RNA–Protein interactions for RNA: ENST00000447873.5

SGCE-207, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-207ENST00000447873 C19orf54Q5BKX5 351 aa15.32■□□□□ 0.04
SGCE-207ENST00000447873 ZNF355PQ9NSJ1 428 aa15.32■□□□□ 0.04
SGCE-207ENST00000447873 PMS2P5A8MQ11 134 aa15.32■□□□□ 0.04
SGCE-207ENST00000447873 TSPAN9O75954 239 aa15.32■□□□□ 0.04
SGCE-207ENST00000447873 PRH1P02810 166 aa15.32■□□□□ 0.04
SGCE-207ENST00000447873 MFAP2P55001 183 aa15.32■□□□□ 0.04
SGCE-207ENST00000447873 C9orf62Q8N4C0 152 aa15.32■□□□□ 0.04
SGCE-207ENST00000447873 TAF15Q92804 592 aaKnown RBP eCLIP15.32■□□□□ 0.04
SGCE-207ENST00000447873 MISP3Q96FF7 219 aa15.32■□□□□ 0.04
SGCE-207ENST00000447873 CORTO00230 105 aa15.31■□□□□ 0.04
SGCE-207ENST00000447873 ARL16Q0P5N6 197 aa15.31■□□□□ 0.04
SGCE-207ENST00000447873 HAPLN4Q86UW8 402 aa15.31■□□□□ 0.04
SGCE-207ENST00000447873 KCNRGQ8N5I3 272 aa15.31■□□□□ 0.04
SGCE-207ENST00000447873 OR1S2Q8NGQ3 325 aa15.31■□□□□ 0.04
SGCE-207ENST00000447873 OR5C1Q8NGR4 320 aa15.31■□□□□ 0.04
SGCE-207ENST00000447873 RNASEH2CQ8TDP1 164 aaKnown RBP15.31■□□□□ 0.04
SGCE-207ENST00000447873 PINX1Q96BK5 328 aaKnown RBP15.31■□□□□ 0.04
SGCE-207ENST00000447873 BSCL2Q96G97 398 aaPredicted RBP15.31■□□□□ 0.04
SGCE-207ENST00000447873 SMIM3Q9BZL3 60 aa15.31■□□□□ 0.04
SGCE-207ENST00000447873 ARL6Q9H0F7 186 aa15.31■□□□□ 0.04
SGCE-207ENST00000447873 DMRT1Q9Y5R6 373 aa15.31■□□□□ 0.04
SGCE-207ENST00000447873 SOX15O60248 233 aa15.3■□□□□ 0.04
SGCE-207ENST00000447873 PPIFP30405 207 aaKnown RBP15.3■□□□□ 0.04
SGCE-207ENST00000447873 S100A11P31949 105 aa15.3■□□□□ 0.04
SGCE-207ENST00000447873 SLC38A11Q08AI6 406 aa15.3■□□□□ 0.04
SGCE-207ENST00000447873 PVRIGQ6DKI7 326 aa15.3■□□□□ 0.04
SGCE-207ENST00000447873 LAMTOR1Q6IAA8 161 aa15.3■□□□□ 0.04
SGCE-207ENST00000447873 TMUB2Q71RG4 321 aa15.3■□□□□ 0.04
SGCE-207ENST00000447873 LILRB2Q8N423 598 aa15.3■□□□□ 0.04
SGCE-207ENST00000447873 THYN1Q9P016 225 aa15.3■□□□□ 0.04
SGCE-207ENST00000447873 IGLV11-55A0A075B6I3 123 aa15.29■□□□□ 0.04
SGCE-207ENST00000447873 OPRK1P41145 380 aa15.29■□□□□ 0.04
SGCE-207ENST00000447873 FANCD2OSQ96PS1 177 aa15.29■□□□□ 0.04
SGCE-207ENST00000447873 SERTAD4Q9NUC0 356 aa15.29■□□□□ 0.04
SGCE-207ENST00000447873 FBXL17Q9UF56 701 aa15.29■□□□□ 0.04
SGCE-207ENST00000447873 HIST1H1BP16401 226 aaKnown RBP15.28■□□□□ 0.04
SGCE-207ENST00000447873 SLC35B1P78383 322 aa15.28■□□□□ 0.04
SGCE-207ENST00000447873 SRSF2Q01130 221 aaKnown RBP15.28■□□□□ 0.04
SGCE-207ENST00000447873 CFHR3Q02985 330 aa15.28■□□□□ 0.04
SGCE-207ENST00000447873 EXOSC2Q13868 293 aaKnown RBP15.28■□□□□ 0.04
SGCE-207ENST00000447873 CLINT1Q14677 625 aa15.28■□□□□ 0.04
SGCE-207ENST00000447873 KANTRA0A1W2PQU2 76 aa15.28■□□□□ 0.04
SGCE-207ENST00000447873 PRSS46E5RG02 174 aa15.28■□□□□ 0.04
SGCE-207ENST00000447873 CD69Q07108 199 aa15.28■□□□□ 0.04
SGCE-207ENST00000447873 ZNF329Q86UD4 541 aa15.28■□□□□ 0.04
SGCE-207ENST00000447873 MS4A10Q96PG2 267 aa15.28■□□□□ 0.04
SGCE-207ENST00000447873 ARPC5LQ9BPX5 153 aa15.28■□□□□ 0.04
SGCE-207ENST00000447873 PSMB11A5LHX3 300 aa15.27■□□□□ 0.03
SGCE-207ENST00000447873 H3BUA1 57 aa15.27■□□□□ 0.03
SGCE-207ENST00000447873 TAAR5O14804 337 aa15.27■□□□□ 0.03
SGCE-207ENST00000447873 OR2J3O76001 311 aa15.27■□□□□ 0.03
SGCE-207ENST00000447873 MT-CO2P00403 227 aa15.27■□□□□ 0.03
SGCE-207ENST00000447873 C4BPBP20851 252 aa15.27■□□□□ 0.03
SGCE-207ENST00000447873 GPX4P36969 197 aaPredicted RBP15.27■□□□□ 0.03
SGCE-207ENST00000447873 ATP6V1FQ16864 119 aa15.27■□□□□ 0.03
SGCE-207ENST00000447873 ETFRF1Q6IPR1 90 aa15.27■□□□□ 0.03
SGCE-207ENST00000447873 CENPVQ7Z7K6 275 aaPredicted RBP15.27■□□□□ 0.03
SGCE-207ENST00000447873 CACNG8Q8WXS5 425 aa15.27■□□□□ 0.03
SGCE-207ENST00000447873 GGACTQ9BVM4 153 aa15.27■□□□□ 0.03
SGCE-207ENST00000447873 C16orf95Q9H693 158 aa15.27■□□□□ 0.03
SGCE-207ENST00000447873 JMJD1CQ15652 2540 aa15.27■□□□□ 0.03
SGCE-207ENST00000447873 RPS10-NUDT3A0A1W2PQS6 291 aa15.26■□□□□ 0.03
SGCE-207ENST00000447873 BCL2L11O43521 198 aa15.26■□□□□ 0.03
SGCE-207ENST00000447873 NDUFA7O95182 113 aa15.26■□□□□ 0.03
SGCE-207ENST00000447873 IGLV1-40P01703 118 aa15.26■□□□□ 0.03
SGCE-207ENST00000447873 DLK1P80370 383 aa15.26■□□□□ 0.03
SGCE-207ENST00000447873 ATP5SQ99766 215 aa15.26■□□□□ 0.03
SGCE-207ENST00000447873 FNDC4Q9H6D8 234 aaPredicted RBP15.26■□□□□ 0.03
SGCE-207ENST00000447873 FBXL7Q9UJT9 491 aa15.26■□□□□ 0.03
SGCE-207ENST00000447873 TRBV9A0A0B4J1U6 114 aa15.25■□□□□ 0.03
SGCE-207ENST00000447873 IGHV3-21A0A0B4J1V1 117 aa15.25■□□□□ 0.03
SGCE-207ENST00000447873 SMCO3A2RU48 225 aa15.25■□□□□ 0.03
SGCE-207ENST00000447873 I3L2K1 104 aa15.25■□□□□ 0.03
SGCE-207ENST00000447873 DFFBO76075 338 aa15.25■□□□□ 0.03
SGCE-207ENST00000447873 BRI3O95415 125 aa15.25■□□□□ 0.03
SGCE-207ENST00000447873 TRGV3P03979 118 aa15.25■□□□□ 0.03
SGCE-207ENST00000447873 PF4V1P10720 104 aa15.25■□□□□ 0.03
SGCE-207ENST00000447873 RHOGP84095 191 aa15.25■□□□□ 0.03
SGCE-207ENST00000447873 MLANAQ16655 118 aa15.25■□□□□ 0.03
SGCE-207ENST00000447873 KLK9Q2XQG4 91 aa15.25■□□□□ 0.03
SGCE-207ENST00000447873 SLC16A13Q7RTY0 426 aa15.25■□□□□ 0.03
SGCE-207ENST00000447873 NECAP1Q8NC96 275 aa15.25■□□□□ 0.03
SGCE-207ENST00000447873 TMEM147Q9BVK8 224 aa15.25■□□□□ 0.03
SGCE-207ENST00000447873 SLA2Q9H6Q3 261 aa15.25■□□□□ 0.03
SGCE-207ENST00000447873 WFDC1Q9HC57 220 aa15.25■□□□□ 0.03
SGCE-207ENST00000447873 UQCC1Q9NVA1 299 aa15.25■□□□□ 0.03
SGCE-207ENST00000447873 KLK9Q9UKQ9 250 aa15.25■□□□□ 0.03
SGCE-207ENST00000447873 BOLA1Q9Y3E2 137 aa15.25■□□□□ 0.03
SGCE-207ENST00000447873 K7EIM0 57 aa15.24■□□□□ 0.03
SGCE-207ENST00000447873 NDUFB8O95169 186 aa15.24■□□□□ 0.03
SGCE-207ENST00000447873 IGHV3-48P01763 117 aa15.24■□□□□ 0.03
SGCE-207ENST00000447873 IGHG4P01861 327 aa15.24■□□□□ 0.03
SGCE-207ENST00000447873 TPPP2P59282 170 aa15.24■□□□□ 0.03
SGCE-207ENST00000447873 DEFA5Q01523 94 aa15.24■□□□□ 0.03
SGCE-207ENST00000447873 OPCMLQ14982 345 aa15.24■□□□□ 0.03
SGCE-207ENST00000447873 TEX38Q6PEX7 206 aa15.24■□□□□ 0.03
SGCE-207ENST00000447873 OR4F5Q8NH21 305 aa15.24■□□□□ 0.03
SGCE-207ENST00000447873 LINC01006Q8NI28 216 aa15.24■□□□□ 0.03
SGCE-207ENST00000447873 SLC35E1Q96K37 410 aa15.24■□□□□ 0.03
SGCE-207ENST00000447873 C2CD3Q4AC94 2353 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 130.3 ms