RNA–Protein interactions for RNA: ENST00000461127.5

TOP3A-202, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-202ENST00000461127 PRH1P02810 166 aa12.79□□□□□ -0.36
TOP3A-202ENST00000461127 TCTAP57738 103 aa12.79□□□□□ -0.36
TOP3A-202ENST00000461127 TAGLNQ01995 201 aaKnown RBP12.79□□□□□ -0.36
TOP3A-202ENST00000461127 TNXAQ16473 311 aa12.79□□□□□ -0.36
TOP3A-202ENST00000461127 RTL8BQ17RB0 113 aa12.79□□□□□ -0.36
TOP3A-202ENST00000461127 C12orf45Q8N5I9 185 aaPredicted RBP12.79□□□□□ -0.36
TOP3A-202ENST00000461127 UXS1Q8NBZ7 420 aa12.79□□□□□ -0.36
TOP3A-202ENST00000461127 OR1L6Q8NGR2 347 aa12.79□□□□□ -0.36
TOP3A-202ENST00000461127 CD300LFQ8TDQ1 290 aa12.79□□□□□ -0.36
TOP3A-202ENST00000461127 RNF183Q96D59 192 aa12.79□□□□□ -0.36
TOP3A-202ENST00000461127 TP53RKQ96S44 253 aa12.79□□□□□ -0.36
TOP3A-202ENST00000461127 MFFQ9GZY8 342 aa12.79□□□□□ -0.36
TOP3A-202ENST00000461127 TMEM222Q9H0R3 208 aa12.79□□□□□ -0.36
TOP3A-202ENST00000461127 TRBV9A0A0B4J1U6 114 aa12.78□□□□□ -0.36
TOP3A-202ENST00000461127 KIR2DL5BA0A0G2JN68 375 aa12.78□□□□□ -0.36
TOP3A-202ENST00000461127 KIR2DL5BA0A0G2JPC4 375 aa12.78□□□□□ -0.36
TOP3A-202ENST00000461127 ZNF320A2RRD8 509 aa12.78□□□□□ -0.36
TOP3A-202ENST00000461127 RRASP10301 218 aa12.78□□□□□ -0.36
TOP3A-202ENST00000461127 LPAR6P43657 344 aa12.78□□□□□ -0.36
TOP3A-202ENST00000461127 TMEM187Q14656 261 aa12.78□□□□□ -0.36
TOP3A-202ENST00000461127 C15orf32Q32M92 178 aa12.78□□□□□ -0.36
TOP3A-202ENST00000461127 FAM106AQ4KMX7 169 aa12.78□□□□□ -0.36
TOP3A-202ENST00000461127 RBPMS2Q6ZRY4 209 aaKnown RBP12.78□□□□□ -0.36
TOP3A-202ENST00000461127 GPHB5Q86YW7 130 aa12.78□□□□□ -0.36
TOP3A-202ENST00000461127 KIR2DL5AQ8N109 375 aa12.78□□□□□ -0.36
TOP3A-202ENST00000461127 LGI3Q8N145 548 aa12.78□□□□□ -0.36
TOP3A-202ENST00000461127 OR4S2Q8NH73 311 aa12.78□□□□□ -0.36
TOP3A-202ENST00000461127 KIR2DL5BQ8NHK3 375 aa12.78□□□□□ -0.36
TOP3A-202ENST00000461127 SRSF12Q8WXF0 261 aaKnown RBP12.78□□□□□ -0.36
TOP3A-202ENST00000461127 MLXQ9UH92 298 aa12.78□□□□□ -0.36
TOP3A-202ENST00000461127 TRAV25A0A0B4J276 109 aa12.77□□□□□ -0.37
TOP3A-202ENST00000461127 PIGBOS1A0A0B4J2F0 54 aa12.77□□□□□ -0.37
TOP3A-202ENST00000461127 UCP1P25874 307 aa12.77□□□□□ -0.37
TOP3A-202ENST00000461127 VMA21Q3ZAQ7 101 aa12.77□□□□□ -0.37
TOP3A-202ENST00000461127 OR4A47Q6IF82 309 aa12.77□□□□□ -0.37
TOP3A-202ENST00000461127 GLYATL2Q8WU03 294 aa12.77□□□□□ -0.37
TOP3A-202ENST00000461127 MITD1Q8WV92 249 aa12.77□□□□□ -0.37
TOP3A-202ENST00000461127 SPIN2AQ99865 258 aa12.77□□□□□ -0.37
TOP3A-202ENST00000461127 SPIN2BQ9BPZ2 258 aa12.77□□□□□ -0.37
TOP3A-202ENST00000461127 MED28Q9H204 178 aa12.77□□□□□ -0.37
TOP3A-202ENST00000461127 FAM212BQ9NTI7 297 aaPredicted RBP12.77□□□□□ -0.37
TOP3A-202ENST00000461127 PRR13Q9NZ81 148 aa12.77□□□□□ -0.37
TOP3A-202ENST00000461127 PKHD1P08F94 4074 aa12.77□□□□□ -0.37
TOP3A-202ENST00000461127 A0A0B4J2A0 478 aa12.76□□□□□ -0.37
TOP3A-202ENST00000461127 RBFOX2O43251 390 aaKnown RBP eCLIP12.76□□□□□ -0.37
TOP3A-202ENST00000461127 ACTL6BO94805 426 aa12.76□□□□□ -0.37
TOP3A-202ENST00000461127 ATG12O94817 140 aa12.76□□□□□ -0.37
TOP3A-202ENST00000461127 RPA2P15927 270 aa12.76□□□□□ -0.37
TOP3A-202ENST00000461127 TMEM268Q5VZI3 342 aa12.76□□□□□ -0.37
TOP3A-202ENST00000461127 C2CD4CQ8TF44 421 aa12.76□□□□□ -0.37
TOP3A-202ENST00000461127 FBXL17Q9UF56 701 aa12.76□□□□□ -0.37
TOP3A-202ENST00000461127 SHPKQ9UHJ6 478 aa12.76□□□□□ -0.37
TOP3A-202ENST00000461127 A0A1B0GVG6 124 aa12.75□□□□□ -0.37
TOP3A-202ENST00000461127 TMEM213A2RRL7 107 aa12.75□□□□□ -0.37
TOP3A-202ENST00000461127 A8MWP6 167 aa12.75□□□□□ -0.37
TOP3A-202ENST00000461127 OR2J3O76001 311 aa12.75□□□□□ -0.37
TOP3A-202ENST00000461127 CRYZL1O95825 349 aa12.75□□□□□ -0.37
TOP3A-202ENST00000461127 PRSS8Q16651 343 aa12.75□□□□□ -0.37
TOP3A-202ENST00000461127 TMEM177Q53S58 311 aa12.75□□□□□ -0.37
TOP3A-202ENST00000461127 BTNL8Q6UX41 500 aa12.75□□□□□ -0.37
TOP3A-202ENST00000461127 OR2C3Q8N628 320 aa12.75□□□□□ -0.37
TOP3A-202ENST00000461127 TEX45Q8NA69 505 aa12.75□□□□□ -0.37
TOP3A-202ENST00000461127 RNASE11Q8TAA1 199 aaKnown RBP12.75□□□□□ -0.37
TOP3A-202ENST00000461127 IL22RA2Q969J5 263 aa12.75□□□□□ -0.37
TOP3A-202ENST00000461127 TMEM56Q96MV1 263 aa12.75□□□□□ -0.37
TOP3A-202ENST00000461127 DNAH6Q9C0G6 4158 aa12.75□□□□□ -0.37
TOP3A-202ENST00000461127 TMEM56-RWDD3S4R434 201 aa12.75□□□□□ -0.37
TOP3A-202ENST00000461127 S1PR2O95136 353 aa12.74□□□□□ -0.37
TOP3A-202ENST00000461127 CDS2O95674 445 aa12.74□□□□□ -0.37
TOP3A-202ENST00000461127 HPRT1P00492 218 aa12.74□□□□□ -0.37
TOP3A-202ENST00000461127 ARL3P36405 182 aa12.74□□□□□ -0.37
TOP3A-202ENST00000461127 ERVK-16P61578 105 aa12.74□□□□□ -0.37
TOP3A-202ENST00000461127 ZNF585BQ52M93 769 aa12.74□□□□□ -0.37
TOP3A-202ENST00000461127 TTC9CQ8N5M4 171 aa12.74□□□□□ -0.37
TOP3A-202ENST00000461127 C11orf45Q8TAV5 145 aa12.74□□□□□ -0.37
TOP3A-202ENST00000461127 RBPMSQ93062 196 aaKnown RBP12.74□□□□□ -0.37
TOP3A-202ENST00000461127 MARC2Q969Z3 335 aa12.74□□□□□ -0.37
TOP3A-202ENST00000461127 PLEKHA2Q9HB19 425 aa12.74□□□□□ -0.37
TOP3A-202ENST00000461127 COMMD9Q9P000 198 aa12.74□□□□□ -0.37
TOP3A-202ENST00000461127 DMRT1Q9Y5R6 373 aa12.74□□□□□ -0.37
TOP3A-202ENST00000461127 SRRM4A7MD48 611 aaKnown RBP12.73□□□□□ -0.37
TOP3A-202ENST00000461127 IFNA21P01568 189 aa12.73□□□□□ -0.37
TOP3A-202ENST00000461127 HOXB5P09067 269 aa12.73□□□□□ -0.37
TOP3A-202ENST00000461127 AKR1C2P52895 323 aa12.73□□□□□ -0.37
TOP3A-202ENST00000461127 BRWD1-AS2P59051 145 aa12.73□□□□□ -0.37
TOP3A-202ENST00000461127 NANOS2P60321 138 aaKnown RBP12.73□□□□□ -0.37
TOP3A-202ENST00000461127 UBE2KP61086 200 aa12.73□□□□□ -0.37
TOP3A-202ENST00000461127 RRAS2P62070 204 aaPredicted RBP12.73□□□□□ -0.37
TOP3A-202ENST00000461127 MRGPRG-AS1Q2M3A8 158 aa12.73□□□□□ -0.37
TOP3A-202ENST00000461127 SELENOHQ8IZQ5 122 aaKnown RBP12.73□□□□□ -0.37
TOP3A-202ENST00000461127 LRTM2Q8N967 370 aa12.73□□□□□ -0.37
TOP3A-202ENST00000461127 LHFPL5Q8TAF8 219 aa12.73□□□□□ -0.37
TOP3A-202ENST00000461127 AIFM2Q9BRQ8 373 aa12.73□□□□□ -0.37
TOP3A-202ENST00000461127 FBXL7Q9UJT9 491 aa12.73□□□□□ -0.37
TOP3A-202ENST00000461127 A0A1B0GVY2 172 aa12.72□□□□□ -0.37
TOP3A-202ENST00000461127 DUXBA0A1W2PPF3 345 aa12.72□□□□□ -0.37
TOP3A-202ENST00000461127 FAM25EA8MYX2 175 aa12.72□□□□□ -0.37
TOP3A-202ENST00000461127 GOSR2O14653 212 aa12.72□□□□□ -0.37
TOP3A-202ENST00000461127 HRASP01112 189 aa12.72□□□□□ -0.37
TOP3A-202ENST00000461127 CTRB1P17538 263 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms