RNA–Protein interactions for RNA: ENST00000460170.2

PTPRU-205, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,337 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-205ENST00000460170 ZNF841Q6ZN19 808 aa12.27□□□□□ -0.45
PTPRU-205ENST00000460170 DOCK7Q96N67 2140 aa12.26□□□□□ -0.45
PTPRU-205ENST00000460170 FANCMQ8IYD8 2048 aa12.26□□□□□ -0.45
PTPRU-205ENST00000460170 IGKV1D-33P01593 117 aa12.26□□□□□ -0.45
PTPRU-205ENST00000460170 IGKV1-33P01594 117 aa12.26□□□□□ -0.45
PTPRU-205ENST00000460170 BTF3P20290 206 aaKnown RBP12.26□□□□□ -0.45
PTPRU-205ENST00000460170 TMEM170AQ8WVE7 144 aa12.26□□□□□ -0.45
PTPRU-205ENST00000460170 MAP1LC3AQ9H492 121 aa12.26□□□□□ -0.45
PTPRU-205ENST00000460170 PKDREJQ9NTG1 2253 aa12.26□□□□□ -0.45
PTPRU-205ENST00000460170 HEATR1Q9H583 2144 aaKnown RBP12.26□□□□□ -0.45
PTPRU-205ENST00000460170 NPPCP23582 126 aa12.26□□□□□ -0.45
PTPRU-205ENST00000460170 TCTAP57738 103 aa12.26□□□□□ -0.45
PTPRU-205ENST00000460170 CD69Q07108 199 aa12.26□□□□□ -0.45
PTPRU-205ENST00000460170 EFNB3Q15768 340 aa12.26□□□□□ -0.45
PTPRU-205ENST00000460170 FOXA2Q9Y261 457 aaPredicted RBP12.26□□□□□ -0.45
PTPRU-205ENST00000460170 FOXH1O75593 365 aa12.26□□□□□ -0.45
PTPRU-205ENST00000460170 SOD3P08294 240 aa12.26□□□□□ -0.45
PTPRU-205ENST00000460170 CX3CL1P78423 397 aa12.26□□□□□ -0.45
PTPRU-205ENST00000460170 TMEM14EPQ6UXP3 125 aa12.26□□□□□ -0.45
PTPRU-205ENST00000460170 TCF24Q7RTU0 167 aa12.26□□□□□ -0.45
PTPRU-205ENST00000460170 NEU4Q8WWR8 484 aaPredicted RBP12.26□□□□□ -0.45
PTPRU-205ENST00000460170 RPUSD1Q9UJJ7 312 aaKnown RBP12.26□□□□□ -0.45
PTPRU-205ENST00000460170 RFNGQ9Y644 331 aa12.26□□□□□ -0.45
PTPRU-205ENST00000460170 ATP5G2Q06055 141 aa12.26□□□□□ -0.45
PTPRU-205ENST00000460170 SRSF9Q13242 221 aaKnown RBP eCLIP12.26□□□□□ -0.45
PTPRU-205ENST00000460170 C12orf54Q6X4T0 127 aa12.26□□□□□ -0.45
PTPRU-205ENST00000460170 RPP25LQ8N5L8 163 aaKnown RBP12.26□□□□□ -0.45
PTPRU-205ENST00000460170 UBE2CO00762 179 aa12.25□□□□□ -0.45
PTPRU-205ENST00000460170 HLA-DRB1P01911 266 aa12.25□□□□□ -0.45
PTPRU-205ENST00000460170 SELLP14151 372 aa12.25□□□□□ -0.45
PTPRU-205ENST00000460170 TIMP3P35625 211 aa12.25□□□□□ -0.45
PTPRU-205ENST00000460170 SLC25A34Q6PIV7 304 aa12.25□□□□□ -0.45
PTPRU-205ENST00000460170 TREML4Q6UXN2 200 aa12.25□□□□□ -0.45
PTPRU-205ENST00000460170 TMEM133Q9H2Q1 129 aa12.25□□□□□ -0.45
PTPRU-205ENST00000460170 TMEM242Q9NWH2 141 aa12.25□□□□□ -0.45
PTPRU-205ENST00000460170 AUP1Q9Y679 476 aa12.25□□□□□ -0.45
PTPRU-205ENST00000460170 TICRRQ7Z2Z1 1910 aa12.25□□□□□ -0.45
PTPRU-205ENST00000460170 DPRXA6NFQ7 191 aa12.25□□□□□ -0.45
PTPRU-205ENST00000460170 TCF21O43680 179 aa12.25□□□□□ -0.45
PTPRU-205ENST00000460170 ATOH7Q8N100 152 aa12.25□□□□□ -0.45
PTPRU-205ENST00000460170 EEF1AKMT3Q96AZ1 226 aa12.25□□□□□ -0.45
PTPRU-205ENST00000460170 TEX45Q8NA69 505 aa12.25□□□□□ -0.45
PTPRU-205ENST00000460170 PIMREGQ9BSJ6 248 aa12.25□□□□□ -0.45
PTPRU-205ENST00000460170 S4R3C0 116 aa12.25□□□□□ -0.45
PTPRU-205ENST00000460170 MYO7BQ6PIF6 2116 aa12.25□□□□□ -0.45
PTPRU-205ENST00000460170 TFPI2P48307 235 aa12.25□□□□□ -0.45
PTPRU-205ENST00000460170 C21orf62Q9NYP8 219 aa12.25□□□□□ -0.45
PTPRU-205ENST00000460170 A0A1W2PRE2 83 aa12.24□□□□□ -0.45
PTPRU-205ENST00000460170 C2orf83Q53S99 150 aa12.24□□□□□ -0.45
PTPRU-205ENST00000460170 COLCA1Q6ZS62 124 aa12.24□□□□□ -0.45
PTPRU-205ENST00000460170 CD177Q8N6Q3 437 aa12.24□□□□□ -0.45
PTPRU-205ENST00000460170 LRRK1Q38SD2 2015 aa12.24□□□□□ -0.45
PTPRU-205ENST00000460170 TRBV24-1A0A075B6N3 115 aa12.24□□□□□ -0.45
PTPRU-205ENST00000460170 GPR82Q96P67 336 aa12.24□□□□□ -0.45
PTPRU-205ENST00000460170 METRNQ9UJH8 293 aa12.24□□□□□ -0.45
PTPRU-205ENST00000460170 ANAPC10Q9UM13 185 aa12.24□□□□□ -0.45
PTPRU-205ENST00000460170 TBL2Q9Y4P3 447 aaKnown RBP12.24□□□□□ -0.45
PTPRU-205ENST00000460170 SLC25A15Q9Y619 301 aa12.24□□□□□ -0.45
PTPRU-205ENST00000460170 PGPEP1LA6NFU8 196 aa12.24□□□□□ -0.45
PTPRU-205ENST00000460170 OR4C46A6NHA9 309 aa12.24□□□□□ -0.45
PTPRU-205ENST00000460170 HERPUD1Q15011 391 aa12.24□□□□□ -0.45
PTPRU-205ENST00000460170 ATG101Q9BSB4 218 aa12.24□□□□□ -0.45
PTPRU-205ENST00000460170 WNT10AQ9GZT5 417 aa12.24□□□□□ -0.45
PTPRU-205ENST00000460170 AP5S1Q9NUS5 200 aa12.24□□□□□ -0.45
PTPRU-205ENST00000460170 SPTAN1Q13813 2472 aaKnown RBP12.24□□□□□ -0.45
PTPRU-205ENST00000460170 LY6G6EA0A0G2JKS1 128 aa12.24□□□□□ -0.45
PTPRU-205ENST00000460170 EBLN2Q6P2I7 272 aa12.24□□□□□ -0.45
PTPRU-205ENST00000460170 OCC1Q8TAD7 63 aa12.24□□□□□ -0.45
PTPRU-205ENST00000460170 DYNLRB2Q8TF09 96 aa12.24□□□□□ -0.45
PTPRU-205ENST00000460170 GGTLC1Q9BX51 225 aa12.24□□□□□ -0.45
PTPRU-205ENST00000460170 RNASE7Q9H1E1 156 aaKnown RBP12.24□□□□□ -0.45
PTPRU-205ENST00000460170 U3KQA8 63 aa12.24□□□□□ -0.45
PTPRU-205ENST00000460170 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.24□□□□□ -0.45
PTPRU-205ENST00000460170 PDLIM4P50479 330 aa12.24□□□□□ -0.45
PTPRU-205ENST00000460170 FMC1Q96HJ9 113 aa12.24□□□□□ -0.45
PTPRU-205ENST00000460170 RNF224P0DH78 156 aa12.23□□□□□ -0.45
PTPRU-205ENST00000460170 ATP5J2P56134 94 aa12.23□□□□□ -0.45
PTPRU-205ENST00000460170 RPP21Q9H633 154 aaKnown RBP12.23□□□□□ -0.45
PTPRU-205ENST00000460170 C20orf204Q6ZNR8 217 aa12.23□□□□□ -0.45
PTPRU-205ENST00000460170 PROK2Q9HC23 129 aa12.23□□□□□ -0.45
PTPRU-205ENST00000460170 FBXL7Q9UJT9 491 aa12.23□□□□□ -0.45
PTPRU-205ENST00000460170 IZUMO1RA6ND01 250 aa12.23□□□□□ -0.45
PTPRU-205ENST00000460170 LY6EQ16553 131 aa12.23□□□□□ -0.45
PTPRU-205ENST00000460170 PPP1R27Q86WC6 154 aa12.23□□□□□ -0.45
PTPRU-205ENST00000460170 RNASE6Q93091 150 aaKnown RBP12.23□□□□□ -0.45
PTPRU-205ENST00000460170 IGHV3OR16-13A0A075B7E8 117 aa12.23□□□□□ -0.45
PTPRU-205ENST00000460170 IGHV3-74A0A0B4J1X5 117 aa12.23□□□□□ -0.45
PTPRU-205ENST00000460170 FOXI3A8MTJ6 420 aaPredicted RBP12.23□□□□□ -0.45
PTPRU-205ENST00000460170 SIAH2O43255 324 aa12.23□□□□□ -0.45
PTPRU-205ENST00000460170 CXCL1P09341 107 aa12.23□□□□□ -0.45
PTPRU-205ENST00000460170 STAG3L2P0CL84 134 aa12.23□□□□□ -0.45
PTPRU-205ENST00000460170 STAG3L3P0CL85 134 aa12.23□□□□□ -0.45
PTPRU-205ENST00000460170 DLX6P56179 175 aa12.23□□□□□ -0.45
PTPRU-205ENST00000460170 TCF23Q7RTU1 214 aa12.23□□□□□ -0.45
PTPRU-205ENST00000460170 Q9H3A6 140 aa12.23□□□□□ -0.45
PTPRU-205ENST00000460170 PHLDA3Q9Y5J5 127 aa12.23□□□□□ -0.45
PTPRU-205ENST00000460170 A0A0G2JRQ6 117 aa12.22□□□□□ -0.45
PTPRU-205ENST00000460170 A0A1B0GUT8 65 aa12.22□□□□□ -0.45
PTPRU-205ENST00000460170 TCRBV4S1A1TA0A5B7 111 aa12.22□□□□□ -0.45
PTPRU-205ENST00000460170 C5orf52A6NGY3 159 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 84.9 ms