RNA–Protein interactions for RNA: ENST00000451053.2

VPS33A-202, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 3 BASIC

Gene VPS33A, Length 1,154 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-202ENST00000451053 SUB1P53999 127 aaKnown RBP eCLIP10.17□□□□□ -0.78
VPS33A-202ENST00000451053 BAXQ07812 192 aa10.17□□□□□ -0.78
VPS33A-202ENST00000451053 FOXE3Q13461 319 aa10.17□□□□□ -0.78
VPS33A-202ENST00000451053 OR2F1Q13607 317 aa10.17□□□□□ -0.78
VPS33A-202ENST00000451053 ZNF345Q14585 488 aa10.17□□□□□ -0.78
VPS33A-202ENST00000451053 SPINK9Q5DT21 86 aa10.17□□□□□ -0.78
VPS33A-202ENST00000451053 SHISA2Q6UWI4 295 aa10.17□□□□□ -0.78
VPS33A-202ENST00000451053 TTC9CQ8N5M4 171 aa10.17□□□□□ -0.78
VPS33A-202ENST00000451053 COMMD1Q8N668 190 aa10.17□□□□□ -0.78
VPS33A-202ENST00000451053 OR11H4Q8NGC9 324 aa10.17□□□□□ -0.78
VPS33A-202ENST00000451053 TMEM68Q96MH6 324 aa10.17□□□□□ -0.78
VPS33A-202ENST00000451053 AQP10Q96PS8 301 aa10.17□□□□□ -0.78
VPS33A-202ENST00000451053 MFFQ9GZY8 342 aa10.17□□□□□ -0.78
VPS33A-202ENST00000451053 KLK15Q9H2R5 256 aa10.17□□□□□ -0.78
VPS33A-202ENST00000451053 TCRBV4S1A1TA0A5B7 111 aa10.16□□□□□ -0.78
VPS33A-202ENST00000451053 IFNA10P01566 189 aa10.16□□□□□ -0.78
VPS33A-202ENST00000451053 ELANEP08246 267 aa10.16□□□□□ -0.78
VPS33A-202ENST00000451053 PF4V1P10720 104 aa10.16□□□□□ -0.78
VPS33A-202ENST00000451053 PAX9P55771 341 aa10.16□□□□□ -0.78
VPS33A-202ENST00000451053 RAB11AP62491 216 aa10.16□□□□□ -0.78
VPS33A-202ENST00000451053 WT1-ASQ06250 92 aa10.16□□□□□ -0.78
VPS33A-202ENST00000451053 KHDC1LQ5JSQ8 128 aa10.16□□□□□ -0.78
VPS33A-202ENST00000451053 SPANXN5Q5MJ07 72 aa10.16□□□□□ -0.78
VPS33A-202ENST00000451053 RNF152Q8N8N0 203 aa10.16□□□□□ -0.78
VPS33A-202ENST00000451053 SLC24A4Q8NFF2 622 aa10.16□□□□□ -0.78
VPS33A-202ENST00000451053 SPATA3Q8NHX4 192 aa10.16□□□□□ -0.78
VPS33A-202ENST00000451053 MS4A10Q96PG2 267 aa10.16□□□□□ -0.78
VPS33A-202ENST00000451053 ZNF355PQ9NSJ1 428 aa10.16□□□□□ -0.78
VPS33A-202ENST00000451053 A0A1W2PRX2 142 aa10.15□□□□□ -0.78
VPS33A-202ENST00000451053 NPIPB5A8MRT5 1133 aa10.15□□□□□ -0.78
VPS33A-202ENST00000451053 ADARB2-AS1A8MUL3 147 aa10.15□□□□□ -0.78
VPS33A-202ENST00000451053 H3BP45 60 aa10.15□□□□□ -0.78
VPS33A-202ENST00000451053 CYB5BO43169 146 aa10.15□□□□□ -0.78
VPS33A-202ENST00000451053 TMEM50AO95807 157 aa10.15□□□□□ -0.78
VPS33A-202ENST00000451053 PRH1P02810 166 aa10.15□□□□□ -0.78
VPS33A-202ENST00000451053 OR8U8P0C7N1 319 aa10.15□□□□□ -0.78
VPS33A-202ENST00000451053 OR13C7P0DN81 318 aa10.15□□□□□ -0.78
VPS33A-202ENST00000451053 NPY1RP25929 384 aa10.15□□□□□ -0.78
VPS33A-202ENST00000451053 SULT1A1P50225 295 aa10.15□□□□□ -0.78
VPS33A-202ENST00000451053 RAB9AP51151 201 aa10.15□□□□□ -0.78
VPS33A-202ENST00000451053 HBG1P69891 147 aa10.15□□□□□ -0.78
VPS33A-202ENST00000451053 HBG2P69892 147 aa10.15□□□□□ -0.78
VPS33A-202ENST00000451053 DEFA5Q01523 94 aa10.15□□□□□ -0.78
VPS33A-202ENST00000451053 ZNF114Q8NC26 417 aa10.15□□□□□ -0.78
VPS33A-202ENST00000451053 OR1L6Q8NGR2 347 aa10.15□□□□□ -0.78
VPS33A-202ENST00000451053 MYOZ3Q8TDC0 251 aa10.15□□□□□ -0.78
VPS33A-202ENST00000451053 COL6A5A8TX70 2615 aa10.15□□□□□ -0.79
VPS33A-202ENST00000451053 RNF222A6NCQ9 220 aa10.14□□□□□ -0.79
VPS33A-202ENST00000451053 FAM24AA6NFZ4 105 aa10.14□□□□□ -0.79
VPS33A-202ENST00000451053 H3BUA1 57 aa10.14□□□□□ -0.79
VPS33A-202ENST00000451053 CRYGCP07315 174 aa10.14□□□□□ -0.79
VPS33A-202ENST00000451053 CTRB1P17538 263 aa10.14□□□□□ -0.79
VPS33A-202ENST00000451053 EWSR1Q01844 656 aaKnown RBP eCLIP10.14□□□□□ -0.79
VPS33A-202ENST00000451053 KIAA0141Q14154 515 aaPredicted RBP10.14□□□□□ -0.79
VPS33A-202ENST00000451053 NSUN5P1Q3KNT7 163 aa10.14□□□□□ -0.79
VPS33A-202ENST00000451053 C2orf83Q53S99 150 aa10.14□□□□□ -0.79
VPS33A-202ENST00000451053 CTRB2Q6GPI1 263 aa10.14□□□□□ -0.79
VPS33A-202ENST00000451053 TMEM14EPQ6UXP3 125 aa10.14□□□□□ -0.79
VPS33A-202ENST00000451053 C18orf65Q6ZTR6 163 aa10.14□□□□□ -0.79
VPS33A-202ENST00000451053 C9orf62Q8N4C0 152 aa10.14□□□□□ -0.79
VPS33A-202ENST00000451053 KCNRGQ8N5I3 272 aa10.14□□□□□ -0.79
VPS33A-202ENST00000451053 TMEM252Q8N6L7 170 aa10.14□□□□□ -0.79
VPS33A-202ENST00000451053 PAIP2BQ9ULR5 123 aaKnown RBP10.14□□□□□ -0.79
VPS33A-202ENST00000451053 HSPB11Q9Y547 144 aa10.14□□□□□ -0.79
VPS33A-202ENST00000451053 TSSC4Q9Y5U2 329 aaPredicted RBP10.14□□□□□ -0.79
VPS33A-202ENST00000451053 KANTRA0A1W2PQU2 76 aa10.13□□□□□ -0.79
VPS33A-202ENST00000451053 IGSF23A1L1A6 192 aa10.13□□□□□ -0.79
VPS33A-202ENST00000451053 C15orf62A8K5M9 175 aa10.13□□□□□ -0.79
VPS33A-202ENST00000451053 CORTO00230 105 aa10.13□□□□□ -0.79
VPS33A-202ENST00000451053 TAAR5O14804 337 aa10.13□□□□□ -0.79
VPS33A-202ENST00000451053 TRGV3P03979 118 aa10.13□□□□□ -0.79
VPS33A-202ENST00000451053 S100A11P31949 105 aa10.13□□□□□ -0.79
VPS33A-202ENST00000451053 NKX2-5P52952 324 aaPredicted RBP10.13□□□□□ -0.79
VPS33A-202ENST00000451053 AP2S1P53680 142 aaPredicted RBP10.13□□□□□ -0.79
VPS33A-202ENST00000451053 TPPP2P59282 170 aa10.13□□□□□ -0.79
VPS33A-202ENST00000451053 BSXQ3C1V8 233 aa10.13□□□□□ -0.79
VPS33A-202ENST00000451053 NDUFA11Q86Y39 141 aa10.13□□□□□ -0.79
VPS33A-202ENST00000451053 ZNF491Q8N8L2 437 aa10.13□□□□□ -0.79
VPS33A-202ENST00000451053 PINX1Q96BK5 328 aaKnown RBP10.13□□□□□ -0.79
VPS33A-202ENST00000451053 OR4C12Q96R67 309 aa10.13□□□□□ -0.79
VPS33A-202ENST00000451053 SLA2Q9H6Q3 261 aa10.13□□□□□ -0.79
VPS33A-202ENST00000451053 DMRT1Q9Y5R6 373 aa10.13□□□□□ -0.79
VPS33A-202ENST00000451053 TRBV9A0A0B4J1U6 114 aa10.12□□□□□ -0.79
VPS33A-202ENST00000451053 BRI3O95415 125 aa10.12□□□□□ -0.79
VPS33A-202ENST00000451053 IFNA4P05014 189 aa10.12□□□□□ -0.79
VPS33A-202ENST00000451053 METTL15P1P0C7V9 234 aa10.12□□□□□ -0.79
VPS33A-202ENST00000451053 RNASE2P10153 161 aaKnown RBP10.12□□□□□ -0.79
VPS33A-202ENST00000451053 CXCL2P19875 107 aa10.12□□□□□ -0.79
VPS33A-202ENST00000451053 MFAP2P55001 183 aa10.12□□□□□ -0.79
VPS33A-202ENST00000451053 LGALSLQ3ZCW2 172 aaPredicted RBP10.12□□□□□ -0.79
VPS33A-202ENST00000451053 TMUB2Q71RG4 321 aa10.12□□□□□ -0.79
VPS33A-202ENST00000451053 OR10P1Q8NGE3 313 aa10.12□□□□□ -0.79
VPS33A-202ENST00000451053 OR1S2Q8NGQ3 325 aa10.12□□□□□ -0.79
VPS33A-202ENST00000451053 OR1P1Q8NH06 330 aa10.12□□□□□ -0.79
VPS33A-202ENST00000451053 FANCD2OSQ96PS1 177 aa10.12□□□□□ -0.79
VPS33A-202ENST00000451053 ARPC5LQ9BPX5 153 aa10.12□□□□□ -0.79
VPS33A-202ENST00000451053 ARL6Q9H0F7 186 aa10.12□□□□□ -0.79
VPS33A-202ENST00000451053 GNB4Q9HAV0 340 aa10.12□□□□□ -0.79
VPS33A-202ENST00000451053 F11RQ9Y624 299 aaKnown RBP10.12□□□□□ -0.79
VPS33A-202ENST00000451053 IGLV11-55A0A075B6I3 123 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms