RNA–Protein interactions for RNA: ENST00000460601.5

NELFCD-201, Transcript of negative elongation factor complex member C/D, humanhuman

TSL 1 (best)

Gene NELFCD, Length 2,137 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFCD-201ENST00000460601 UQCC1Q9NVA1 299 aa13.31□□□□□ -0.28
NELFCD-201ENST00000460601 A6NDX4 124 aa13.3□□□□□ -0.28
NELFCD-201ENST00000460601 TEX46H3BTG2 121 aa13.3□□□□□ -0.28
NELFCD-201ENST00000460601 HLA-DRB1P01911 266 aa13.3□□□□□ -0.28
NELFCD-201ENST00000460601 SPP1P10451 314 aa13.3□□□□□ -0.28
NELFCD-201ENST00000460601 CTAG1AP78358 180 aa13.3□□□□□ -0.28
NELFCD-201ENST00000460601 LFNGQ8NES3 379 aa13.3□□□□□ -0.28
NELFCD-201ENST00000460601 WDR61Q9GZS3 305 aaKnown RBP13.3□□□□□ -0.28
NELFCD-201ENST00000460601 FNDC4Q9H6D8 234 aaPredicted RBP13.3□□□□□ -0.28
NELFCD-201ENST00000460601 MOB4Q9Y3A3 225 aa13.3□□□□□ -0.28
NELFCD-201ENST00000460601 BAHCC1Q9P281 2608 aa13.3□□□□□ -0.28
NELFCD-201ENST00000460601 IGHV3-21A0A0B4J1V1 117 aa13.3□□□□□ -0.28
NELFCD-201ENST00000460601 IFNA5P01569 189 aa13.3□□□□□ -0.28
NELFCD-201ENST00000460601 FHITP49789 147 aa13.3□□□□□ -0.28
NELFCD-201ENST00000460601 Q6ZS46 218 aa13.3□□□□□ -0.28
NELFCD-201ENST00000460601 LINC00052Q96N35 136 aa13.3□□□□□ -0.28
NELFCD-201ENST00000460601 TMEM147Q9BVK8 224 aa13.3□□□□□ -0.28
NELFCD-201ENST00000460601 ANK3Q12955 4377 aaKnown RBP13.29□□□□□ -0.28
NELFCD-201ENST00000460601 ATP6V0E1O15342 81 aa13.29□□□□□ -0.28
NELFCD-201ENST00000460601 NMBP08949 121 aa13.29□□□□□ -0.28
NELFCD-201ENST00000460601 IER3P46695 156 aa13.29□□□□□ -0.28
NELFCD-201ENST00000460601 BPIFB3P59826 476 aa13.29□□□□□ -0.28
NELFCD-201ENST00000460601 BTN1A1Q13410 526 aa13.29□□□□□ -0.28
NELFCD-201ENST00000460601 VWC2Q2TAL6 325 aa13.29□□□□□ -0.28
NELFCD-201ENST00000460601 DUX5Q96PT3 197 aa13.29□□□□□ -0.28
NELFCD-201ENST00000460601 PARP11Q9NR21 331 aa13.29□□□□□ -0.28
NELFCD-201ENST00000460601 YAE1D1Q9NRH1 226 aa13.29□□□□□ -0.28
NELFCD-201ENST00000460601 CD5LO43866 347 aa13.28□□□□□ -0.28
NELFCD-201ENST00000460601 BLCAPP62952 87 aa13.28□□□□□ -0.28
NELFCD-201ENST00000460601 EIF5AP63241 154 aaKnown RBP13.28□□□□□ -0.28
NELFCD-201ENST00000460601 TREML4Q6UXN2 200 aa13.28□□□□□ -0.28
NELFCD-201ENST00000460601 TMEM182Q6ZP80 229 aaPredicted RBP13.28□□□□□ -0.28
NELFCD-201ENST00000460601 C9orf139Q6ZV77 190 aa13.28□□□□□ -0.28
NELFCD-201ENST00000460601 MISP3Q96FF7 219 aa13.28□□□□□ -0.28
NELFCD-201ENST00000460601 LINC00527Q9UJ94 153 aa13.28□□□□□ -0.28
NELFCD-201ENST00000460601 FAM157CP0CG43 387 aa13.28□□□□□ -0.28
NELFCD-201ENST00000460601 FGF7P21781 194 aa13.28□□□□□ -0.28
NELFCD-201ENST00000460601 OPRK1P41145 380 aa13.28□□□□□ -0.28
NELFCD-201ENST00000460601 DEFA5Q01523 94 aa13.28□□□□□ -0.28
NELFCD-201ENST00000460601 OR2T6Q8NHC8 308 aa13.28□□□□□ -0.28
NELFCD-201ENST00000460601 TAF15Q92804 592 aaKnown RBP eCLIP13.28□□□□□ -0.28
NELFCD-201ENST00000460601 CXorf58Q96LI9 332 aa13.28□□□□□ -0.28
NELFCD-201ENST00000460601 WNT10AQ9GZT5 417 aa13.28□□□□□ -0.28
NELFCD-201ENST00000460601 MRPL36Q9P0J6 103 aaKnown RBP13.28□□□□□ -0.28
NELFCD-201ENST00000460601 PFDN2Q9UHV9 154 aa13.28□□□□□ -0.28
NELFCD-201ENST00000460601 F11RQ9Y624 299 aaKnown RBP13.28□□□□□ -0.28
NELFCD-201ENST00000460601 MTORP42345 2549 aa13.28□□□□□ -0.28
NELFCD-201ENST00000460601 ECSCRQ19T08 205 aa13.27□□□□□ -0.28
NELFCD-201ENST00000460601 C9orf152Q5JTZ5 239 aa13.27□□□□□ -0.28
NELFCD-201ENST00000460601 ZNF114Q8NC26 417 aa13.27□□□□□ -0.28
NELFCD-201ENST00000460601 OR2G3Q8NGZ4 309 aa13.27□□□□□ -0.28
NELFCD-201ENST00000460601 SCGB1C1Q8TD33 95 aa13.27□□□□□ -0.28
NELFCD-201ENST00000460601 SETXQ7Z333 2677 aaKnown RBP13.27□□□□□ -0.29
NELFCD-201ENST00000460601 IGKV1OR2-108A0A075B7D4 117 aa13.27□□□□□ -0.29
NELFCD-201ENST00000460601 G3V318 75 aa13.27□□□□□ -0.29
NELFCD-201ENST00000460601 HOXA3O43365 443 aaPredicted RBP13.27□□□□□ -0.29
NELFCD-201ENST00000460601 DEFA4P12838 97 aa13.27□□□□□ -0.29
NELFCD-201ENST00000460601 MDKP21741 143 aaPredicted RBP13.27□□□□□ -0.29
NELFCD-201ENST00000460601 GAMTQ14353 236 aa13.27□□□□□ -0.29
NELFCD-201ENST00000460601 ATP6V1FQ16864 119 aa13.27□□□□□ -0.29
NELFCD-201ENST00000460601 EIF4E3Q8N5X7 224 aaKnown RBP13.27□□□□□ -0.29
NELFCD-201ENST00000460601 OR5T1Q8NG75 326 aa13.27□□□□□ -0.29
NELFCD-201ENST00000460601 NPCDR1Q9BY65 106 aa13.27□□□□□ -0.29
NELFCD-201ENST00000460601 VSIRQ9H7M9 311 aa13.27□□□□□ -0.29
NELFCD-201ENST00000460601 FGF16O43320 207 aa13.26□□□□□ -0.29
NELFCD-201ENST00000460601 SEC11BP0C7V7 166 aa13.26□□□□□ -0.29
NELFCD-201ENST00000460601 DLK1P80370 383 aa13.26□□□□□ -0.29
NELFCD-201ENST00000460601 AKR1C1Q04828 323 aa13.26□□□□□ -0.29
NELFCD-201ENST00000460601 CD69Q07108 199 aa13.26□□□□□ -0.29
NELFCD-201ENST00000460601 BTNL8Q6UX41 500 aa13.26□□□□□ -0.29
NELFCD-201ENST00000460601 Q6YL49 198 aa13.26□□□□□ -0.29
NELFCD-201ENST00000460601 HSD17B13Q7Z5P4 300 aaPredicted RBP13.26□□□□□ -0.29
NELFCD-201ENST00000460601 OR1P1Q8NH06 330 aa13.26□□□□□ -0.29
NELFCD-201ENST00000460601 SUB1P53999 127 aaKnown RBP eCLIP13.25□□□□□ -0.29
NELFCD-201ENST00000460601 ACY3Q96HD9 319 aa13.25□□□□□ -0.29
NELFCD-201ENST00000460601 TMUB1Q9BVT8 246 aa13.25□□□□□ -0.29
NELFCD-201ENST00000460601 WDR83OSQ9Y284 106 aa13.25□□□□□ -0.29
NELFCD-201ENST00000460601 ELLP55199 621 aaPredicted RBP13.25□□□□□ -0.29
NELFCD-201ENST00000460601 SLC16A13Q7RTY0 426 aa13.25□□□□□ -0.29
NELFCD-201ENST00000460601 SGMS2Q8NHU3 365 aa13.25□□□□□ -0.29
NELFCD-201ENST00000460601 MGST2Q99735 147 aa13.25□□□□□ -0.29
NELFCD-201ENST00000460601 PITPNC1Q9UKF7 332 aa13.25□□□□□ -0.29
NELFCD-201ENST00000460601 S4R3C0 116 aa13.25□□□□□ -0.29
NELFCD-201ENST00000460601 ZNF705EA8MWA4 302 aaPredicted RBP13.24□□□□□ -0.29
NELFCD-201ENST00000460601 EIF3GO75821 320 aaKnown RBP eCLIP13.24□□□□□ -0.29
NELFCD-201ENST00000460601 SRP14P37108 136 aaKnown RBP13.24□□□□□ -0.29
NELFCD-201ENST00000460601 EIF5AL1Q6IS14 154 aaKnown RBP13.24□□□□□ -0.29
NELFCD-201ENST00000460601 Q71RC1 249 aaPredicted RBP13.24□□□□□ -0.29
NELFCD-201ENST00000460601 MRPL41Q8IXM3 137 aaKnown RBP13.24□□□□□ -0.29
NELFCD-201ENST00000460601 SIGLECL1Q8N7X8 197 aa13.24□□□□□ -0.29
NELFCD-201ENST00000460601 RNF141Q8WVD5 230 aa13.24□□□□□ -0.29
NELFCD-201ENST00000460601 GGACTQ9BVM4 153 aa13.24□□□□□ -0.29
NELFCD-201ENST00000460601 LSM4Q9Y4Z0 139 aaKnown RBP13.24□□□□□ -0.29
NELFCD-201ENST00000460601 HIVEP1P15822 2718 aa13.24□□□□□ -0.29
NELFCD-201ENST00000460601 SULT1A2P50226 295 aa13.24□□□□□ -0.29
NELFCD-201ENST00000460601 PVRIGQ6DKI7 326 aa13.24□□□□□ -0.29
NELFCD-201ENST00000460601 RNASEH2CQ8TDP1 164 aaKnown RBP13.24□□□□□ -0.29
NELFCD-201ENST00000460601 GNPNAT1Q96EK6 184 aaPredicted RBP13.24□□□□□ -0.29
NELFCD-201ENST00000460601 NOL4LQ96MY1 436 aaPredicted RBP13.24□□□□□ -0.29
NELFCD-201ENST00000460601 NPVFQ9HCQ7 196 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms