RNA–Protein interactions for RNA: ENST00000457035.5

ATG4A-206, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 939 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-206ENST00000457035 MFSD2BA6NFX1 497 aa7.72□□□□□ -1.17
ATG4A-206ENST00000457035 MPTX1A8MV57 137 aa7.72□□□□□ -1.17
ATG4A-206ENST00000457035 K7EIM0 57 aa7.72□□□□□ -1.17
ATG4A-206ENST00000457035 ADAP1O75689 374 aa7.72□□□□□ -1.17
ATG4A-206ENST00000457035 IL5P05113 134 aa7.72□□□□□ -1.17
ATG4A-206ENST00000457035 OR8U8P0C7N1 319 aa7.72□□□□□ -1.17
ATG4A-206ENST00000457035 RNASE2P10153 161 aaKnown RBP7.72□□□□□ -1.17
ATG4A-206ENST00000457035 SLURP1P55000 103 aa7.72□□□□□ -1.17
ATG4A-206ENST00000457035 DEFA1P59665 94 aa7.72□□□□□ -1.17
ATG4A-206ENST00000457035 DEFA3P59666 94 aa7.72□□□□□ -1.17
ATG4A-206ENST00000457035 TNFRSF9Q07011 255 aa7.72□□□□□ -1.17
ATG4A-206ENST00000457035 EXOSC2Q13868 293 aaKnown RBP7.72□□□□□ -1.17
ATG4A-206ENST00000457035 BSXQ3C1V8 233 aa7.72□□□□□ -1.17
ATG4A-206ENST00000457035 ENKURQ8TC29 256 aa7.72□□□□□ -1.17
ATG4A-206ENST00000457035 VN1R17PQ8TDU5 208 aa7.72□□□□□ -1.17
ATG4A-206ENST00000457035 ZNF431Q8TF32 576 aaPredicted RBP7.72□□□□□ -1.17
ATG4A-206ENST00000457035 DCUN1D4Q92564 292 aa7.72□□□□□ -1.17
ATG4A-206ENST00000457035 DLX4Q92988 240 aaPredicted RBP7.72□□□□□ -1.17
ATG4A-206ENST00000457035 CCDC140Q96MF4 163 aa7.72□□□□□ -1.17
ATG4A-206ENST00000457035 SEC22CQ9BRL7 303 aa7.72□□□□□ -1.17
ATG4A-206ENST00000457035 MARVELD1Q9BSK0 173 aa7.72□□□□□ -1.17
ATG4A-206ENST00000457035 CACFD1Q9UGQ2 172 aa7.72□□□□□ -1.17
ATG4A-206ENST00000457035 S4R3C0 116 aa7.72□□□□□ -1.17
ATG4A-206ENST00000457035 TRBV7-1A0A0A6YYK4 115 aa7.71□□□□□ -1.18
ATG4A-206ENST00000457035 I3L2K1 104 aa7.71□□□□□ -1.18
ATG4A-206ENST00000457035 BMPR1BO00238 502 aa7.71□□□□□ -1.18
ATG4A-206ENST00000457035 CYB5BO43169 146 aa7.71□□□□□ -1.18
ATG4A-206ENST00000457035 NXPH3O95157 252 aa7.71□□□□□ -1.18
ATG4A-206ENST00000457035 IGHV3-23P01764 117 aa7.71□□□□□ -1.18
ATG4A-206ENST00000457035 CLEC3BP05452 202 aa7.71□□□□□ -1.18
ATG4A-206ENST00000457035 IGLL1P15814 213 aa7.71□□□□□ -1.18
ATG4A-206ENST00000457035 ZP3P21754 424 aa7.71□□□□□ -1.18
ATG4A-206ENST00000457035 HOXD3P31249 432 aaPredicted RBP7.71□□□□□ -1.18
ATG4A-206ENST00000457035 SNCAP37840 140 aa7.71□□□□□ -1.18
ATG4A-206ENST00000457035 KLF5Q13887 457 aaPredicted RBP7.71□□□□□ -1.18
ATG4A-206ENST00000457035 FAM209BQ5JX69 171 aa7.71□□□□□ -1.18
ATG4A-206ENST00000457035 C1QL4Q86Z23 238 aa7.71□□□□□ -1.18
ATG4A-206ENST00000457035 OR1S1Q8NH92 325 aa7.71□□□□□ -1.18
ATG4A-206ENST00000457035 ZNF502Q8TBZ5 544 aa7.71□□□□□ -1.18
ATG4A-206ENST00000457035 SCARB1Q8WTV0 552 aa7.71□□□□□ -1.18
ATG4A-206ENST00000457035 EEF1AKMT3Q96AZ1 226 aa7.71□□□□□ -1.18
ATG4A-206ENST00000457035 RCC1LQ96I51 464 aaKnown RBP7.71□□□□□ -1.18
ATG4A-206ENST00000457035 CXorf58Q96LI9 332 aa7.71□□□□□ -1.18
ATG4A-206ENST00000457035 RBKSQ9H477 322 aa7.71□□□□□ -1.18
ATG4A-206ENST00000457035 ENY2Q9NPA8 101 aa7.71□□□□□ -1.18
ATG4A-206ENST00000457035 IGHV3-21A0A0B4J1V1 117 aa7.7□□□□□ -1.18
ATG4A-206ENST00000457035 CEBPZOSA8MTT3 80 aa7.7□□□□□ -1.18
ATG4A-206ENST00000457035 FAM90A26D6RGX4 464 aa7.7□□□□□ -1.18
ATG4A-206ENST00000457035 F8W735 103 aaPredicted RBP7.7□□□□□ -1.18
ATG4A-206ENST00000457035 INMT-MINDY4F8WBC2 141 aa7.7□□□□□ -1.18
ATG4A-206ENST00000457035 G3V4G9 280 aa7.7□□□□□ -1.18
ATG4A-206ENST00000457035 IFNA21P01568 189 aa7.7□□□□□ -1.18
ATG4A-206ENST00000457035 SPNP16150 400 aa7.7□□□□□ -1.18
ATG4A-206ENST00000457035 HTR2BP41595 481 aa7.7□□□□□ -1.18
ATG4A-206ENST00000457035 HOXA1P49639 335 aaPredicted RBP7.7□□□□□ -1.18
ATG4A-206ENST00000457035 SUB1P53999 127 aaKnown RBP eCLIP7.7□□□□□ -1.18
ATG4A-206ENST00000457035 ID3Q02535 119 aa7.7□□□□□ -1.18
ATG4A-206ENST00000457035 C2orf83Q53S99 150 aa7.7□□□□□ -1.18
ATG4A-206ENST00000457035 C11orf87Q6NUJ2 197 aa7.7□□□□□ -1.18
ATG4A-206ENST00000457035 PLET1Q6UQ28 207 aa7.7□□□□□ -1.18
ATG4A-206ENST00000457035 CLEC19AQ6UXS0 136 aa7.7□□□□□ -1.18
ATG4A-206ENST00000457035 C12orf45Q8N5I9 185 aaPredicted RBP7.7□□□□□ -1.18
ATG4A-206ENST00000457035 TMEM170AQ8WVE7 144 aa7.7□□□□□ -1.18
ATG4A-206ENST00000457035 OR10C1Q96KK4 312 aa7.7□□□□□ -1.18
ATG4A-206ENST00000457035 HEYLQ9NQ87 328 aaPredicted RBP7.7□□□□□ -1.18
ATG4A-206ENST00000457035 PPP5D1E7EU14 171 aa7.69□□□□□ -1.18
ATG4A-206ENST00000457035 OVOL1O14753 267 aa7.69□□□□□ -1.18
ATG4A-206ENST00000457035 OR2C1O95371 312 aa7.69□□□□□ -1.18
ATG4A-206ENST00000457035 MT-CO2P00403 227 aa7.69□□□□□ -1.18
ATG4A-206ENST00000457035 FCGR2BP31994 310 aaPredicted RBP7.69□□□□□ -1.18
ATG4A-206ENST00000457035 MLANAQ16655 118 aa7.69□□□□□ -1.18
ATG4A-206ENST00000457035 OR4D5Q8NGN0 318 aa7.69□□□□□ -1.18
ATG4A-206ENST00000457035 DTD1Q8TEA8 209 aa7.69□□□□□ -1.18
ATG4A-206ENST00000457035 MISP3Q96FF7 219 aa7.69□□□□□ -1.18
ATG4A-206ENST00000457035 ATP6V0BQ99437 205 aa7.69□□□□□ -1.18
ATG4A-206ENST00000457035 MCRIP2Q9BUT9 160 aaKnown RBP7.69□□□□□ -1.18
ATG4A-206ENST00000457035 HIPK2Q9H2X6 1198 aa7.69□□□□□ -1.18
ATG4A-206ENST00000457035 FNDC4Q9H6D8 234 aaPredicted RBP7.69□□□□□ -1.18
ATG4A-206ENST00000457035 PALMDQ9NP74 551 aa7.69□□□□□ -1.18
ATG4A-206ENST00000457035 C21orf62Q9NYP8 219 aa7.69□□□□□ -1.18
ATG4A-206ENST00000457035 U3KQ87 197 aa7.69□□□□□ -1.18
ATG4A-206ENST00000457035 SNRPGP15A8MWD9 76 aa7.68□□□□□ -1.18
ATG4A-206ENST00000457035 SYNGR2O43760 224 aa7.68□□□□□ -1.18
ATG4A-206ENST00000457035 PRAF2O60831 178 aa7.68□□□□□ -1.18
ATG4A-206ENST00000457035 GGCTO75223 188 aaKnown RBP7.68□□□□□ -1.18
ATG4A-206ENST00000457035 MED6O75586 246 aa7.68□□□□□ -1.18
ATG4A-206ENST00000457035 CTSGP08311 255 aa7.68□□□□□ -1.18
ATG4A-206ENST00000457035 ARL3P36405 182 aa7.68□□□□□ -1.18
ATG4A-206ENST00000457035 SYNJ2BPP57105 145 aa7.68□□□□□ -1.18
ATG4A-206ENST00000457035 RPEL1Q2QD12 228 aa7.68□□□□□ -1.18
ATG4A-206ENST00000457035 BEAN1Q3B7T3 259 aa7.68□□□□□ -1.18
ATG4A-206ENST00000457035 KPRPQ5T749 579 aaPredicted RBP7.68□□□□□ -1.18
ATG4A-206ENST00000457035 ACSM6Q6P461 480 aa7.68□□□□□ -1.18
ATG4A-206ENST00000457035 IL34Q6ZMJ4 242 aa7.68□□□□□ -1.18
ATG4A-206ENST00000457035 GPHB5Q86YW7 130 aa7.68□□□□□ -1.18
ATG4A-206ENST00000457035 UXS1Q8NBZ7 420 aa7.68□□□□□ -1.18
ATG4A-206ENST00000457035 SLC24A4Q8NFF2 622 aa7.68□□□□□ -1.18
ATG4A-206ENST00000457035 TXN2Q99757 166 aa7.68□□□□□ -1.18
ATG4A-206ENST00000457035 MAGT1Q9H0U3 335 aa7.68□□□□□ -1.18
ATG4A-206ENST00000457035 OR2T8A6NH00 312 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms