RNA–Protein interactions for RNA: ENST00000459004.1

SCARNA18-201, small Cajal body-specific RNA 18, humanhuman

BASIC

Gene SCARNA18, Length 134 nt, Biotype snoRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA18-201ENST00000459004 LRRC25Q8N386 305 aaPredicted RBP0.23□□□□□ -2.37
SCARNA18-201ENST00000459004 TMEM156Q8N614 296 aa0.23□□□□□ -2.37
SCARNA18-201ENST00000459004 OR13C4Q8NGS5 318 aa0.23□□□□□ -2.37
SCARNA18-201ENST00000459004 ULBP3Q9BZM4 244 aa0.23□□□□□ -2.37
SCARNA18-201ENST00000459004 MIXL1Q9H2W2 232 aa0.23□□□□□ -2.37
SCARNA18-201ENST00000459004 E9PCH4 1651 aa0.23□□□□□ -2.37
SCARNA18-201ENST00000459004 MED12LQ86YW9 2145 aa0.22□□□□□ -2.37
SCARNA18-201ENST00000459004 TRBV6-8A0A0A6YYG3 113 aa0.22□□□□□ -2.37
SCARNA18-201ENST00000459004 A0A0A6YYH2 397 aa0.22□□□□□ -2.37
SCARNA18-201ENST00000459004 TRAV1-1A0A0B4J248 108 aa0.22□□□□□ -2.37
SCARNA18-201ENST00000459004 A6NJ64 397 aa0.22□□□□□ -2.37
SCARNA18-201ENST00000459004 M0QX08 132 aa0.22□□□□□ -2.37
SCARNA18-201ENST00000459004 KCNK1O00180 336 aa0.22□□□□□ -2.37
SCARNA18-201ENST00000459004 RPS12P25398 132 aaKnown RBP0.22□□□□□ -2.37
SCARNA18-201ENST00000459004 SSR2P43308 183 aa0.22□□□□□ -2.37
SCARNA18-201ENST00000459004 RAB5BP61020 215 aa0.22□□□□□ -2.37
SCARNA18-201ENST00000459004 RHEBQ15382 184 aa0.22□□□□□ -2.37
SCARNA18-201ENST00000459004 KHDC3LQ587J8 217 aa0.22□□□□□ -2.37
SCARNA18-201ENST00000459004 DPPA3Q6W0C5 159 aa0.22□□□□□ -2.37
SCARNA18-201ENST00000459004 MIR17HGQ75NE6 70 aa0.22□□□□□ -2.37
SCARNA18-201ENST00000459004 SFT2D1Q8WV19 159 aa0.22□□□□□ -2.37
SCARNA18-201ENST00000459004 RAB8BQ92930 207 aa0.22□□□□□ -2.37
SCARNA18-201ENST00000459004 TMEM147Q9BVK8 224 aa0.22□□□□□ -2.37
SCARNA18-201ENST00000459004 OR51I1Q9H343 314 aa0.22□□□□□ -2.37
SCARNA18-201ENST00000459004 RASL12Q9NYN1 266 aa0.22□□□□□ -2.37
SCARNA18-201ENST00000459004 MCM3APO60318 1980 aa0.21□□□□□ -2.38
SCARNA18-201ENST00000459004 EML6Q6ZMW3 1958 aa0.21□□□□□ -2.38
SCARNA18-201ENST00000459004 EVC2Q86UK5 1308 aa0.21□□□□□ -2.38
SCARNA18-201ENST00000459004 A0A1W2PPM0 123 aa0.21□□□□□ -2.38
SCARNA18-201ENST00000459004 H0Y980 276 aa0.21□□□□□ -2.38
SCARNA18-201ENST00000459004 SLC16A4O15374 487 aa0.21□□□□□ -2.38
SCARNA18-201ENST00000459004 UBL3O95164 117 aa0.21□□□□□ -2.38
SCARNA18-201ENST00000459004 HBA1P69905 142 aa0.21□□□□□ -2.38
SCARNA18-201ENST00000459004 TMED1Q13445 227 aa0.21□□□□□ -2.38
SCARNA18-201ENST00000459004 SFXN4Q6P4A7 337 aa0.21□□□□□ -2.38
SCARNA18-201ENST00000459004 BPIFA4PQ86YQ2 179 aa0.21□□□□□ -2.38
SCARNA18-201ENST00000459004 CLVS1Q8IUQ0 354 aaPredicted RBP0.21□□□□□ -2.38
SCARNA18-201ENST00000459004 TERB2Q8NHR7 220 aa0.21□□□□□ -2.38
SCARNA18-201ENST00000459004 IMP4Q96G21 291 aaKnown RBP0.21□□□□□ -2.38
SCARNA18-201ENST00000459004 TMEM70Q9BUB7 260 aa0.21□□□□□ -2.38
SCARNA18-201ENST00000459004 DRC3Q9H069 523 aa0.21□□□□□ -2.38
SCARNA18-201ENST00000459004 ACER3Q9NUN7 267 aa0.21□□□□□ -2.38
SCARNA18-201ENST00000459004 TAS2R4Q9NYW5 299 aa0.21□□□□□ -2.38
SCARNA18-201ENST00000459004 TP73-AS1Q9UF72 201 aa0.21□□□□□ -2.38
SCARNA18-201ENST00000459004 CEP192Q8TEP8 1941 aa0.21□□□□□ -2.38
SCARNA18-201ENST00000459004 EML5Q05BV3 1969 aa0.2□□□□□ -2.38
SCARNA18-201ENST00000459004 LRRN3E7EW58 273 aa0.2□□□□□ -2.38
SCARNA18-201ENST00000459004 NCR3O14931 201 aa0.2□□□□□ -2.38
SCARNA18-201ENST00000459004 OR2B3O76000 313 aa0.2□□□□□ -2.38
SCARNA18-201ENST00000459004 TCL1BO95988 128 aa0.2□□□□□ -2.38
SCARNA18-201ENST00000459004 OR5G3P0C626 314 aa0.2□□□□□ -2.38
SCARNA18-201ENST00000459004 CNBPP62633 177 aaKnown RBP0.2□□□□□ -2.38
SCARNA18-201ENST00000459004 SRSF6Q13247 344 aaKnown RBP0.2□□□□□ -2.38
SCARNA18-201ENST00000459004 PMAIP1Q13794 54 aa0.2□□□□□ -2.38
SCARNA18-201ENST00000459004 FAM151BQ6UXP7 276 aa0.2□□□□□ -2.38
SCARNA18-201ENST00000459004 SOSTDC1Q6X4U4 206 aa0.2□□□□□ -2.38
SCARNA18-201ENST00000459004 SIGLECL1Q8N7X8 197 aa0.2□□□□□ -2.38
SCARNA18-201ENST00000459004 OR5A1Q8NGJ0 315 aa0.2□□□□□ -2.38
SCARNA18-201ENST00000459004 DNAJC9Q8WXX5 260 aa0.2□□□□□ -2.38
SCARNA18-201ENST00000459004 KLK6Q92876 244 aa0.2□□□□□ -2.38
SCARNA18-201ENST00000459004 BORCS5Q969J3 196 aa0.2□□□□□ -2.38
SCARNA18-201ENST00000459004 OPTNQ96CV9 577 aa0.2□□□□□ -2.38
SCARNA18-201ENST00000459004 C10orf95Q9H7T3 257 aa0.2□□□□□ -2.38
SCARNA18-201ENST00000459004 XPNPEP1Q9NQW7 623 aa0.2□□□□□ -2.38
SCARNA18-201ENST00000459004 C9orf84Q5VXU9 1444 aa0.2□□□□□ -2.38
SCARNA18-201ENST00000459004 MACF1Q9UPN3 7388 aaKnown RBP0.2□□□□□ -2.38
SCARNA18-201ENST00000459004 MTUS2Q5JR59 1369 aa0.19□□□□□ -2.38
SCARNA18-201ENST00000459004 COL1A1P02452 1464 aaPredicted RBP0.19□□□□□ -2.38
SCARNA18-201ENST00000459004 TRAV12-1A0A0B4J245 112 aa0.19□□□□□ -2.38
SCARNA18-201ENST00000459004 SULT1B1O43704 296 aa0.19□□□□□ -2.38
SCARNA18-201ENST00000459004 IFNA10P01566 189 aa0.19□□□□□ -2.38
SCARNA18-201ENST00000459004 MAGEA2P43356 314 aa0.19□□□□□ -2.38
SCARNA18-201ENST00000459004 AP2S1P53680 142 aaPredicted RBP0.19□□□□□ -2.38
SCARNA18-201ENST00000459004 MPV17LQ2QL34 196 aa0.19□□□□□ -2.38
SCARNA18-201ENST00000459004 RNASE10Q5GAN6 216 aaKnown RBP0.19□□□□□ -2.38
SCARNA18-201ENST00000459004 C1orf137Q5JT78 98 aa0.19□□□□□ -2.38
SCARNA18-201ENST00000459004 LPCAT4Q643R3 524 aa0.19□□□□□ -2.38
SCARNA18-201ENST00000459004 PDPK2PQ6A1A2 396 aa0.19□□□□□ -2.38
SCARNA18-201ENST00000459004 LPCAT3Q6P1A2 487 aa0.19□□□□□ -2.38
SCARNA18-201ENST00000459004 CD200R1LQ6Q8B3 271 aa0.19□□□□□ -2.38
SCARNA18-201ENST00000459004 ALKAL1Q6UXT8 129 aa0.19□□□□□ -2.38
SCARNA18-201ENST00000459004 OR51D1Q8NGF3 324 aa0.19□□□□□ -2.38
SCARNA18-201ENST00000459004 PRTFDC1Q9NRG1 225 aa0.19□□□□□ -2.38
SCARNA18-201ENST00000459004 CDC42SE1Q9NRR8 79 aa0.19□□□□□ -2.38
SCARNA18-201ENST00000459004 SLC39A9Q9NUM3 307 aa0.19□□□□□ -2.38
SCARNA18-201ENST00000459004 FBXL12Q9NXK8 326 aa0.19□□□□□ -2.38
SCARNA18-201ENST00000459004 USE1Q9NZ43 259 aa0.19□□□□□ -2.38
SCARNA18-201ENST00000459004 HS3ST2Q9Y278 367 aa0.19□□□□□ -2.38
SCARNA18-201ENST00000459004 LSM5Q9Y4Y9 91 aaKnown RBP0.19□□□□□ -2.38
SCARNA18-201ENST00000459004 MUC5ACP98088 5654 aa0.18□□□□□ -2.38
SCARNA18-201ENST00000459004 ZFC3H1O60293 1989 aaKnown RBP0.18□□□□□ -2.38
SCARNA18-201ENST00000459004 TNRC6AQ8NDV7 1962 aaKnown RBP0.18□□□□□ -2.38
SCARNA18-201ENST00000459004 PQLC2LA1A4F0 135 aa0.18□□□□□ -2.38
SCARNA18-201ENST00000459004 EEF1E1-BLOC1S5C9J1V9 151 aa0.18□□□□□ -2.38
SCARNA18-201ENST00000459004 LYZL6O75951 148 aa0.18□□□□□ -2.38
SCARNA18-201ENST00000459004 PROSCO94903 275 aa0.18□□□□□ -2.38
SCARNA18-201ENST00000459004 DEXIO95424 95 aa0.18□□□□□ -2.38
SCARNA18-201ENST00000459004 ISG15P05161 165 aa0.18□□□□□ -2.38
SCARNA18-201ENST00000459004 MGST1P10620 155 aaKnown RBP0.18□□□□□ -2.38
SCARNA18-201ENST00000459004 ZNF25P17030 456 aaPredicted RBP0.18□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms