RNA–Protein interactions for RNA: ENST00000448878.6

CHCHD3-203, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 5 BASIC

Gene CHCHD3, Length 1,038 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-203ENST00000448878 STXBP6Q8NFX7 210 aa13.05□□□□□ -0.32
CHCHD3-203ENST00000448878 IFT46Q9NQC8 304 aa13.05□□□□□ -0.32
CHCHD3-203ENST00000448878 DBX1A6NMT0 343 aa13.04□□□□□ -0.32
CHCHD3-203ENST00000448878 KNCNA6PVL3 124 aa13.04□□□□□ -0.32
CHCHD3-203ENST00000448878 RTL8CO15255 209 aa13.04□□□□□ -0.32
CHCHD3-203ENST00000448878 MXD1Q05195 221 aa13.04□□□□□ -0.32
CHCHD3-203ENST00000448878 TMEM41BQ5BJD5 291 aa13.04□□□□□ -0.32
CHCHD3-203ENST00000448878 UBE2UQ5VVX9 321 aa13.04□□□□□ -0.32
CHCHD3-203ENST00000448878 MORN3Q6PF18 240 aaPredicted RBP13.04□□□□□ -0.32
CHCHD3-203ENST00000448878 CMTM1Q8IZ96 169 aa13.04□□□□□ -0.32
CHCHD3-203ENST00000448878 OR5H6Q8NGV6 325 aa13.04□□□□□ -0.32
CHCHD3-203ENST00000448878 TSC22D3Q99576 134 aa13.04□□□□□ -0.32
CHCHD3-203ENST00000448878 ZNF2Q9BSG1 426 aaPredicted RBP13.04□□□□□ -0.32
CHCHD3-203ENST00000448878 NDUFAF3Q9BU61 184 aa13.04□□□□□ -0.32
CHCHD3-203ENST00000448878 TMEM231Q9H6L2 316 aa13.04□□□□□ -0.32
CHCHD3-203ENST00000448878 VSIRQ9H7M9 311 aa13.04□□□□□ -0.32
CHCHD3-203ENST00000448878 DIABLOQ9NR28 239 aa13.04□□□□□ -0.32
CHCHD3-203ENST00000448878 BLOC1S6Q9UL45 172 aa13.04□□□□□ -0.32
CHCHD3-203ENST00000448878 TBC1D24Q9ULP9 559 aa13.04□□□□□ -0.32
CHCHD3-203ENST00000448878 PUS1Q9Y606 427 aaKnown RBP eCLIP13.04□□□□□ -0.32
CHCHD3-203ENST00000448878 SPP1P10451 314 aa13.03□□□□□ -0.32
CHCHD3-203ENST00000448878 CBX5P45973 191 aa13.03□□□□□ -0.32
CHCHD3-203ENST00000448878 IDNKQ5T6J7 187 aa13.03□□□□□ -0.32
CHCHD3-203ENST00000448878 TRPT1Q86TN4 253 aaKnown RBP13.03□□□□□ -0.32
CHCHD3-203ENST00000448878 OR4A16Q8NH70 328 aa13.03□□□□□ -0.32
CHCHD3-203ENST00000448878 CNBD2Q96M20 576 aa13.03□□□□□ -0.32
CHCHD3-203ENST00000448878 SSR3Q9UNL2 185 aa13.03□□□□□ -0.32
CHCHD3-203ENST00000448878 GIG44P09565 113 aaPredicted RBP13.02□□□□□ -0.33
CHCHD3-203ENST00000448878 ZNF688P0C7X2 276 aa13.02□□□□□ -0.33
CHCHD3-203ENST00000448878 C4BPBP20851 252 aa13.02□□□□□ -0.33
CHCHD3-203ENST00000448878 NPPCP23582 126 aa13.02□□□□□ -0.33
CHCHD3-203ENST00000448878 PSMB9P28065 219 aa13.02□□□□□ -0.33
CHCHD3-203ENST00000448878 NPBWR1P48145 328 aa13.02□□□□□ -0.33
CHCHD3-203ENST00000448878 RFX2P48378 723 aa13.02□□□□□ -0.33
CHCHD3-203ENST00000448878 ERHP84090 104 aaKnown RBP13.02□□□□□ -0.33
CHCHD3-203ENST00000448878 ACTL10Q5JWF8 245 aa13.02□□□□□ -0.33
CHCHD3-203ENST00000448878 ZNF600Q6ZNG1 722 aa13.02□□□□□ -0.33
CHCHD3-203ENST00000448878 AUNIPQ9H7T9 357 aa13.02□□□□□ -0.33
CHCHD3-203ENST00000448878 TMEM14BQ9NUH8 114 aa13.02□□□□□ -0.33
CHCHD3-203ENST00000448878 CELA1Q9UNI1 258 aa13.02□□□□□ -0.33
CHCHD3-203ENST00000448878 X6R8D5 127 aa13.02□□□□□ -0.33
CHCHD3-203ENST00000448878 IGLV2-18A0A075B6J9 118 aa13.01□□□□□ -0.33
CHCHD3-203ENST00000448878 TRAV2A0A0B4J234 112 aa13.01□□□□□ -0.33
CHCHD3-203ENST00000448878 A0A1W2PS18 150 aa13.01□□□□□ -0.33
CHCHD3-203ENST00000448878 ZNF705EA8MWA4 302 aaPredicted RBP13.01□□□□□ -0.33
CHCHD3-203ENST00000448878 IFNA10P01566 189 aa13.01□□□□□ -0.33
CHCHD3-203ENST00000448878 PMP2P02689 132 aa13.01□□□□□ -0.33
CHCHD3-203ENST00000448878 NPY1RP25929 384 aa13.01□□□□□ -0.33
CHCHD3-203ENST00000448878 FGF9P31371 208 aaPredicted RBP13.01□□□□□ -0.33
CHCHD3-203ENST00000448878 SDC2P34741 201 aa13.01□□□□□ -0.33
CHCHD3-203ENST00000448878 C12orf74Q32Q52 190 aa13.01□□□□□ -0.33
CHCHD3-203ENST00000448878 H2BFWTQ7Z2G1 175 aa13.01□□□□□ -0.33
CHCHD3-203ENST00000448878 UBE2DNLQ8IWF7 75 aa13.01□□□□□ -0.33
CHCHD3-203ENST00000448878 NRG4Q8WWG1 115 aa13.01□□□□□ -0.33
CHCHD3-203ENST00000448878 SLC25A38Q96DW6 304 aa13.01□□□□□ -0.33
CHCHD3-203ENST00000448878 IFNA21P01568 189 aa13□□□□□ -0.33
CHCHD3-203ENST00000448878 IFNA17P01571 189 aa13□□□□□ -0.33
CHCHD3-203ENST00000448878 AMBPP02760 352 aa13□□□□□ -0.33
CHCHD3-203ENST00000448878 CLEC2LP0C7M8 214 aa13□□□□□ -0.33
CHCHD3-203ENST00000448878 PHLDA2Q53GA4 152 aa13□□□□□ -0.33
CHCHD3-203ENST00000448878 DNAH6Q9C0G6 4158 aa13□□□□□ -0.33
CHCHD3-203ENST00000448878 MUC4Q99102 2169 aa12.99□□□□□ -0.33
CHCHD3-203ENST00000448878 K7EQG2 157 aa12.99□□□□□ -0.33
CHCHD3-203ENST00000448878 GPR31O00270 319 aa12.99□□□□□ -0.33
CHCHD3-203ENST00000448878 SPINK9Q5DT21 86 aa12.99□□□□□ -0.33
CHCHD3-203ENST00000448878 DHRS11Q6UWP2 260 aa12.99□□□□□ -0.33
CHCHD3-203ENST00000448878 CADM3Q8N126 398 aa12.99□□□□□ -0.33
CHCHD3-203ENST00000448878 SCRT1Q9BWW7 348 aa12.99□□□□□ -0.33
CHCHD3-203ENST00000448878 KRTAP4-5Q9BYR2 181 aa12.99□□□□□ -0.33
CHCHD3-203ENST00000448878 ZFAND3Q9H8U3 227 aa12.99□□□□□ -0.33
CHCHD3-203ENST00000448878 A0A0A6YYH2 397 aa12.98□□□□□ -0.33
CHCHD3-203ENST00000448878 A6NJ64 397 aa12.98□□□□□ -0.33
CHCHD3-203ENST00000448878 ANKRD65E5RJM6 399 aa12.98□□□□□ -0.33
CHCHD3-203ENST00000448878 TMEM50AO95807 157 aa12.98□□□□□ -0.33
CHCHD3-203ENST00000448878 S100GP29377 79 aa12.98□□□□□ -0.33
CHCHD3-203ENST00000448878 SNCAP37840 140 aa12.98□□□□□ -0.33
CHCHD3-203ENST00000448878 PRCDQ00LT1 54 aa12.98□□□□□ -0.33
CHCHD3-203ENST00000448878 LGALS9BQ3B8N2 356 aa12.98□□□□□ -0.33
CHCHD3-203ENST00000448878 ZNF575Q86XF7 245 aa12.98□□□□□ -0.33
CHCHD3-203ENST00000448878 OR5H2Q8NGV7 314 aa12.98□□□□□ -0.33
CHCHD3-203ENST00000448878 TMEM230Q96A57 120 aa12.98□□□□□ -0.33
CHCHD3-203ENST00000448878 NARS2Q96I59 477 aaKnown RBP12.98□□□□□ -0.33
CHCHD3-203ENST00000448878 METTL26Q96S19 204 aa12.98□□□□□ -0.33
CHCHD3-203ENST00000448878 A0A1B0GU03 582 aa12.97□□□□□ -0.33
CHCHD3-203ENST00000448878 P2RY1P47900 373 aa12.97□□□□□ -0.33
CHCHD3-203ENST00000448878 SCAND1P57086 179 aa12.97□□□□□ -0.33
CHCHD3-203ENST00000448878 HSPE1P61604 102 aaKnown RBP12.97□□□□□ -0.33
CHCHD3-203ENST00000448878 ZNF114Q8NC26 417 aa12.97□□□□□ -0.33
CHCHD3-203ENST00000448878 OR6F1Q8NGZ6 308 aa12.97□□□□□ -0.33
CHCHD3-203ENST00000448878 GRAMD2BQ96HH9 432 aa12.97□□□□□ -0.33
CHCHD3-203ENST00000448878 PLA2G2EQ9NZK7 142 aa12.97□□□□□ -0.33
CHCHD3-203ENST00000448878 AGRNO00468 2067 aa12.97□□□□□ -0.33
CHCHD3-203ENST00000448878 PPP5CP53041 499 aa12.96□□□□□ -0.33
CHCHD3-203ENST00000448878 DHRS2Q13268 280 aa12.96□□□□□ -0.33
CHCHD3-203ENST00000448878 SOHLH1Q5JUK2 328 aa12.96□□□□□ -0.33
CHCHD3-203ENST00000448878 FXYD6Q9H0Q3 95 aa12.96□□□□□ -0.33
CHCHD3-203ENST00000448878 RNF167Q9H6Y7 350 aa12.96□□□□□ -0.33
CHCHD3-203ENST00000448878 XCL2Q9UBD3 114 aa12.96□□□□□ -0.33
CHCHD3-203ENST00000448878 EMP1P54849 157 aa12.95□□□□□ -0.34
CHCHD3-203ENST00000448878 NUTF2P61970 127 aaKnown RBP12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 109.3 ms