RNA–Protein interactions for RNA: ENST00000454542.5

HDAC4-205, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-205ENST00000454542 PDCD10Q9BUL8 212 aa10.79□□□□□ -0.68
HDAC4-205ENST00000454542 ZNF256Q9Y2P7 627 aaPredicted RBP10.79□□□□□ -0.68
HDAC4-205ENST00000454542 CENPXA8MT69 81 aa10.78□□□□□ -0.68
HDAC4-205ENST00000454542 LYRM1O43325 122 aa10.78□□□□□ -0.68
HDAC4-205ENST00000454542 TGOLN2O43493 480 aa10.78□□□□□ -0.68
HDAC4-205ENST00000454542 IFNA17P01571 189 aa10.78□□□□□ -0.68
HDAC4-205ENST00000454542 HOXA1P49639 335 aaPredicted RBP10.78□□□□□ -0.68
HDAC4-205ENST00000454542 ADAMTSL5Q6ZMM2 481 aa10.78□□□□□ -0.68
HDAC4-205ENST00000454542 MRAPQ8TCY5 172 aa10.78□□□□□ -0.68
HDAC4-205ENST00000454542 BSCL2Q96G97 398 aaPredicted RBP10.78□□□□□ -0.68
HDAC4-205ENST00000454542 ZNF436Q9C0F3 470 aaPredicted RBP10.78□□□□□ -0.68
HDAC4-205ENST00000454542 C21orf62Q9NYP8 219 aa10.78□□□□□ -0.68
HDAC4-205ENST00000454542 PEMTQ9UBM1 199 aa10.78□□□□□ -0.68
HDAC4-205ENST00000454542 HSPB7Q9UBY9 170 aa10.78□□□□□ -0.68
HDAC4-205ENST00000454542 CACFD1Q9UGQ2 172 aa10.78□□□□□ -0.68
HDAC4-205ENST00000454542 PITX3O75364 302 aa10.77□□□□□ -0.69
HDAC4-205ENST00000454542 OR2C1O95371 312 aa10.77□□□□□ -0.69
HDAC4-205ENST00000454542 SLC25A6P12236 298 aa10.77□□□□□ -0.69
HDAC4-205ENST00000454542 VAMP1P23763 118 aa10.77□□□□□ -0.69
HDAC4-205ENST00000454542 SMCO1Q147U7 214 aa10.77□□□□□ -0.69
HDAC4-205ENST00000454542 TATDN3Q17R31 274 aa10.77□□□□□ -0.69
HDAC4-205ENST00000454542 OR4C12Q96R67 309 aa10.77□□□□□ -0.69
HDAC4-205ENST00000454542 WDR12Q9GZL7 423 aaKnown RBP10.77□□□□□ -0.69
HDAC4-205ENST00000454542 FLVCR2Q9UPI3 526 aa10.77□□□□□ -0.69
HDAC4-205ENST00000454542 A0A1B0GU03 582 aa10.76□□□□□ -0.69
HDAC4-205ENST00000454542 LINC00854A0A1B0GVQ3 168 aa10.76□□□□□ -0.69
HDAC4-205ENST00000454542 TMEM213A2RRL7 107 aa10.76□□□□□ -0.69
HDAC4-205ENST00000454542 C9orf170A2RU37 121 aa10.76□□□□□ -0.69
HDAC4-205ENST00000454542 CORTO00230 105 aa10.76□□□□□ -0.69
HDAC4-205ENST00000454542 MT-CO2P00403 227 aa10.76□□□□□ -0.69
HDAC4-205ENST00000454542 CLEC3BP05452 202 aa10.76□□□□□ -0.69
HDAC4-205ENST00000454542 ADMP35318 185 aa10.76□□□□□ -0.69
HDAC4-205ENST00000454542 TNFRSF9Q07011 255 aa10.76□□□□□ -0.69
HDAC4-205ENST00000454542 DHRS2Q13268 280 aa10.76□□□□□ -0.69
HDAC4-205ENST00000454542 SPSB3Q6PJ21 355 aa10.76□□□□□ -0.69
HDAC4-205ENST00000454542 HAPLN4Q86UW8 402 aa10.76□□□□□ -0.69
HDAC4-205ENST00000454542 TMEM190Q8WZ59 177 aa10.76□□□□□ -0.69
HDAC4-205ENST00000454542 PRR25Q96S07 402 aa10.76□□□□□ -0.69
HDAC4-205ENST00000454542 TXN2Q99757 166 aa10.76□□□□□ -0.69
HDAC4-205ENST00000454542 C20orf85Q9H1P6 137 aa10.76□□□□□ -0.69
HDAC4-205ENST00000454542 TBC1D24Q9ULP9 559 aa10.76□□□□□ -0.69
HDAC4-205ENST00000454542 TMED3Q9Y3Q3 217 aa10.76□□□□□ -0.69
HDAC4-205ENST00000454542 LSM4Q9Y4Z0 139 aaKnown RBP10.76□□□□□ -0.69
HDAC4-205ENST00000454542 IGHV3-21A0A0B4J1V1 117 aa10.75□□□□□ -0.69
HDAC4-205ENST00000454542 OR2T8A6NH00 312 aa10.75□□□□□ -0.69
HDAC4-205ENST00000454542 C2orf70A6NJV1 201 aa10.75□□□□□ -0.69
HDAC4-205ENST00000454542 SPNP16150 400 aa10.75□□□□□ -0.69
HDAC4-205ENST00000454542 UNQ9165/PRO28630Q6UXU0 137 aa10.75□□□□□ -0.69
HDAC4-205ENST00000454542 LYG2Q86SG7 212 aa10.75□□□□□ -0.69
HDAC4-205ENST00000454542 OR2K2Q8NGT1 345 aa10.75□□□□□ -0.69
HDAC4-205ENST00000454542 TMEM170AQ8WVE7 144 aa10.75□□□□□ -0.69
HDAC4-205ENST00000454542 MISP3Q96FF7 219 aa10.75□□□□□ -0.69
HDAC4-205ENST00000454542 CHRDL1Q9BU40 450 aa10.75□□□□□ -0.69
HDAC4-205ENST00000454542 FNDC4Q9H6D8 234 aaPredicted RBP10.75□□□□□ -0.69
HDAC4-205ENST00000454542 ENY2Q9NPA8 101 aa10.75□□□□□ -0.69
HDAC4-205ENST00000454542 OR4E1P0C645 316 aa10.74□□□□□ -0.69
HDAC4-205ENST00000454542 GP9P14770 177 aa10.74□□□□□ -0.69
HDAC4-205ENST00000454542 ANXA7P20073 488 aaKnown RBP10.74□□□□□ -0.69
HDAC4-205ENST00000454542 EDN2P20800 178 aa10.74□□□□□ -0.69
HDAC4-205ENST00000454542 SNCAP37840 140 aa10.74□□□□□ -0.69
HDAC4-205ENST00000454542 HTR2BP41595 481 aa10.74□□□□□ -0.69
HDAC4-205ENST00000454542 ELLP55199 621 aaPredicted RBP10.74□□□□□ -0.69
HDAC4-205ENST00000454542 ASAH1Q13510 395 aa10.74□□□□□ -0.69
HDAC4-205ENST00000454542 DCTN2Q13561 401 aaKnown RBP10.74□□□□□ -0.69
HDAC4-205ENST00000454542 ZNF846Q147U1 533 aa10.74□□□□□ -0.69
HDAC4-205ENST00000454542 C2orf83Q53S99 150 aa10.74□□□□□ -0.69
HDAC4-205ENST00000454542 C11orf87Q6NUJ2 197 aa10.74□□□□□ -0.69
HDAC4-205ENST00000454542 PLET1Q6UQ28 207 aa10.74□□□□□ -0.69
HDAC4-205ENST00000454542 SLC24A4Q8NFF2 622 aa10.74□□□□□ -0.69
HDAC4-205ENST00000454542 ZC4H2Q9NQZ6 224 aa10.74□□□□□ -0.69
HDAC4-205ENST00000454542 GAR1Q9NY12 217 aaKnown RBP10.74□□□□□ -0.69
HDAC4-205ENST00000454542 FAM90A26D6RGX4 464 aa10.73□□□□□ -0.69
HDAC4-205ENST00000454542 NDUFA4O00483 81 aa10.73□□□□□ -0.69
HDAC4-205ENST00000454542 UPK1BO75841 260 aa10.73□□□□□ -0.69
HDAC4-205ENST00000454542 CTSGP08311 255 aa10.73□□□□□ -0.69
HDAC4-205ENST00000454542 C8orf88P0DMB2 117 aa10.73□□□□□ -0.69
HDAC4-205ENST00000454542 SUB1P53999 127 aaKnown RBP eCLIP10.73□□□□□ -0.69
HDAC4-205ENST00000454542 MFAP4P55083 255 aa10.73□□□□□ -0.69
HDAC4-205ENST00000454542 FAM106AQ4KMX7 169 aa10.73□□□□□ -0.69
HDAC4-205ENST00000454542 Q56UQ5 140 aa10.73□□□□□ -0.69
HDAC4-205ENST00000454542 SORL1Q92673 2214 aa10.73□□□□□ -0.69
HDAC4-205ENST00000454542 CEBPZOSA8MTT3 80 aa10.72□□□□□ -0.69
HDAC4-205ENST00000454542 NXPH3O95157 252 aa10.72□□□□□ -0.69
HDAC4-205ENST00000454542 TCRBP04435 133 aa10.72□□□□□ -0.69
HDAC4-205ENST00000454542 FOLR2P14207 255 aa10.72□□□□□ -0.69
HDAC4-205ENST00000454542 NPY1RP25929 384 aa10.72□□□□□ -0.69
HDAC4-205ENST00000454542 IFITM3Q01628 133 aa10.72□□□□□ -0.69
HDAC4-205ENST00000454542 GGNBP1Q5YKI7 109 aa10.72□□□□□ -0.69
HDAC4-205ENST00000454542 RNASEH2CQ8TDP1 164 aaKnown RBP10.72□□□□□ -0.69
HDAC4-205ENST00000454542 DTD1Q8TEA8 209 aa10.72□□□□□ -0.69
HDAC4-205ENST00000454542 MITD1Q8WV92 249 aa10.72□□□□□ -0.69
HDAC4-205ENST00000454542 CACNG8Q8WXS5 425 aa10.72□□□□□ -0.69
HDAC4-205ENST00000454542 PINX1Q96BK5 328 aaKnown RBP10.72□□□□□ -0.69
HDAC4-205ENST00000454542 RBKSQ9H477 322 aa10.72□□□□□ -0.69
HDAC4-205ENST00000454542 HEYLQ9NQ87 328 aaPredicted RBP10.72□□□□□ -0.69
HDAC4-205ENST00000454542 MRPL36Q9P0J6 103 aaKnown RBP10.72□□□□□ -0.69
HDAC4-205ENST00000454542 DEFB114Q30KQ6 69 aa10.71□□□□□ -0.69
HDAC4-205ENST00000454542 LCN12Q6JVE5 192 aa10.71□□□□□ -0.69
HDAC4-205ENST00000454542 UBAC2Q8NBM4 344 aa10.71□□□□□ -0.69
HDAC4-205ENST00000454542 OR1S1Q8NH92 325 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms