RNA–Protein interactions for RNA: ENST00000457942.1

CHCHD3-204, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 4

Gene CHCHD3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-204ENST00000457942 MT-CO2P00403 227 aa11.72□□□□□ -0.53
CHCHD3-204ENST00000457942 IGKV1-39P01597 117 aa11.72□□□□□ -0.53
CHCHD3-204ENST00000457942 IGHV3-48P01763 117 aa11.72□□□□□ -0.53
CHCHD3-204ENST00000457942 IGKV1D-39P04432 117 aa11.72□□□□□ -0.53
CHCHD3-204ENST00000457942 CTSDP07339 412 aaPredicted RBP11.72□□□□□ -0.53
CHCHD3-204ENST00000457942 PI3P19957 117 aa11.72□□□□□ -0.53
CHCHD3-204ENST00000457942 PPP5CP53041 499 aa11.72□□□□□ -0.53
CHCHD3-204ENST00000457942 PRCDQ00LT1 54 aa11.72□□□□□ -0.53
CHCHD3-204ENST00000457942 PMS2P11Q13670 270 aa11.72□□□□□ -0.53
CHCHD3-204ENST00000457942 SLC35G3Q8N808 338 aa11.72□□□□□ -0.53
CHCHD3-204ENST00000457942 OVOL2Q9BRP0 275 aa11.72□□□□□ -0.53
CHCHD3-204ENST00000457942 PDCD10Q9BUL8 212 aa11.72□□□□□ -0.53
CHCHD3-204ENST00000457942 HECTD4Q9Y4D8 3996 aa11.72□□□□□ -0.53
CHCHD3-204ENST00000457942 DNAH10Q8IVF4 4471 aa11.71□□□□□ -0.53
CHCHD3-204ENST00000457942 IGKV3-7A0A075B6H7 116 aa11.71□□□□□ -0.53
CHCHD3-204ENST00000457942 IGHV3-49A0A0A0MS15 119 aa11.71□□□□□ -0.53
CHCHD3-204ENST00000457942 K7EMT4 169 aa11.71□□□□□ -0.53
CHCHD3-204ENST00000457942 CTSGP08311 255 aa11.71□□□□□ -0.53
CHCHD3-204ENST00000457942 RPL35AP18077 110 aaKnown RBP11.71□□□□□ -0.53
CHCHD3-204ENST00000457942 PIGPP57054 158 aa11.71□□□□□ -0.53
CHCHD3-204ENST00000457942 HSPE1P61604 102 aaKnown RBP11.71□□□□□ -0.53
CHCHD3-204ENST00000457942 TRIM16LQ309B1 348 aa11.71□□□□□ -0.53
CHCHD3-204ENST00000457942 DEFB135Q30KP9 77 aa11.71□□□□□ -0.53
CHCHD3-204ENST00000457942 FAAP20Q6NZ36 180 aa11.71□□□□□ -0.53
CHCHD3-204ENST00000457942 RNASE11Q8TAA1 199 aaKnown RBP11.71□□□□□ -0.53
CHCHD3-204ENST00000457942 ZNF486Q96H40 463 aaPredicted RBP11.71□□□□□ -0.53
CHCHD3-204ENST00000457942 COPZ2Q9P299 210 aa11.71□□□□□ -0.53
CHCHD3-204ENST00000457942 IGHV7-4-1A0A0J9YVY3 117 aa11.7□□□□□ -0.54
CHCHD3-204ENST00000457942 CXorf65A6NEN9 183 aa11.7□□□□□ -0.54
CHCHD3-204ENST00000457942 I3L2K1 104 aa11.7□□□□□ -0.54
CHCHD3-204ENST00000457942 ATG12O94817 140 aa11.7□□□□□ -0.54
CHCHD3-204ENST00000457942 IFNA17P01571 189 aa11.7□□□□□ -0.54
CHCHD3-204ENST00000457942 CD3DP04234 171 aa11.7□□□□□ -0.54
CHCHD3-204ENST00000457942 SNCAP37840 140 aa11.7□□□□□ -0.54
CHCHD3-204ENST00000457942 TFPI2P48307 235 aa11.7□□□□□ -0.54
CHCHD3-204ENST00000457942 HOXA1P49639 335 aaPredicted RBP11.7□□□□□ -0.54
CHCHD3-204ENST00000457942 IZUMO4Q1ZYL8 232 aa11.7□□□□□ -0.54
CHCHD3-204ENST00000457942 ODF3L2Q3SX64 289 aa11.7□□□□□ -0.54
CHCHD3-204ENST00000457942 SCGB2B2Q4G0G5 96 aa11.7□□□□□ -0.54
CHCHD3-204ENST00000457942 ARRDC1Q8N5I2 433 aa11.7□□□□□ -0.54
CHCHD3-204ENST00000457942 STPG3Q8N7X2 389 aa11.7□□□□□ -0.54
CHCHD3-204ENST00000457942 CCDC71LQ8N9Z2 235 aa11.7□□□□□ -0.54
CHCHD3-204ENST00000457942 ZNF114Q8NC26 417 aa11.7□□□□□ -0.54
CHCHD3-204ENST00000457942 TMEM116Q8NCL8 245 aa11.7□□□□□ -0.54
CHCHD3-204ENST00000457942 OR4D10Q8NGI6 311 aa11.7□□□□□ -0.54
CHCHD3-204ENST00000457942 TXN2Q99757 166 aa11.7□□□□□ -0.54
CHCHD3-204ENST00000457942 RHPN1-AS1Q9BWJ2 59 aa11.7□□□□□ -0.54
CHCHD3-204ENST00000457942 MTFP1Q9UDX5 166 aa11.7□□□□□ -0.54
CHCHD3-204ENST00000457942 SMPXQ9UHP9 88 aa11.7□□□□□ -0.54
CHCHD3-204ENST00000457942 IGHV3OR16-13A0A075B7E8 117 aa11.69□□□□□ -0.54
CHCHD3-204ENST00000457942 IGHV3-74A0A0B4J1X5 117 aa11.69□□□□□ -0.54
CHCHD3-204ENST00000457942 SPRY2O43597 315 aa11.69□□□□□ -0.54
CHCHD3-204ENST00000457942 TBPP20226 339 aa11.69□□□□□ -0.54
CHCHD3-204ENST00000457942 TNFSF8P32971 234 aa11.69□□□□□ -0.54
CHCHD3-204ENST00000457942 RND3P61587 244 aa11.69□□□□□ -0.54
CHCHD3-204ENST00000457942 RPP25LQ8N5L8 163 aaKnown RBP11.69□□□□□ -0.54
CHCHD3-204ENST00000457942 C15orf40Q8WUR7 153 aa11.69□□□□□ -0.54
CHCHD3-204ENST00000457942 RNF2Q99496 336 aa11.69□□□□□ -0.54
CHCHD3-204ENST00000457942 GINS3Q9BRX5 216 aa11.69□□□□□ -0.54
CHCHD3-204ENST00000457942 NXF2Q9GZY0 626 aaKnown RBP11.69□□□□□ -0.54
CHCHD3-204ENST00000457942 ENY2Q9NPA8 101 aa11.69□□□□□ -0.54
CHCHD3-204ENST00000457942 TRAV14DV4A0A0A6YYC5 116 aa11.68□□□□□ -0.54
CHCHD3-204ENST00000457942 A0A0J9YWU9 116 aa11.68□□□□□ -0.54
CHCHD3-204ENST00000457942 C3orf85A0A1B0GTC6 90 aa11.68□□□□□ -0.54
CHCHD3-204ENST00000457942 GABARAPH6UMI1 98 aa11.68□□□□□ -0.54
CHCHD3-204ENST00000457942 UBE2CO00762 179 aa11.68□□□□□ -0.54
CHCHD3-204ENST00000457942 CHEK1O14757 476 aa11.68□□□□□ -0.54
CHCHD3-204ENST00000457942 FCGR2BP31994 310 aaPredicted RBP11.68□□□□□ -0.54
CHCHD3-204ENST00000457942 BMI1P35226 326 aa11.68□□□□□ -0.54
CHCHD3-204ENST00000457942 NPBWR1P48145 328 aa11.68□□□□□ -0.54
CHCHD3-204ENST00000457942 Q6ZWC4 215 aa11.68□□□□□ -0.54
CHCHD3-204ENST00000457942 DUSP18Q8NEJ0 188 aa11.68□□□□□ -0.54
CHCHD3-204ENST00000457942 ZFAND1Q8TCF1 268 aa11.68□□□□□ -0.54
CHCHD3-204ENST00000457942 RRNAD1Q96FB5 475 aaKnown RBP11.68□□□□□ -0.54
CHCHD3-204ENST00000457942 TP53RKQ96S44 253 aa11.68□□□□□ -0.54
CHCHD3-204ENST00000457942 RYR1P21817 5038 aa11.68□□□□□ -0.54
CHCHD3-204ENST00000457942 RAB3DO95716 219 aa11.67□□□□□ -0.54
CHCHD3-204ENST00000457942 IGKV1-5P01602 117 aa11.67□□□□□ -0.54
CHCHD3-204ENST00000457942 SUB1P53999 127 aaKnown RBP eCLIP11.67□□□□□ -0.54
CHCHD3-204ENST00000457942 TAS2R19P59542 299 aa11.67□□□□□ -0.54
CHCHD3-204ENST00000457942 LYG2Q86SG7 212 aa11.67□□□□□ -0.54
CHCHD3-204ENST00000457942 LHFPL1Q86WI0 220 aa11.67□□□□□ -0.54
CHCHD3-204ENST00000457942 APRG1Q8IVJ8 170 aa11.67□□□□□ -0.54
CHCHD3-204ENST00000457942 GBGT1Q8N5D6 347 aa11.67□□□□□ -0.54
CHCHD3-204ENST00000457942 SMIM4Q8WVI0 70 aa11.67□□□□□ -0.54
CHCHD3-204ENST00000457942 GALNT14Q96FL9 552 aa11.67□□□□□ -0.54
CHCHD3-204ENST00000457942 TP53TG1Q9Y2A0 90 aa11.67□□□□□ -0.54
CHCHD3-204ENST00000457942 KIR2DL5BA0A0G2JN68 375 aa11.66□□□□□ -0.54
CHCHD3-204ENST00000457942 KIR2DL5BA0A0G2JPC4 375 aa11.66□□□□□ -0.54
CHCHD3-204ENST00000457942 FABP12A6NFH5 140 aa11.66□□□□□ -0.54
CHCHD3-204ENST00000457942 ST8SIA3O43173 380 aa11.66□□□□□ -0.54
CHCHD3-204ENST00000457942 PAFAH1B2P68402 229 aa11.66□□□□□ -0.54
CHCHD3-204ENST00000457942 SP6Q3SY56 376 aa11.66□□□□□ -0.54
CHCHD3-204ENST00000457942 STEAP1BQ6NZ63 245 aa11.66□□□□□ -0.54
CHCHD3-204ENST00000457942 KIR2DL5AQ8N109 375 aa11.66□□□□□ -0.54
CHCHD3-204ENST00000457942 TMEM229BQ8NBD8 167 aa11.66□□□□□ -0.54
CHCHD3-204ENST00000457942 OR13C8Q8NGS7 320 aa11.66□□□□□ -0.54
CHCHD3-204ENST00000457942 KIR2DL5BQ8NHK3 375 aa11.66□□□□□ -0.54
CHCHD3-204ENST00000457942 OR10C1Q96KK4 312 aa11.66□□□□□ -0.54
CHCHD3-204ENST00000457942 C14orf166Q9Y224 244 aaKnown RBP11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms