RNA–Protein interactions for RNA: ENST00000452182.1

SCN9A-204, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

TSL 1 (best)

Gene SCN9A, Length 1,618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-204ENST00000452182 TPPP2P59282 170 aa9.01□□□□□ -0.97
SCN9A-204ENST00000452182 RPP30P78346 268 aaKnown RBP9.01□□□□□ -0.97
SCN9A-204ENST00000452182 RAB32Q13637 225 aa9.01□□□□□ -0.97
SCN9A-204ENST00000452182 C19orf35Q6ZS72 473 aa9.01□□□□□ -0.97
SCN9A-204ENST00000452182 ZNF491Q8N8L2 437 aa9.01□□□□□ -0.97
SCN9A-204ENST00000452182 MS4A10Q96PG2 267 aa9.01□□□□□ -0.97
SCN9A-204ENST00000452182 ZNF436Q9C0F3 470 aaPredicted RBP9.01□□□□□ -0.97
SCN9A-204ENST00000452182 COL6A5A8TX70 2615 aa9.01□□□□□ -0.97
SCN9A-204ENST00000452182 TCRBV4S1A1TA0A5B7 111 aa9□□□□□ -0.97
SCN9A-204ENST00000452182 ADARB2-AS1A8MUL3 147 aa9□□□□□ -0.97
SCN9A-204ENST00000452182 SSSCA1O60232 199 aa9□□□□□ -0.97
SCN9A-204ENST00000452182 GIPP09681 153 aaPredicted RBP9□□□□□ -0.97
SCN9A-204ENST00000452182 IAPPP10997 89 aa9□□□□□ -0.97
SCN9A-204ENST00000452182 NPY1RP25929 384 aa9□□□□□ -0.97
SCN9A-204ENST00000452182 PAX9P55771 341 aa9□□□□□ -0.97
SCN9A-204ENST00000452182 RHOGP84095 191 aa9□□□□□ -0.97
SCN9A-204ENST00000452182 SLC25A24Q6NUK1 477 aa9□□□□□ -0.97
SCN9A-204ENST00000452182 C3orf56Q8N813 242 aa9□□□□□ -0.97
SCN9A-204ENST00000452182 TMEM170AQ8WVE7 144 aa9□□□□□ -0.97
SCN9A-204ENST00000452182 PPP1R1CQ8WVI7 109 aa9□□□□□ -0.97
SCN9A-204ENST00000452182 CITED2Q99967 270 aaPredicted RBP9□□□□□ -0.97
SCN9A-204ENST00000452182 C11orf1Q9H5F2 150 aa9□□□□□ -0.97
SCN9A-204ENST00000452182 TSSC4Q9Y5U2 329 aaPredicted RBP9□□□□□ -0.97
SCN9A-204ENST00000452182 TSC22D2O75157 780 aa8.99□□□□□ -0.97
SCN9A-204ENST00000452182 OR2J3O76001 311 aa8.99□□□□□ -0.97
SCN9A-204ENST00000452182 TMEM50AO95807 157 aa8.99□□□□□ -0.97
SCN9A-204ENST00000452182 IFNA10P01566 189 aa8.99□□□□□ -0.97
SCN9A-204ENST00000452182 PVALBP20472 110 aaPredicted RBP8.99□□□□□ -0.97
SCN9A-204ENST00000452182 RPL23AP62750 156 aaKnown RBP8.99□□□□□ -0.97
SCN9A-204ENST00000452182 C11orf87Q6NUJ2 197 aa8.99□□□□□ -0.97
SCN9A-204ENST00000452182 SHISA2Q6UWI4 295 aa8.99□□□□□ -0.97
SCN9A-204ENST00000452182 LCNL1Q6ZST4 164 aa8.99□□□□□ -0.97
SCN9A-204ENST00000452182 NDUFA11Q86Y39 141 aa8.99□□□□□ -0.97
SCN9A-204ENST00000452182 RNASEH2CQ8TDP1 164 aaKnown RBP8.99□□□□□ -0.97
SCN9A-204ENST00000452182 VN1R17PQ8TDU5 208 aa8.99□□□□□ -0.97
SCN9A-204ENST00000452182 CHAC2Q8WUX2 184 aa8.99□□□□□ -0.97
SCN9A-204ENST00000452182 CXorf58Q96LI9 332 aa8.99□□□□□ -0.97
SCN9A-204ENST00000452182 FBXL7Q9UJT9 491 aa8.99□□□□□ -0.97
SCN9A-204ENST00000452182 LSM5Q9Y4Y9 91 aaKnown RBP8.99□□□□□ -0.97
SCN9A-204ENST00000452182 C15orf62A8K5M9 175 aa8.98□□□□□ -0.97
SCN9A-204ENST00000452182 DEDDO75618 318 aa8.98□□□□□ -0.97
SCN9A-204ENST00000452182 MPC2O95563 127 aa8.98□□□□□ -0.97
SCN9A-204ENST00000452182 RLN2P04090 185 aa8.98□□□□□ -0.97
SCN9A-204ENST00000452182 PET100P0DJ07 73 aa8.98□□□□□ -0.97
SCN9A-204ENST00000452182 S100A10P60903 97 aa8.98□□□□□ -0.97
SCN9A-204ENST00000452182 RAP2BP61225 183 aa8.98□□□□□ -0.97
SCN9A-204ENST00000452182 RUNX1Q01196 453 aa8.98□□□□□ -0.97
SCN9A-204ENST00000452182 EXOSC2Q13868 293 aaKnown RBP8.98□□□□□ -0.97
SCN9A-204ENST00000452182 C15orf32Q32M92 178 aa8.98□□□□□ -0.97
SCN9A-204ENST00000452182 FAM209BQ5JX69 171 aa8.98□□□□□ -0.97
SCN9A-204ENST00000452182 C11orf44Q8N8P7 122 aa8.98□□□□□ -0.97
SCN9A-204ENST00000452182 WDR89Q96FK6 387 aaPredicted RBP8.98□□□□□ -0.97
SCN9A-204ENST00000452182 ATP6V0BQ99437 205 aa8.98□□□□□ -0.97
SCN9A-204ENST00000452182 PSENENQ9NZ42 101 aa8.98□□□□□ -0.97
SCN9A-204ENST00000452182 I3L2K1 104 aa8.98□□□□□ -0.97
SCN9A-204ENST00000452182 K7EIM0 57 aa8.98□□□□□ -0.97
SCN9A-204ENST00000452182 L7N2F9 121 aa8.98□□□□□ -0.97
SCN9A-204ENST00000452182 NDUFB8O95169 186 aa8.98□□□□□ -0.97
SCN9A-204ENST00000452182 RAB11AP62491 216 aa8.98□□□□□ -0.97
SCN9A-204ENST00000452182 VAMP2P63027 116 aa8.98□□□□□ -0.97
SCN9A-204ENST00000452182 ATP5G2Q06055 141 aa8.98□□□□□ -0.97
SCN9A-204ENST00000452182 SPANXN5Q5MJ07 72 aa8.98□□□□□ -0.97
SCN9A-204ENST00000452182 ZNF343Q6P1L6 599 aa8.98□□□□□ -0.97
SCN9A-204ENST00000452182 TMEM14EPQ6UXP3 125 aa8.98□□□□□ -0.97
SCN9A-204ENST00000452182 C4orf3Q8WVX3 66 aa8.98□□□□□ -0.97
SCN9A-204ENST00000452182 OR4C12Q96R67 309 aa8.98□□□□□ -0.97
SCN9A-204ENST00000452182 STRAPQ9Y3F4 350 aaKnown RBP8.98□□□□□ -0.97
SCN9A-204ENST00000452182 TRBV7-1A0A0A6YYK4 115 aa8.97□□□□□ -0.97
SCN9A-204ENST00000452182 E5RGE8 158 aa8.97□□□□□ -0.97
SCN9A-204ENST00000452182 H0YIZ8 118 aa8.97□□□□□ -0.97
SCN9A-204ENST00000452182 MT-CO2P00403 227 aa8.97□□□□□ -0.97
SCN9A-204ENST00000452182 LGALS1P09382 135 aaKnown RBP8.97□□□□□ -0.97
SCN9A-204ENST00000452182 LYL1P12980 280 aa8.97□□□□□ -0.97
SCN9A-204ENST00000452182 FCGR2BP31994 310 aaPredicted RBP8.97□□□□□ -0.97
SCN9A-204ENST00000452182 FGL1Q08830 312 aa8.97□□□□□ -0.97
SCN9A-204ENST00000452182 LRRC37A5PQ49AS3 106 aa8.97□□□□□ -0.97
SCN9A-204ENST00000452182 KHDC1LQ5JSQ8 128 aa8.97□□□□□ -0.97
SCN9A-204ENST00000452182 PRSS54Q6PEW0 395 aa8.97□□□□□ -0.97
SCN9A-204ENST00000452182 SCARB1Q8WTV0 552 aa8.97□□□□□ -0.97
SCN9A-204ENST00000452182 EEF1AKMT3Q96AZ1 226 aa8.97□□□□□ -0.97
SCN9A-204ENST00000452182 MISP3Q96FF7 219 aa8.97□□□□□ -0.97
SCN9A-204ENST00000452182 LYRM2Q9NU23 88 aaPredicted RBP8.97□□□□□ -0.97
SCN9A-204ENST00000452182 RPS10-NUDT3A0A1W2PQS6 291 aa8.96□□□□□ -0.98
SCN9A-204ENST00000452182 H3BP45 60 aa8.96□□□□□ -0.98
SCN9A-204ENST00000452182 I3L521 148 aa8.96□□□□□ -0.98
SCN9A-204ENST00000452182 SCAF4O95104 1147 aaKnown RBP8.96□□□□□ -0.98
SCN9A-204ENST00000452182 IFNA4P05014 189 aa8.96□□□□□ -0.98
SCN9A-204ENST00000452182 OR8U8P0C7N1 319 aa8.96□□□□□ -0.98
SCN9A-204ENST00000452182 P2RY1P47900 373 aa8.96□□□□□ -0.98
SCN9A-204ENST00000452182 ETFRF1Q6IPR1 90 aa8.96□□□□□ -0.98
SCN9A-204ENST00000452182 ETV3LQ6ZN32 361 aa8.96□□□□□ -0.98
SCN9A-204ENST00000452182 KLHL30-AS1Q8NEE0 82 aa8.96□□□□□ -0.98
SCN9A-204ENST00000452182 ZNF502Q8TBZ5 544 aa8.96□□□□□ -0.98
SCN9A-204ENST00000452182 CACNG8Q8WXS5 425 aa8.96□□□□□ -0.98
SCN9A-204ENST00000452182 RNF126Q9BV68 326 aa8.96□□□□□ -0.98
SCN9A-204ENST00000452182 FNDC4Q9H6D8 234 aaPredicted RBP8.96□□□□□ -0.98
SCN9A-204ENST00000452182 GNB4Q9HAV0 340 aa8.96□□□□□ -0.98
SCN9A-204ENST00000452182 OR5AC2Q9NZP5 309 aa8.96□□□□□ -0.98
SCN9A-204ENST00000452182 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.95□□□□□ -0.98
SCN9A-204ENST00000452182 MFSD2BA6NFX1 497 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms