RNA–Protein interactions for RNA: ENST00000453937.2

LAMA4-209, Transcript of laminin subunit alpha 4, humanhuman

TSL 1 (best) BASIC

Gene LAMA4, Length 645 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-209ENST00000453937 DEFA4P12838 97 aa11.25□□□□□ -0.61
LAMA4-209ENST00000453937 ATP5IP56385 69 aaPredicted RBP11.25□□□□□ -0.61
LAMA4-209ENST00000453937 TAS2R30P59541 319 aa11.25□□□□□ -0.61
LAMA4-209ENST00000453937 CYCSP99999 105 aaKnown RBP11.25□□□□□ -0.61
LAMA4-209ENST00000453937 SLC25A24Q6NUK1 477 aa11.25□□□□□ -0.61
LAMA4-209ENST00000453937 ZNF343Q6P1L6 599 aa11.25□□□□□ -0.61
LAMA4-209ENST00000453937 SLC24A4Q8NFF2 622 aa11.25□□□□□ -0.61
LAMA4-209ENST00000453937 CIB3Q96Q77 187 aaPredicted RBP11.25□□□□□ -0.61
LAMA4-209ENST00000453937 RAB40CQ96S21 281 aa11.25□□□□□ -0.61
LAMA4-209ENST00000453937 RNF126Q9BV68 326 aa11.25□□□□□ -0.61
LAMA4-209ENST00000453937 HIPK2Q9H2X6 1198 aa11.25□□□□□ -0.61
LAMA4-209ENST00000453937 FNDC4Q9H6D8 234 aaPredicted RBP11.25□□□□□ -0.61
LAMA4-209ENST00000453937 MFSD2BA6NFX1 497 aa11.24□□□□□ -0.61
LAMA4-209ENST00000453937 PMS2P5A8MQ11 134 aa11.24□□□□□ -0.61
LAMA4-209ENST00000453937 F8W735 103 aaPredicted RBP11.24□□□□□ -0.61
LAMA4-209ENST00000453937 SSSCA1O60232 199 aa11.24□□□□□ -0.61
LAMA4-209ENST00000453937 SCGB1D2O95969 90 aa11.24□□□□□ -0.61
LAMA4-209ENST00000453937 NPY1RP25929 384 aa11.24□□□□□ -0.61
LAMA4-209ENST00000453937 SNCAP37840 140 aa11.24□□□□□ -0.61
LAMA4-209ENST00000453937 C15orf32Q32M92 178 aa11.24□□□□□ -0.61
LAMA4-209ENST00000453937 VN1R17PQ8TDU5 208 aa11.24□□□□□ -0.61
LAMA4-209ENST00000453937 C4orf3Q8WVX3 66 aa11.24□□□□□ -0.61
LAMA4-209ENST00000453937 CCDC140Q96MF4 163 aa11.24□□□□□ -0.61
LAMA4-209ENST00000453937 VWFP04275 2813 aa11.24□□□□□ -0.61
LAMA4-209ENST00000453937 A0A0G2JLM5 398 aa11.23□□□□□ -0.61
LAMA4-209ENST00000453937 DEDDO75618 318 aa11.23□□□□□ -0.61
LAMA4-209ENST00000453937 LGALS1P09382 135 aaKnown RBP11.23□□□□□ -0.61
LAMA4-209ENST00000453937 SUB1P53999 127 aaKnown RBP eCLIP11.23□□□□□ -0.61
LAMA4-209ENST00000453937 ATP5G2Q06055 141 aa11.23□□□□□ -0.61
LAMA4-209ENST00000453937 TMEM14EPQ6UXP3 125 aa11.23□□□□□ -0.61
LAMA4-209ENST00000453937 ETV3LQ6ZN32 361 aa11.23□□□□□ -0.61
LAMA4-209ENST00000453937 ZNF502Q8TBZ5 544 aa11.23□□□□□ -0.61
LAMA4-209ENST00000453937 RNASEH2CQ8TDP1 164 aaKnown RBP11.23□□□□□ -0.61
LAMA4-209ENST00000453937 SCARB1Q8WTV0 552 aa11.23□□□□□ -0.61
LAMA4-209ENST00000453937 PPP1R1CQ8WVI7 109 aa11.23□□□□□ -0.61
LAMA4-209ENST00000453937 ZNF414Q96IQ9 312 aa11.23□□□□□ -0.61
LAMA4-209ENST00000453937 ZNF436Q9C0F3 470 aaPredicted RBP11.23□□□□□ -0.61
LAMA4-209ENST00000453937 MRPL36Q9P0J6 103 aaKnown RBP11.23□□□□□ -0.61
LAMA4-209ENST00000453937 LSM5Q9Y4Y9 91 aaKnown RBP11.23□□□□□ -0.61
LAMA4-209ENST00000453937 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.22□□□□□ -0.61
LAMA4-209ENST00000453937 TRAV14DV4A0A0A6YYC5 116 aa11.22□□□□□ -0.61
LAMA4-209ENST00000453937 A0A1B0GVG6 124 aa11.22□□□□□ -0.61
LAMA4-209ENST00000453937 G3V3Q6 166 aa11.22□□□□□ -0.61
LAMA4-209ENST00000453937 TSC22D2O75157 780 aa11.22□□□□□ -0.61
LAMA4-209ENST00000453937 MPC2O95563 127 aa11.22□□□□□ -0.61
LAMA4-209ENST00000453937 MT-CO2P00403 227 aa11.22□□□□□ -0.61
LAMA4-209ENST00000453937 IFNA10P01566 189 aa11.22□□□□□ -0.61
LAMA4-209ENST00000453937 IGHV3-11P01762 117 aa11.22□□□□□ -0.61
LAMA4-209ENST00000453937 GIPP09681 153 aaPredicted RBP11.22□□□□□ -0.61
LAMA4-209ENST00000453937 LYL1P12980 280 aa11.22□□□□□ -0.61
LAMA4-209ENST00000453937 EXOSC2Q13868 293 aaKnown RBP11.22□□□□□ -0.61
LAMA4-209ENST00000453937 MLANAQ16655 118 aa11.22□□□□□ -0.61
LAMA4-209ENST00000453937 Q5BKY6 102 aa11.22□□□□□ -0.61
LAMA4-209ENST00000453937 KLHL30-AS1Q8NEE0 82 aa11.22□□□□□ -0.61
LAMA4-209ENST00000453937 MISP3Q96FF7 219 aa11.22□□□□□ -0.61
LAMA4-209ENST00000453937 PSENENQ9NZ42 101 aa11.22□□□□□ -0.61
LAMA4-209ENST00000453937 OR5AC2Q9NZP5 309 aa11.22□□□□□ -0.61
LAMA4-209ENST00000453937 THYN1Q9P016 225 aa11.22□□□□□ -0.61
LAMA4-209ENST00000453937 S4R3C0 116 aa11.22□□□□□ -0.61
LAMA4-209ENST00000453937 A0A1W2PRX2 142 aa11.21□□□□□ -0.61
LAMA4-209ENST00000453937 H3BP45 60 aa11.21□□□□□ -0.61
LAMA4-209ENST00000453937 CORTO00230 105 aa11.21□□□□□ -0.61
LAMA4-209ENST00000453937 CYB5BO43169 146 aa11.21□□□□□ -0.61
LAMA4-209ENST00000453937 CCNKO75909 580 aa11.21□□□□□ -0.61
LAMA4-209ENST00000453937 TRBV12-3P01733 135 aa11.21□□□□□ -0.61
LAMA4-209ENST00000453937 FCGR2BP31994 310 aaPredicted RBP11.21□□□□□ -0.61
LAMA4-209ENST00000453937 FHL3Q13643 280 aa11.21□□□□□ -0.61
LAMA4-209ENST00000453937 NSUN5P1Q3KNT7 163 aa11.21□□□□□ -0.61
LAMA4-209ENST00000453937 SPANXN5Q5MJ07 72 aa11.21□□□□□ -0.61
LAMA4-209ENST00000453937 C8orf86Q6ZUL3 223 aa11.21□□□□□ -0.61
LAMA4-209ENST00000453937 HAPLN4Q86UW8 402 aa11.21□□□□□ -0.61
LAMA4-209ENST00000453937 ASB13Q8WXK3 278 aa11.21□□□□□ -0.61
LAMA4-209ENST00000453937 RAX2Q96IS3 184 aa11.21□□□□□ -0.61
LAMA4-209ENST00000453937 CXorf58Q96LI9 332 aa11.21□□□□□ -0.61
LAMA4-209ENST00000453937 OR5B12Q96R08 314 aa11.21□□□□□ -0.61
LAMA4-209ENST00000453937 ATP6V0BQ99437 205 aa11.21□□□□□ -0.61
LAMA4-209ENST00000453937 TRBV7-1A0A0A6YYK4 115 aa11.2□□□□□ -0.62
LAMA4-209ENST00000453937 IGHV3-21A0A0B4J1V1 117 aa11.2□□□□□ -0.62
LAMA4-209ENST00000453937 S100A10P60903 97 aa11.2□□□□□ -0.62
LAMA4-209ENST00000453937 CD69Q07108 199 aa11.2□□□□□ -0.62
LAMA4-209ENST00000453937 ARL16Q0P5N6 197 aa11.2□□□□□ -0.62
LAMA4-209ENST00000453937 DEFB136Q30KP8 78 aa11.2□□□□□ -0.62
LAMA4-209ENST00000453937 KHDC1LQ5JSQ8 128 aa11.2□□□□□ -0.62
LAMA4-209ENST00000453937 NOXA1Q86UR1 476 aa11.2□□□□□ -0.62
LAMA4-209ENST00000453937 LYRM2Q9NU23 88 aaPredicted RBP11.2□□□□□ -0.62
LAMA4-209ENST00000453937 STRAPQ9Y3F4 350 aaKnown RBP11.2□□□□□ -0.62
LAMA4-209ENST00000453937 FAM24AA6NFZ4 105 aa11.19□□□□□ -0.62
LAMA4-209ENST00000453937 BMPR1BO00238 502 aa11.19□□□□□ -0.62
LAMA4-209ENST00000453937 IGHV3-48P01763 117 aa11.19□□□□□ -0.62
LAMA4-209ENST00000453937 IGHV3-23P01764 117 aa11.19□□□□□ -0.62
LAMA4-209ENST00000453937 RAP2BP61225 183 aa11.19□□□□□ -0.62
LAMA4-209ENST00000453937 LRRC37A5PQ49AS3 106 aa11.19□□□□□ -0.62
LAMA4-209ENST00000453937 PRSS54Q6PEW0 395 aa11.19□□□□□ -0.62
LAMA4-209ENST00000453937 EEF1AKMT3Q96AZ1 226 aa11.19□□□□□ -0.62
LAMA4-209ENST00000453937 C21orf62Q9NYP8 219 aa11.19□□□□□ -0.62
LAMA4-209ENST00000453937 IGHV4OR15-8A0A075B7B6 117 aa11.18□□□□□ -0.62
LAMA4-209ENST00000453937 A0A087WW49 117 aa11.18□□□□□ -0.62
LAMA4-209ENST00000453937 IGSF23A1L1A6 192 aa11.18□□□□□ -0.62
LAMA4-209ENST00000453937 NUDT19A8MXV4 375 aa11.18□□□□□ -0.62
LAMA4-209ENST00000453937 E5RGE8 158 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms