RNA–Protein interactions for RNA: ENST00000456315.6

DEPDC1-202, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene DEPDC1, Length 5,331 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-202ENST00000456315 ANXA2RQ3ZCQ2 193 aa3.69□□□□□ -1.82
DEPDC1-202ENST00000456315 ZNF826PQ6ZT77 177 aa3.69□□□□□ -1.82
DEPDC1-202ENST00000456315 TCTEX1D1Q8N7M0 179 aa3.69□□□□□ -1.82
DEPDC1-202ENST00000456315 C11orf52Q96A22 123 aa3.69□□□□□ -1.82
DEPDC1-202ENST00000456315 SPSB1Q96BD6 273 aa3.69□□□□□ -1.82
DEPDC1-202ENST00000456315 BORCS8Q96FH0 119 aa3.69□□□□□ -1.82
DEPDC1-202ENST00000456315 MBNL3Q9NUK0 354 aaKnown RBP3.69□□□□□ -1.82
DEPDC1-202ENST00000456315 THYN1Q9P016 225 aa3.69□□□□□ -1.82
DEPDC1-202ENST00000456315 PSMB11A5LHX3 300 aa3.69□□□□□ -1.82
DEPDC1-202ENST00000456315 MSR1P21757 451 aa3.69□□□□□ -1.82
DEPDC1-202ENST00000456315 SRP14P37108 136 aaKnown RBP3.69□□□□□ -1.82
DEPDC1-202ENST00000456315 PAFAH1B2P68402 229 aa3.69□□□□□ -1.82
DEPDC1-202ENST00000456315 CEACAM16Q2WEN9 425 aa3.69□□□□□ -1.82
DEPDC1-202ENST00000456315 CHCHD2P9Q5T1J5 151 aaPredicted RBP3.69□□□□□ -1.82
DEPDC1-202ENST00000456315 C10orf128Q5T292 105 aa3.69□□□□□ -1.82
DEPDC1-202ENST00000456315 PRR27Q6MZM9 219 aa3.69□□□□□ -1.82
DEPDC1-202ENST00000456315 SNRNP40Q96DI7 357 aaKnown RBP3.69□□□□□ -1.82
DEPDC1-202ENST00000456315 C19orf24Q9BVV8 132 aa3.69□□□□□ -1.82
DEPDC1-202ENST00000456315 SLC35D1Q9NTN3 355 aa3.69□□□□□ -1.82
DEPDC1-202ENST00000456315 TMEM38BQ9NVV0 291 aa3.69□□□□□ -1.82
DEPDC1-202ENST00000456315 TNRC6BQ9UPQ9 1833 aaKnown RBP3.69□□□□□ -1.82
DEPDC1-202ENST00000456315 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP3.69□□□□□ -1.82
DEPDC1-202ENST00000456315 IGHV1-24A0A0C4DH33 117 aa3.69□□□□□ -1.82
DEPDC1-202ENST00000456315 FAM181BA6NEQ2 426 aa3.69□□□□□ -1.82
DEPDC1-202ENST00000456315 MANSC4A6NHS7 340 aaPredicted RBP3.69□□□□□ -1.82
DEPDC1-202ENST00000456315 LTAP01374 205 aa3.69□□□□□ -1.82
DEPDC1-202ENST00000456315 ADH4P08319 380 aa3.69□□□□□ -1.82
DEPDC1-202ENST00000456315 ARL4DP49703 201 aa3.69□□□□□ -1.82
DEPDC1-202ENST00000456315 TPPP2P59282 170 aa3.69□□□□□ -1.82
DEPDC1-202ENST00000456315 SSBP2P81877 361 aaPredicted RBP3.69□□□□□ -1.82
DEPDC1-202ENST00000456315 PRR20EP86478 221 aa3.69□□□□□ -1.82
DEPDC1-202ENST00000456315 PRR20CP86479 221 aa3.69□□□□□ -1.82
DEPDC1-202ENST00000456315 PRR20DP86480 221 aa3.69□□□□□ -1.82
DEPDC1-202ENST00000456315 PRR20BP86481 221 aa3.69□□□□□ -1.82
DEPDC1-202ENST00000456315 PRR20AP86496 221 aa3.69□□□□□ -1.82
DEPDC1-202ENST00000456315 SIGLECL1Q8N7X8 197 aa3.69□□□□□ -1.82
DEPDC1-202ENST00000456315 RAB37Q96AX2 223 aa3.69□□□□□ -1.82
DEPDC1-202ENST00000456315 C7orf71A4D174 169 aa3.68□□□□□ -1.82
DEPDC1-202ENST00000456315 K7ERJ3 54 aa3.68□□□□□ -1.82
DEPDC1-202ENST00000456315 SP1P08047 785 aa3.68□□□□□ -1.82
DEPDC1-202ENST00000456315 ZNF10P21506 573 aaPredicted RBP3.68□□□□□ -1.82
DEPDC1-202ENST00000456315 VDAC2P45880 294 aaPredicted RBP3.68□□□□□ -1.82
DEPDC1-202ENST00000456315 GPR12P47775 334 aa3.68□□□□□ -1.82
DEPDC1-202ENST00000456315 FXYD2P54710 66 aa3.68□□□□□ -1.82
DEPDC1-202ENST00000456315 RBPJQ06330 500 aa3.68□□□□□ -1.82
DEPDC1-202ENST00000456315 C17orf67Q0P5P2 114 aa3.68□□□□□ -1.82
DEPDC1-202ENST00000456315 WIPI1Q5MNZ9 446 aaPredicted RBP3.68□□□□□ -1.82
DEPDC1-202ENST00000456315 SSX8Q7RTT4 187 aa3.68□□□□□ -1.82
DEPDC1-202ENST00000456315 NUP35Q8NFH5 326 aa3.68□□□□□ -1.82
DEPDC1-202ENST00000456315 OR4S2Q8NH73 311 aa3.68□□□□□ -1.82
DEPDC1-202ENST00000456315 PHLDA1Q8WV24 401 aaPredicted RBP3.68□□□□□ -1.82
DEPDC1-202ENST00000456315 LEAP2Q969E1 77 aa3.68□□□□□ -1.82
DEPDC1-202ENST00000456315 COQ2Q96H96 371 aa3.68□□□□□ -1.82
DEPDC1-202ENST00000456315 DEFB126Q9BYW3 111 aa3.68□□□□□ -1.82
DEPDC1-202ENST00000456315 FGF21Q9NSA1 209 aa3.68□□□□□ -1.82
DEPDC1-202ENST00000456315 IGHV3-43A0A0B4J1X8 118 aa3.68□□□□□ -1.82
DEPDC1-202ENST00000456315 A0A1B0GXF2 115 aa3.68□□□□□ -1.82
DEPDC1-202ENST00000456315 DEFB108AA8MXU0 73 aa3.68□□□□□ -1.82
DEPDC1-202ENST00000456315 C12orf77C9JDV5 145 aa3.68□□□□□ -1.82
DEPDC1-202ENST00000456315 C17orf112F2Z3M2 114 aa3.68□□□□□ -1.82
DEPDC1-202ENST00000456315 H3BTX0 84 aa3.68□□□□□ -1.82
DEPDC1-202ENST00000456315 CHEK1O14757 476 aa3.68□□□□□ -1.82
DEPDC1-202ENST00000456315 TNFSF11O14788 317 aa3.68□□□□□ -1.82
DEPDC1-202ENST00000456315 ACTL6BO94805 426 aa3.68□□□□□ -1.82
DEPDC1-202ENST00000456315 NHLRC4P0CG21 123 aaPredicted RBP3.68□□□□□ -1.82
DEPDC1-202ENST00000456315 IGHV3-43DP0DP04 118 aa3.68□□□□□ -1.82
DEPDC1-202ENST00000456315 SMCPP49901 116 aaPredicted RBP3.68□□□□□ -1.82
DEPDC1-202ENST00000456315 GABRA6Q16445 453 aa3.68□□□□□ -1.82
DEPDC1-202ENST00000456315 MSMPQ1L6U9 139 aa3.68□□□□□ -1.82
DEPDC1-202ENST00000456315 DEFB133Q30KQ1 61 aa3.68□□□□□ -1.82
DEPDC1-202ENST00000456315 KRTAP27-1Q3LI81 207 aa3.68□□□□□ -1.82
DEPDC1-202ENST00000456315 PATE2Q6UY27 113 aa3.68□□□□□ -1.82
DEPDC1-202ENST00000456315 BHLHA15Q7RTS1 189 aaPredicted RBP3.68□□□□□ -1.82
DEPDC1-202ENST00000456315 MRPL52Q86TS9 123 aaKnown RBP3.68□□□□□ -1.82
DEPDC1-202ENST00000456315 CLDN23Q96B33 292 aa3.68□□□□□ -1.82
DEPDC1-202ENST00000456315 ZNF586Q9NXT0 402 aa3.68□□□□□ -1.82
DEPDC1-202ENST00000456315 BET1LQ9NYM9 111 aa3.68□□□□□ -1.82
DEPDC1-202ENST00000456315 SRRM4A7MD48 611 aaKnown RBP3.68□□□□□ -1.82
DEPDC1-202ENST00000456315 PYYP10082 97 aa3.68□□□□□ -1.82
DEPDC1-202ENST00000456315 FCGR2BP31994 310 aaPredicted RBP3.68□□□□□ -1.82
DEPDC1-202ENST00000456315 FGF12P61328 243 aa3.68□□□□□ -1.82
DEPDC1-202ENST00000456315 ADAMTSL5Q6ZMM2 481 aa3.68□□□□□ -1.82
DEPDC1-202ENST00000456315 GGNQ86UU5 652 aa3.68□□□□□ -1.82
DEPDC1-202ENST00000456315 PNKDQ8N490 385 aa3.68□□□□□ -1.82
DEPDC1-202ENST00000456315 ST8SIA1Q92185 356 aa3.68□□□□□ -1.82
DEPDC1-202ENST00000456315 ANAPC16Q96DE5 110 aa3.68□□□□□ -1.82
DEPDC1-202ENST00000456315 NPFFR1Q9GZQ6 430 aa3.68□□□□□ -1.82
DEPDC1-202ENST00000456315 MOB1AQ9H8S9 216 aa3.68□□□□□ -1.82
DEPDC1-202ENST00000456315 H3BUT2 72 aa3.68□□□□□ -1.82
DEPDC1-202ENST00000456315 PLAUP00749 431 aa3.68□□□□□ -1.82
DEPDC1-202ENST00000456315 CELA3AP09093 270 aa3.68□□□□□ -1.82
DEPDC1-202ENST00000456315 PCOLCEQ15113 449 aa3.68□□□□□ -1.82
DEPDC1-202ENST00000456315 ZNF788Q6ZQV5 615 aa3.68□□□□□ -1.82
DEPDC1-202ENST00000456315 OOSP2Q86WS3 158 aa3.68□□□□□ -1.82
DEPDC1-202ENST00000456315 VSTM2AQ8TAG5 236 aa3.68□□□□□ -1.82
DEPDC1-202ENST00000456315 C1QTNF5Q9BXJ0 243 aa3.68□□□□□ -1.82
DEPDC1-202ENST00000456315 MTIF3Q9H2K0 278 aaKnown RBP3.68□□□□□ -1.82
DEPDC1-202ENST00000456315 PGPEP1Q9NXJ5 209 aa3.68□□□□□ -1.82
DEPDC1-202ENST00000456315 ALKBH4Q9NXW9 302 aa3.68□□□□□ -1.82
DEPDC1-202ENST00000456315 HSBP1L1C9JCN9 74 aa3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms