RNA–Protein interactions for RNA: ENST00000448183.6

NEDD9-204, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best)

Gene NEDD9, Length 4,934 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-204ENST00000448183 PRR32B1ATL7 298 aa6.53□□□□□ -1.36
NEDD9-204ENST00000448183 TRGV3P03979 118 aa6.53□□□□□ -1.36
NEDD9-204ENST00000448183 LINC00614P0C842 121 aa6.53□□□□□ -1.36
NEDD9-204ENST00000448183 PAQR4Q8N4S7 273 aaPredicted RBP6.53□□□□□ -1.36
NEDD9-204ENST00000448183 TEX29Q8N6K0 151 aa6.53□□□□□ -1.36
NEDD9-204ENST00000448183 FADS6Q8N9I5 356 aa6.53□□□□□ -1.36
NEDD9-204ENST00000448183 WBP1Q96G27 269 aa6.53□□□□□ -1.36
NEDD9-204ENST00000448183 MEGF9Q9H1U4 602 aa6.53□□□□□ -1.36
NEDD9-204ENST00000448183 NEUROG3Q9Y4Z2 214 aa6.53□□□□□ -1.36
NEDD9-204ENST00000448183 PGPEP1LA6NFU8 196 aa6.52□□□□□ -1.37
NEDD9-204ENST00000448183 FOXH1O75593 365 aa6.52□□□□□ -1.37
NEDD9-204ENST00000448183 TEX38Q6PEX7 206 aa6.52□□□□□ -1.37
NEDD9-204ENST00000448183 HIST3H2BBQ8N257 126 aa6.52□□□□□ -1.37
NEDD9-204ENST00000448183 OCC1Q8TAD7 63 aa6.52□□□□□ -1.37
NEDD9-204ENST00000448183 MRPL20Q9BYC9 149 aaKnown RBP6.52□□□□□ -1.37
NEDD9-204ENST00000448183 WDR83OSQ9Y284 106 aa6.52□□□□□ -1.37
NEDD9-204ENST00000448183 RBBP6Q7Z6E9 1792 aaKnown RBP6.52□□□□□ -1.37
NEDD9-204ENST00000448183 UPK2O00526 184 aa6.52□□□□□ -1.37
NEDD9-204ENST00000448183 CELA3AP09093 270 aa6.52□□□□□ -1.37
NEDD9-204ENST00000448183 ZNF124Q15973 351 aa6.52□□□□□ -1.37
NEDD9-204ENST00000448183 SSBP4Q9BWG4 385 aaPredicted RBP6.52□□□□□ -1.37
NEDD9-204ENST00000448183 GNB1LQ9BYB4 327 aa6.52□□□□□ -1.37
NEDD9-204ENST00000448183 NHP2Q9NX24 153 aaKnown RBP6.52□□□□□ -1.37
NEDD9-204ENST00000448183 ELOVL5Q9NYP7 299 aa6.52□□□□□ -1.37
NEDD9-204ENST00000448183 S4R3C0 116 aa6.52□□□□□ -1.37
NEDD9-204ENST00000448183 A0A087WV48 116 aa6.52□□□□□ -1.37
NEDD9-204ENST00000448183 IQCF6A8MYZ5 107 aa6.52□□□□□ -1.37
NEDD9-204ENST00000448183 YPEL1O60688 119 aa6.52□□□□□ -1.37
NEDD9-204ENST00000448183 LYPD3O95274 346 aa6.52□□□□□ -1.37
NEDD9-204ENST00000448183 FAM201AQ5SY85 155 aa6.52□□□□□ -1.37
NEDD9-204ENST00000448183 ATP1A1-AS1Q5TC04 95 aa6.52□□□□□ -1.37
NEDD9-204ENST00000448183 SIGLEC12Q96PQ1 595 aa6.52□□□□□ -1.37
NEDD9-204ENST00000448183 YPEL2Q96QA6 119 aa6.52□□□□□ -1.37
NEDD9-204ENST00000448183 PIMREGQ9BSJ6 248 aa6.52□□□□□ -1.37
NEDD9-204ENST00000448183 LINC00312Q9Y6C7 94 aa6.52□□□□□ -1.37
NEDD9-204ENST00000448183 SPTBN2O15020 2390 aa6.52□□□□□ -1.37
NEDD9-204ENST00000448183 FABP5P3A8MUU1 101 aa6.52□□□□□ -1.37
NEDD9-204ENST00000448183 H3BRM9 83 aa6.52□□□□□ -1.37
NEDD9-204ENST00000448183 HBDP02042 147 aa6.52□□□□□ -1.37
NEDD9-204ENST00000448183 CD55P08174 381 aa6.52□□□□□ -1.37
NEDD9-204ENST00000448183 APOBEC3AP31941 199 aaPredicted RBP6.52□□□□□ -1.37
NEDD9-204ENST00000448183 OR10J3Q5JRS4 329 aa6.52□□□□□ -1.37
NEDD9-204ENST00000448183 GFI1Q99684 422 aa6.52□□□□□ -1.37
NEDD9-204ENST00000448183 C2orf88Q9BSF0 95 aa6.52□□□□□ -1.37
NEDD9-204ENST00000448183 CHODLQ9H9P2 273 aa6.52□□□□□ -1.37
NEDD9-204ENST00000448183 WFDC1Q9HC57 220 aa6.52□□□□□ -1.37
NEDD9-204ENST00000448183 SEMA5BQ9P283 1151 aa6.52□□□□□ -1.37
NEDD9-204ENST00000448183 POLEQ07864 2286 aa6.52□□□□□ -1.37
NEDD9-204ENST00000448183 A0A1W2PRS3 328 aa6.51□□□□□ -1.37
NEDD9-204ENST00000448183 C15orf61A6NNL5 157 aa6.51□□□□□ -1.37
NEDD9-204ENST00000448183 NDUFA3O95167 84 aa6.51□□□□□ -1.37
NEDD9-204ENST00000448183 SAA1P0DJI8 122 aaPredicted RBP6.51□□□□□ -1.37
NEDD9-204ENST00000448183 GAS1P54826 345 aa6.51□□□□□ -1.37
NEDD9-204ENST00000448183 C1QL4Q86Z23 238 aa6.51□□□□□ -1.37
NEDD9-204ENST00000448183 SLX1AQ9BQ83 275 aa6.51□□□□□ -1.37
NEDD9-204ENST00000448183 EPDR1Q9UM22 224 aa6.51□□□□□ -1.37
NEDD9-204ENST00000448183 IGHV2OR16-5A0A0B4J2B6 119 aa6.51□□□□□ -1.37
NEDD9-204ENST00000448183 EFEMP2O95967 443 aa6.51□□□□□ -1.37
NEDD9-204ENST00000448183 IGHV3-23P01764 117 aa6.51□□□□□ -1.37
NEDD9-204ENST00000448183 AMBPP02760 352 aa6.51□□□□□ -1.37
NEDD9-204ENST00000448183 LEPP41159 167 aa6.51□□□□□ -1.37
NEDD9-204ENST00000448183 OR5A1Q8NGJ0 315 aa6.51□□□□□ -1.37
NEDD9-204ENST00000448183 TMEM101Q96IK0 257 aa6.51□□□□□ -1.37
NEDD9-204ENST00000448183 ASCL2Q99929 193 aa6.51□□□□□ -1.37
NEDD9-204ENST00000448183 POLR2AP24928 1970 aaKnown RBP6.51□□□□□ -1.37
NEDD9-204ENST00000448183 IGKV1D-33P01593 117 aa6.51□□□□□ -1.37
NEDD9-204ENST00000448183 IGKV1-33P01594 117 aa6.51□□□□□ -1.37
NEDD9-204ENST00000448183 PPBPP02775 128 aa6.51□□□□□ -1.37
NEDD9-204ENST00000448183 RTN4RL2Q86UN3 420 aa6.51□□□□□ -1.37
NEDD9-204ENST00000448183 OR2K2Q8NGT1 345 aa6.51□□□□□ -1.37
NEDD9-204ENST00000448183 PLXNB2O15031 1838 aa6.51□□□□□ -1.37
NEDD9-204ENST00000448183 IGHV3-66A0A0C4DH42 116 aa6.51□□□□□ -1.37
NEDD9-204ENST00000448183 TNFSF13O75888 250 aa6.51□□□□□ -1.37
NEDD9-204ENST00000448183 GNG5P63218 68 aa6.51□□□□□ -1.37
NEDD9-204ENST00000448183 LDLRAD2Q5SZI1 272 aa6.51□□□□□ -1.37
NEDD9-204ENST00000448183 GLRX5Q86SX6 157 aa6.51□□□□□ -1.37
NEDD9-204ENST00000448183 ORAOV1Q8WV07 137 aa6.51□□□□□ -1.37
NEDD9-204ENST00000448183 ARPC1AQ92747 370 aa6.51□□□□□ -1.37
NEDD9-204ENST00000448183 FNDC4Q9H6D8 234 aaPredicted RBP6.51□□□□□ -1.37
NEDD9-204ENST00000448183 NXT2Q9NPJ8 142 aaKnown RBP6.51□□□□□ -1.37
NEDD9-204ENST00000448183 ANKRD36A6QL64 1941 aa6.5□□□□□ -1.37
NEDD9-204ENST00000448183 RALGAPA1Q6GYQ0 2036 aa6.5□□□□□ -1.37
NEDD9-204ENST00000448183 IGKV1D-8A0A087WSZ0 117 aa6.5□□□□□ -1.37
NEDD9-204ENST00000448183 TRAV8-2A0A0B4J237 113 aa6.5□□□□□ -1.37
NEDD9-204ENST00000448183 A0A0G2JLM5 398 aa6.5□□□□□ -1.37
NEDD9-204ENST00000448183 CXCL1P09341 107 aa6.5□□□□□ -1.37
NEDD9-204ENST00000448183 EFNB3Q15768 340 aa6.5□□□□□ -1.37
NEDD9-204ENST00000448183 LHFPL1Q86WI0 220 aa6.5□□□□□ -1.37
NEDD9-204ENST00000448183 BEND2Q8NDZ0 799 aa6.5□□□□□ -1.37
NEDD9-204ENST00000448183 LYZL4Q96KX0 146 aa6.5□□□□□ -1.37
NEDD9-204ENST00000448183 IMMP1LQ96LU5 166 aa6.5□□□□□ -1.37
NEDD9-204ENST00000448183 SAA2-SAA4A0A096LPE2 208 aa6.5□□□□□ -1.37
NEDD9-204ENST00000448183 TRAV1-1A0A0B4J248 108 aa6.5□□□□□ -1.37
NEDD9-204ENST00000448183 DPM2O94777 84 aa6.5□□□□□ -1.37
NEDD9-204ENST00000448183 TGFAP01135 160 aa6.5□□□□□ -1.37
NEDD9-204ENST00000448183 SAA2P0DJI9 122 aaPredicted RBP6.5□□□□□ -1.37
NEDD9-204ENST00000448183 SEC11AP67812 179 aa6.5□□□□□ -1.37
NEDD9-204ENST00000448183 CD69Q07108 199 aa6.5□□□□□ -1.37
NEDD9-204ENST00000448183 ZNF497Q6ZNH5 498 aa6.5□□□□□ -1.37
NEDD9-204ENST00000448183 PPP1R27Q86WC6 154 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms