RNA–Protein interactions for RNA: ENST00000458516.5

TRIM39-211, Transcript of tripartite motif containing 39, humanhuman

TSL 2

Gene TRIM39, Length 1,003 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-211ENST00000458516 TSSC4Q9Y5U2 329 aaPredicted RBP13.07□□□□□ -0.32
TRIM39-211ENST00000458516 H3BP45 60 aa13.06□□□□□ -0.32
TRIM39-211ENST00000458516 CYB5BO43169 146 aa13.06□□□□□ -0.32
TRIM39-211ENST00000458516 DEDDO75618 318 aa13.06□□□□□ -0.32
TRIM39-211ENST00000458516 GIPP09681 153 aaPredicted RBP13.06□□□□□ -0.32
TRIM39-211ENST00000458516 CDX1P47902 265 aaPredicted RBP13.06□□□□□ -0.32
TRIM39-211ENST00000458516 TAS2R30P59541 319 aa13.06□□□□□ -0.32
TRIM39-211ENST00000458516 C15orf32Q32M92 178 aa13.06□□□□□ -0.32
TRIM39-211ENST00000458516 MISP3Q96FF7 219 aa13.06□□□□□ -0.32
TRIM39-211ENST00000458516 USMG5Q96IX5 58 aa13.06□□□□□ -0.32
TRIM39-211ENST00000458516 UBE2E2Q96LR5 201 aa13.06□□□□□ -0.32
TRIM39-211ENST00000458516 GNB4Q9HAV0 340 aa13.06□□□□□ -0.32
TRIM39-211ENST00000458516 PSENENQ9NZ42 101 aa13.06□□□□□ -0.32
TRIM39-211ENST00000458516 TENM1Q9UKZ4 2725 aa13.06□□□□□ -0.32
TRIM39-211ENST00000458516 hCG_2014768A0A024R1R8 64 aa13.05□□□□□ -0.32
TRIM39-211ENST00000458516 A0A0G2JLM5 398 aa13.05□□□□□ -0.32
TRIM39-211ENST00000458516 A0A1B0GVG6 124 aa13.05□□□□□ -0.32
TRIM39-211ENST00000458516 A0A1W2PRX2 142 aa13.05□□□□□ -0.32
TRIM39-211ENST00000458516 MFSD2BA6NFX1 497 aa13.05□□□□□ -0.32
TRIM39-211ENST00000458516 H0YIZ8 118 aa13.05□□□□□ -0.32
TRIM39-211ENST00000458516 I3L2K1 104 aa13.05□□□□□ -0.32
TRIM39-211ENST00000458516 K7EIM0 57 aa13.05□□□□□ -0.32
TRIM39-211ENST00000458516 IGHV3-11P01762 117 aa13.05□□□□□ -0.32
TRIM39-211ENST00000458516 SPANXN5Q5MJ07 72 aa13.05□□□□□ -0.32
TRIM39-211ENST00000458516 NDUFA11Q86Y39 141 aa13.05□□□□□ -0.32
TRIM39-211ENST00000458516 ASB13Q8WXK3 278 aa13.05□□□□□ -0.32
TRIM39-211ENST00000458516 THYN1Q9P016 225 aa13.05□□□□□ -0.32
TRIM39-211ENST00000458516 IGHV3-21A0A0B4J1V1 117 aa13.04□□□□□ -0.32
TRIM39-211ENST00000458516 L7N2F9 121 aa13.04□□□□□ -0.32
TRIM39-211ENST00000458516 CORTO00230 105 aa13.04□□□□□ -0.32
TRIM39-211ENST00000458516 TSC22D2O75157 780 aa13.04□□□□□ -0.32
TRIM39-211ENST00000458516 MPC2O95563 127 aa13.04□□□□□ -0.32
TRIM39-211ENST00000458516 ATP5IP56385 69 aaPredicted RBP13.04□□□□□ -0.32
TRIM39-211ENST00000458516 VAMP2P63027 116 aa13.04□□□□□ -0.32
TRIM39-211ENST00000458516 ATP5G2Q06055 141 aa13.04□□□□□ -0.32
TRIM39-211ENST00000458516 EXOSC2Q13868 293 aaKnown RBP13.04□□□□□ -0.32
TRIM39-211ENST00000458516 SHISA2Q6UWI4 295 aa13.04□□□□□ -0.32
TRIM39-211ENST00000458516 NOXA1Q86UR1 476 aa13.04□□□□□ -0.32
TRIM39-211ENST00000458516 KLHL30-AS1Q8NEE0 82 aa13.04□□□□□ -0.32
TRIM39-211ENST00000458516 C4orf3Q8WVX3 66 aa13.04□□□□□ -0.32
TRIM39-211ENST00000458516 PINX1Q96BK5 328 aaKnown RBP13.04□□□□□ -0.32
TRIM39-211ENST00000458516 OR5B12Q96R08 314 aa13.04□□□□□ -0.32
TRIM39-211ENST00000458516 FNDC4Q9H6D8 234 aaPredicted RBP13.04□□□□□ -0.32
TRIM39-211ENST00000458516 OR5AC2Q9NZP5 309 aa13.04□□□□□ -0.32
TRIM39-211ENST00000458516 STRAPQ9Y3F4 350 aaKnown RBP13.04□□□□□ -0.32
TRIM39-211ENST00000458516 S4R3C0 116 aa13.04□□□□□ -0.32
TRIM39-211ENST00000458516 STAB1Q9NY15 2570 aa13.03□□□□□ -0.32
TRIM39-211ENST00000458516 TRAV14DV4A0A0A6YYC5 116 aa13.03□□□□□ -0.32
TRIM39-211ENST00000458516 I3L521 148 aa13.03□□□□□ -0.32
TRIM39-211ENST00000458516 MT-CO2P00403 227 aa13.03□□□□□ -0.32
TRIM39-211ENST00000458516 LGALS1P09382 135 aaKnown RBP13.03□□□□□ -0.32
TRIM39-211ENST00000458516 OR8U8P0C7N1 319 aa13.03□□□□□ -0.32
TRIM39-211ENST00000458516 PVALBP20472 110 aaPredicted RBP13.03□□□□□ -0.32
TRIM39-211ENST00000458516 RAP2BP61225 183 aa13.03□□□□□ -0.32
TRIM39-211ENST00000458516 RPP30P78346 268 aaKnown RBP13.03□□□□□ -0.32
TRIM39-211ENST00000458516 NSUN5P1Q3KNT7 163 aa13.03□□□□□ -0.32
TRIM39-211ENST00000458516 ZNF343Q6P1L6 599 aa13.03□□□□□ -0.32
TRIM39-211ENST00000458516 TMEM14EPQ6UXP3 125 aa13.03□□□□□ -0.32
TRIM39-211ENST00000458516 RNASEH2CQ8TDP1 164 aaKnown RBP13.03□□□□□ -0.32
TRIM39-211ENST00000458516 VN1R17PQ8TDU5 208 aa13.03□□□□□ -0.32
TRIM39-211ENST00000458516 CCDC140Q96MF4 163 aa13.03□□□□□ -0.32
TRIM39-211ENST00000458516 RNF126Q9BV68 326 aa13.03□□□□□ -0.32
TRIM39-211ENST00000458516 PAIP2BQ9ULR5 123 aaKnown RBP13.03□□□□□ -0.32
TRIM39-211ENST00000458516 NUDT19A8MXV4 375 aa13.02□□□□□ -0.33
TRIM39-211ENST00000458516 PRSS46E5RG02 174 aa13.02□□□□□ -0.33
TRIM39-211ENST00000458516 CCNKO75909 580 aa13.02□□□□□ -0.33
TRIM39-211ENST00000458516 IGHV3-23P01764 117 aa13.02□□□□□ -0.33
TRIM39-211ENST00000458516 RLN2P04090 185 aa13.02□□□□□ -0.33
TRIM39-211ENST00000458516 RAB11AP62491 216 aa13.02□□□□□ -0.33
TRIM39-211ENST00000458516 RUNX1Q01196 453 aa13.02□□□□□ -0.33
TRIM39-211ENST00000458516 ETV3LQ6ZN32 361 aa13.02□□□□□ -0.33
TRIM39-211ENST00000458516 C8orf86Q6ZUL3 223 aa13.02□□□□□ -0.33
TRIM39-211ENST00000458516 ZNF502Q8TBZ5 544 aa13.02□□□□□ -0.33
TRIM39-211ENST00000458516 SCARB1Q8WTV0 552 aa13.02□□□□□ -0.33
TRIM39-211ENST00000458516 EEF1AKMT3Q96AZ1 226 aa13.02□□□□□ -0.33
TRIM39-211ENST00000458516 CXorf58Q96LI9 332 aa13.02□□□□□ -0.33
TRIM39-211ENST00000458516 LYRM2Q9NU23 88 aaPredicted RBP13.02□□□□□ -0.33
TRIM39-211ENST00000458516 MBD2Q9UBB5 411 aa13.02□□□□□ -0.33
TRIM39-211ENST00000458516 FAM24AA6NFZ4 105 aa13.01□□□□□ -0.33
TRIM39-211ENST00000458516 PMS2P5A8MQ11 134 aa13.01□□□□□ -0.33
TRIM39-211ENST00000458516 E5RGE8 158 aa13.01□□□□□ -0.33
TRIM39-211ENST00000458516 IFNA4P05014 189 aa13.01□□□□□ -0.33
TRIM39-211ENST00000458516 PET100P0DJ07 73 aa13.01□□□□□ -0.33
TRIM39-211ENST00000458516 OPRK1P41145 380 aa13.01□□□□□ -0.33
TRIM39-211ENST00000458516 BCAP31P51572 246 aa13.01□□□□□ -0.33
TRIM39-211ENST00000458516 MLANAQ16655 118 aa13.01□□□□□ -0.33
TRIM39-211ENST00000458516 Q5BKY6 102 aa13.01□□□□□ -0.33
TRIM39-211ENST00000458516 PRSS54Q6PEW0 395 aa13.01□□□□□ -0.33
TRIM39-211ENST00000458516 ANK2Q01484 3957 aa13.01□□□□□ -0.33
TRIM39-211ENST00000458516 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13□□□□□ -0.33
TRIM39-211ENST00000458516 TRBV7-1A0A0A6YYK4 115 aa13□□□□□ -0.33
TRIM39-211ENST00000458516 RPS10-NUDT3A0A1W2PQS6 291 aa13□□□□□ -0.33
TRIM39-211ENST00000458516 IGSF23A1L1A6 192 aa13□□□□□ -0.33
TRIM39-211ENST00000458516 F8W735 103 aaPredicted RBP13□□□□□ -0.33
TRIM39-211ENST00000458516 G3V3Q6 166 aa13□□□□□ -0.33
TRIM39-211ENST00000458516 TRBV12-3P01733 135 aa13□□□□□ -0.33
TRIM39-211ENST00000458516 IGHV3-48P01763 117 aa13□□□□□ -0.33
TRIM39-211ENST00000458516 METTL15P1P0C7V9 234 aa13□□□□□ -0.33
TRIM39-211ENST00000458516 LYL1P12980 280 aa13□□□□□ -0.33
TRIM39-211ENST00000458516 CAV2P51636 162 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms