1-202ENST00000461433 K7EPK0 472 aa8.68□□□□□ -1.02
SSBP1-202ENST00000461433 SSSCA1O60232 199 aa8.68□□□□□ -1.02
SSBP1-202ENST00000461433 MT-CO2P00403 227 aa8.68□□□□□ -1.02
SSBP1-202ENST00000461433 IFNA10P01566 189 aa8.68□□□□□ -1.02
SSBP1-202ENST00000461433 HSPB1P04792 205 aaKnown RBP8.68□□□□□ -1.02
SSBP1-202ENST00000461433 NPY1RP25929 384 aa8.68□□□□□ -1.02
SSBP1-202ENST00000461433 MYCNOSP40205 109 aa8.68□□□□□ -1.02
SSBP1-202ENST00000461433 FCN2Q15485 313 aa8.68□□□□□ -1.02
SSBP1-202ENST00000461433 PRR31Q5SQ13 230 aa8.68□□□□□ -1.02
SSBP1-202ENST00000461433 OR11H7Q8NGC8 314 aa8.68□□□□□ -1.02
SSBP1-202ENST00000461433 EEF1AKMT3Q96AZ1 226 aa8.68□□□□□ -1.02
SSBP1-202ENST00000461433 SMIM8Q96KF7 97 aa8.68□□□□□ -1.02
SSBP1-202ENST00000461433 CIB3Q96Q77 187 aaPredicted RBP8.68□□□□□ -1.02
SSBP1-202ENST00000461433 OR4C12Q96R67 309 aa8.68□□□□□ -1.02
SSBP1-202ENST00000461433 NMES1Q9C002 83 aa8.68□□□□□ -1.02
SSBP1-202ENST00000461433 PEF1Q9UBV8 284 aaKnown RBP8.68□□□□□ -1.02
SSBP1-202ENST00000461433 WNK1Q9H4A3 2382 aa8.67□□□□□ -1.02
SSBP1-202ENST00000461433 TRBV7-1A0A0A6YYK4 115 aa8.67□□□□□ -1.02
SSBP1-202ENST00000461433 CORTO00230 105 aa8.67□□□□□ -1.02
SSBP1-202ENST00000461433 IGHV3-48P01763 117 aa8.67□□□□□ -1.02
SSBP1-202ENST00000461433 ATP5IP56385 69 aaPredicted RBP8.67□□□□□ -1.02
SSBP1-202ENST00000461433 ZNF616Q08AN1 781 aa8.67□□□□□ -1.02
SSBP1-202ENST00000461433 RAB32Q13637 225 aa8.67□□□□□ -1.02
SSBP1-202ENST00000461433 CLEC19AQ6UXS0 136 aa8.67□□□□□ -1.02
SSBP1-202ENST00000461433 PINX1Q96BK5 328 aaKnown RBP8.67□□□□□ -1.02
SSBP1-202ENST00000461433 MED28Q9H204 178 aa8.67□□□□□ -1.02
SSBP1-202ENST00000461433 MRPL36Q9P0J6 103 aaKnown RBP8.67□□□□□ -1.02
SSBP1-202ENST00000461433 PKD1L1Q8TDX9 2849 aa8.66□□□□□ -1.02
SSBP1-202ENST00000461433 PPP5D1E7EU14 171 aa8.66□□□□□ -1.02
SSBP1-202ENST00000461433 H3BP45 60 aa8.66□□□□□ -1.02
SSBP1-202ENST00000461433 BMPR1BO00238 502 aa8.66□□□□□ -1.02
SSBP1-202ENST00000461433 LY86O95711 162 aa8.66□□□□□ -1.02
SSBP1-202ENST00000461433 CLEC3BP05452 202 aa8.66□□□□□ -1.02
SSBP1-202ENST00000461433 RRAS2P62070 204 aaPredicted RBP8.66□□□□□ -1.02
SSBP1-202ENST00000461433 LINC00482Q8N8I6 264 aa8.66□□□□□ -1.02
SSBP1-202ENST00000461433 RNASEH2CQ8TDP1 164 aaKnown RBP8.66□□□□□ -1.02
SSBP1-202ENST00000461433 ZNF414Q96IQ9 312 aa8.66□□□□□ -1.02
SSBP1-202ENST00000461433 RAB40CQ96S21 281 aa8.66□□□□□ -1.02
SSBP1-202ENST00000461433 RANGRFQ9HD47 186 aaPredicted RBP8.66□□□□□ -1.02
SSBP1-202ENST00000461433 C21orf62Q9NYP8 219 aa8.66□□□□□ -1.02
SSBP1-202ENST00000461433 PSENENQ9NZ42 101 aa8.66□□□□□ -1.02
SSBP1-202ENST00000461433 LSM5Q9Y4Y9 91 aaKnown RBP8.66□□□□□ -1.02
SSBP1-202ENST00000461433 PMS2P5A8MQ11 134 aa8.65□□□□□ -1.02
SSBP1-202ENST00000461433 PRSS46E5RG02 174 aa8.65□□□□□ -1.02
SSBP1-202ENST00000461433 LINC01619G3V211 115 aa8.65□□□□□ -1.02
SSBP1-202ENST00000461433 FCGR2BP31994 310 aaPredicted RBP8.65□□□□□ -1.02
SSBP1-202ENST00000461433 SLURP1P55000 103 aa8.65□□□□□ -1.02
SSBP1-202ENST00000461433 TAS2R30P59541 319 aa8.65□□□□□ -1.02
SSBP1-202ENST00000461433 CYCSP99999 105 aaKnown RBP8.65□□□□□ -1.02
SSBP1-202ENST00000461433 SPANXN5Q5MJ07 72 aa8.65□□□□□ -1.02
SSBP1-202ENST00000461433 WFDC9Q8NEX5 89 aa8.65□□□□□ -1.02
SSBP1-202ENST00000461433 ATP6V0BQ99437 205 aa8.65□□□□□ -1.02
SSBP1-202ENST00000461433 CMYA5Q8N3K9 4069 aa8.65□□□□□ -1.03
SSBP1-202ENST00000461433 H0YIZ8 118 aa8.65□□□□□ -1.03
SSBP1-202ENST00000461433 PF4P02776 101 aa8.65□□□□□ -1.03
SSBP1-202ENST00000461433 HOXD3P31249 432 aaPredicted RBP8.65□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms