RNA–Protein interactions for RNA: ENST00000458085.6

CAPN13-203, Transcript of calpain 13, humanhuman

TSL 5

Gene CAPN13, Length 2,269 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN13-203ENST00000458085 RPL29P47914 159 aaKnown RBP13.08□□□□□ -0.32
CAPN13-203ENST00000458085 LGALS4P56470 323 aa13.08□□□□□ -0.32
CAPN13-203ENST00000458085 SRSF1Q07955 248 aaKnown RBP eCLIP13.08□□□□□ -0.32
CAPN13-203ENST00000458085 SLC16A13Q7RTY0 426 aa13.08□□□□□ -0.32
CAPN13-203ENST00000458085 ABHD5Q8WTS1 349 aa13.08□□□□□ -0.32
CAPN13-203ENST00000458085 A0A1W2PPV4 95 aa13.07□□□□□ -0.32
CAPN13-203ENST00000458085 H3BQ15 152 aa13.07□□□□□ -0.32
CAPN13-203ENST00000458085 ACTL6BO94805 426 aa13.07□□□□□ -0.32
CAPN13-203ENST00000458085 OR10J1P30954 320 aa13.07□□□□□ -0.32
CAPN13-203ENST00000458085 PMS2P11Q13670 270 aa13.07□□□□□ -0.32
CAPN13-203ENST00000458085 HABP2Q14520 560 aaPredicted RBP13.07□□□□□ -0.32
CAPN13-203ENST00000458085 ACY3Q96HD9 319 aa13.07□□□□□ -0.32
CAPN13-203ENST00000458085 TBX15Q96SF7 602 aa13.07□□□□□ -0.32
CAPN13-203ENST00000458085 SEPSECSQ9HD40 501 aaKnown RBP13.07□□□□□ -0.32
CAPN13-203ENST00000458085 ZFHX3Q15911 3703 aa13.07□□□□□ -0.32
CAPN13-203ENST00000458085 TEX22C9J3V5 150 aa13.06□□□□□ -0.32
CAPN13-203ENST00000458085 CEACAM3P40198 252 aa13.06□□□□□ -0.32
CAPN13-203ENST00000458085 PDLIM4P50479 330 aa13.06□□□□□ -0.32
CAPN13-203ENST00000458085 MMDQ15546 238 aa13.06□□□□□ -0.32
CAPN13-203ENST00000458085 NRGNQ92686 78 aa13.06□□□□□ -0.32
CAPN13-203ENST00000458085 CSMD2Q7Z408 3487 aa13.06□□□□□ -0.32
CAPN13-203ENST00000458085 LRRK2Q5S007 2527 aa13.06□□□□□ -0.32
CAPN13-203ENST00000458085 IFNA1P01562 189 aa13.06□□□□□ -0.32
CAPN13-203ENST00000458085 RAB31Q13636 194 aa13.06□□□□□ -0.32
CAPN13-203ENST00000458085 SLC35E3Q7Z769 313 aa13.06□□□□□ -0.32
CAPN13-203ENST00000458085 SOX15O60248 233 aa13.05□□□□□ -0.32
CAPN13-203ENST00000458085 PAGE4O60829 102 aa13.05□□□□□ -0.32
CAPN13-203ENST00000458085 TOX4O94842 621 aa13.05□□□□□ -0.32
CAPN13-203ENST00000458085 ARL14EPLP0DKL9 152 aa13.05□□□□□ -0.32
CAPN13-203ENST00000458085 PLGLAQ15195 96 aa13.05□□□□□ -0.32
CAPN13-203ENST00000458085 RBMS3Q6XE24 437 aaKnown RBP13.05□□□□□ -0.32
CAPN13-203ENST00000458085 EAF1Q96JC9 268 aaPredicted RBP13.05□□□□□ -0.32
CAPN13-203ENST00000458085 RNF5Q99942 180 aa13.05□□□□□ -0.32
CAPN13-203ENST00000458085 KLF2Q9Y5W3 355 aaPredicted RBP13.05□□□□□ -0.32
CAPN13-203ENST00000458085 UBR5O95071 2799 aaPredicted RBP13.05□□□□□ -0.32
CAPN13-203ENST00000458085 GPX4P36969 197 aaPredicted RBP13.05□□□□□ -0.32
CAPN13-203ENST00000458085 MEF2BQ02080 365 aaPredicted RBP13.05□□□□□ -0.32
CAPN13-203ENST00000458085 RNASEH2CQ8TDP1 164 aaKnown RBP13.05□□□□□ -0.32
CAPN13-203ENST00000458085 SRSF12Q8WXF0 261 aaKnown RBP13.05□□□□□ -0.32
CAPN13-203ENST00000458085 CACNG8Q8WXS5 425 aa13.05□□□□□ -0.32
CAPN13-203ENST00000458085 SPOCK3Q9BQ16 436 aa13.05□□□□□ -0.32
CAPN13-203ENST00000458085 MAP1AP78559 2803 aaPredicted RBP13.05□□□□□ -0.32
CAPN13-203ENST00000458085 CELSR2Q9HCU4 2923 aa13.05□□□□□ -0.32
CAPN13-203ENST00000458085 GOSR1O95249 250 aa13.04□□□□□ -0.32
CAPN13-203ENST00000458085 STAG3L2P0CL84 134 aa13.04□□□□□ -0.32
CAPN13-203ENST00000458085 STAG3L3P0CL85 134 aa13.04□□□□□ -0.32
CAPN13-203ENST00000458085 MAS1LP35410 378 aa13.04□□□□□ -0.32
CAPN13-203ENST00000458085 SLC35E1Q96K37 410 aa13.04□□□□□ -0.32
CAPN13-203ENST00000458085 KCNIP2Q9NS61 270 aa13.04□□□□□ -0.32
CAPN13-203ENST00000458085 DMRT1Q9Y5R6 373 aa13.04□□□□□ -0.32
CAPN13-203ENST00000458085 IGHV4-61A0A0C4DH41 118 aa13.04□□□□□ -0.32
CAPN13-203ENST00000458085 NBR2O15453 112 aa13.04□□□□□ -0.32
CAPN13-203ENST00000458085 FOXH1O75593 365 aa13.04□□□□□ -0.32
CAPN13-203ENST00000458085 MOSP00540 346 aa13.04□□□□□ -0.32
CAPN13-203ENST00000458085 ATF4P18848 351 aaPredicted RBP13.04□□□□□ -0.32
CAPN13-203ENST00000458085 PSMB3P49720 205 aa13.04□□□□□ -0.32
CAPN13-203ENST00000458085 SUB1P53999 127 aaKnown RBP eCLIP13.04□□□□□ -0.32
CAPN13-203ENST00000458085 UBE2G2P60604 165 aa13.04□□□□□ -0.32
CAPN13-203ENST00000458085 HES1Q14469 280 aa13.04□□□□□ -0.32
CAPN13-203ENST00000458085 NPIPB3Q92617 1050 aa13.04□□□□□ -0.32
CAPN13-203ENST00000458085 MISP3Q96FF7 219 aa13.04□□□□□ -0.32
CAPN13-203ENST00000458085 AJUBAQ96IF1 538 aa13.04□□□□□ -0.32
CAPN13-203ENST00000458085 CELSR1Q9NYQ6 3014 aa13.03□□□□□ -0.32
CAPN13-203ENST00000458085 IGHV3-21A0A0B4J1V1 117 aa13.03□□□□□ -0.32
CAPN13-203ENST00000458085 SPNS3Q6ZMD2 512 aa13.03□□□□□ -0.32
CAPN13-203ENST00000458085 FAM168AQ92567 244 aa13.03□□□□□ -0.32
CAPN13-203ENST00000458085 ISOC2Q96AB3 205 aa13.03□□□□□ -0.32
CAPN13-203ENST00000458085 MANBALQ9NQG1 85 aa13.03□□□□□ -0.32
CAPN13-203ENST00000458085 IGKV1D-37A0A075B6S9 117 aa13.02□□□□□ -0.32
CAPN13-203ENST00000458085 PVRIGQ6DKI7 326 aa13.02□□□□□ -0.32
CAPN13-203ENST00000458085 MIR17HGQ75NE6 70 aa13.02□□□□□ -0.32
CAPN13-203ENST00000458085 ZNF114Q8NC26 417 aa13.02□□□□□ -0.32
CAPN13-203ENST00000458085 OR4F5Q8NH21 305 aa13.02□□□□□ -0.32
CAPN13-203ENST00000458085 OR4F4Q96R69 305 aa13.02□□□□□ -0.32
CAPN13-203ENST00000458085 NIPSNAP3BQ9BS92 247 aa13.02□□□□□ -0.32
CAPN13-203ENST00000458085 NDUFA3O95167 84 aa13.02□□□□□ -0.33
CAPN13-203ENST00000458085 ATP5J2P56134 94 aa13.02□□□□□ -0.33
CAPN13-203ENST00000458085 KIAA0141Q14154 515 aaPredicted RBP13.02□□□□□ -0.33
CAPN13-203ENST00000458085 TMEM249Q2WGJ8 235 aa13.02□□□□□ -0.33
CAPN13-203ENST00000458085 MINOS1Q5TGZ0 78 aa13.02□□□□□ -0.33
CAPN13-203ENST00000458085 FAM78BQ5VT40 261 aa13.02□□□□□ -0.33
CAPN13-203ENST00000458085 NPBQ8NG41 125 aa13.02□□□□□ -0.33
CAPN13-203ENST00000458085 C10orf105Q8TEF2 133 aa13.02□□□□□ -0.33
CAPN13-203ENST00000458085 SLC25A33Q9BSK2 321 aa13.02□□□□□ -0.33
CAPN13-203ENST00000458085 SMCO4Q9NRQ5 59 aa13.02□□□□□ -0.33
CAPN13-203ENST00000458085 MINOS1-NBL1R4GNA1 71 aa13.02□□□□□ -0.33
CAPN13-203ENST00000458085 FBN2P35556 2912 aa13.02□□□□□ -0.33
CAPN13-203ENST00000458085 A1L4Q6 167 aa13.01□□□□□ -0.33
CAPN13-203ENST00000458085 ATP5G3P48201 142 aa13.01□□□□□ -0.33
CAPN13-203ENST00000458085 RND2P52198 227 aa13.01□□□□□ -0.33
CAPN13-203ENST00000458085 ZNF90Q03938 601 aa13.01□□□□□ -0.33
CAPN13-203ENST00000458085 RHEBQ15382 184 aa13.01□□□□□ -0.33
CAPN13-203ENST00000458085 PIMREGQ9BSJ6 248 aa13.01□□□□□ -0.33
CAPN13-203ENST00000458085 FAM103A1Q9BTL3 118 aaKnown RBP13.01□□□□□ -0.33
CAPN13-203ENST00000458085 IGHV4-30-2A0A087WSY4 118 aa13.01□□□□□ -0.33
CAPN13-203ENST00000458085 LOC105371267A0A1B0GV96 52 aa13.01□□□□□ -0.33
CAPN13-203ENST00000458085 COLCA2A8K830 154 aa13.01□□□□□ -0.33
CAPN13-203ENST00000458085 NPPCP23582 126 aa13.01□□□□□ -0.33
CAPN13-203ENST00000458085 RHOBP62745 196 aa13.01□□□□□ -0.33
CAPN13-203ENST00000458085 CYP2G1PQ6ZSU1 146 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms