RNA–Protein interactions for RNA: ENST00000447654.5

HMGA1-205, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HMGA1, Length 2,159 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-205ENST00000447654 NPIPA3F8WFD2 350 aa15.83■□□□□ 0.12
HMGA1-205ENST00000447654 G6PCP35575 357 aa15.83■□□□□ 0.12
HMGA1-205ENST00000447654 LINC01545Q5VT33 79 aa15.83■□□□□ 0.12
HMGA1-205ENST00000447654 IL1F10Q8WWZ1 152 aa15.83■□□□□ 0.12
HMGA1-205ENST00000447654 IGF2BP2-AS1Q96M15 143 aa15.83■□□□□ 0.12
HMGA1-205ENST00000447654 PRRC2CQ9Y520 2896 aaKnown RBP15.82■□□□□ 0.12
HMGA1-205ENST00000447654 SERTM2A0A1B0GWG4 89 aa15.82■□□□□ 0.12
HMGA1-205ENST00000447654 ANKRD30BLA7E2S9 258 aa15.82■□□□□ 0.12
HMGA1-205ENST00000447654 APOA2P02652 100 aa15.82■□□□□ 0.12
HMGA1-205ENST00000447654 MFAP2P55001 183 aa15.82■□□□□ 0.12
HMGA1-205ENST00000447654 EFNB3Q15768 340 aa15.82■□□□□ 0.12
HMGA1-205ENST00000447654 DEPPQ9NTK1 212 aa15.82■□□□□ 0.12
HMGA1-205ENST00000447654 LOXL2Q9Y4K0 774 aa15.82■□□□□ 0.12
HMGA1-205ENST00000447654 HSPB6O14558 160 aa15.82■□□□□ 0.12
HMGA1-205ENST00000447654 FABP2P12104 132 aa15.82■□□□□ 0.12
HMGA1-205ENST00000447654 MIC13Q5XKP0 118 aa15.82■□□□□ 0.12
HMGA1-205ENST00000447654 H2BFWTQ7Z2G1 175 aa15.82■□□□□ 0.12
HMGA1-205ENST00000447654 SERTAD4Q9NUC0 356 aa15.82■□□□□ 0.12
HMGA1-205ENST00000447654 ZNF257Q9Y2Q1 563 aa15.82■□□□□ 0.12
HMGA1-205ENST00000447654 TRAV24A0A0B4J272 114 aa15.81■□□□□ 0.12
HMGA1-205ENST00000447654 ZNF207O43670 478 aaKnown RBP15.81■□□□□ 0.12
HMGA1-205ENST00000447654 PCBD1P61457 104 aa15.81■□□□□ 0.12
HMGA1-205ENST00000447654 CEACAM21Q3KPI0 293 aa15.81■□□□□ 0.12
HMGA1-205ENST00000447654 STXBP6Q8NFX7 210 aa15.81■□□□□ 0.12
HMGA1-205ENST00000447654 OR4A16Q8NH70 328 aa15.81■□□□□ 0.12
HMGA1-205ENST00000447654 PRDM14Q9GZV8 571 aa15.81■□□□□ 0.12
HMGA1-205ENST00000447654 LSM4Q9Y4Z0 139 aaKnown RBP15.81■□□□□ 0.12
HMGA1-205ENST00000447654 A0A0J9YW62 118 aa15.8■□□□□ 0.12
HMGA1-205ENST00000447654 FAM90A9PA6NNJ1 464 aa15.8■□□□□ 0.12
HMGA1-205ENST00000447654 NEURL1O76050 574 aa15.8■□□□□ 0.12
HMGA1-205ENST00000447654 P04436 131 aa15.8■□□□□ 0.12
HMGA1-205ENST00000447654 KIR3DS1Q14943 382 aa15.8■□□□□ 0.12
HMGA1-205ENST00000447654 TPRX1Q8N7U7 411 aa15.8■□□□□ 0.12
HMGA1-205ENST00000447654 OR9G4Q8NGQ1 327 aa15.8■□□□□ 0.12
HMGA1-205ENST00000447654 TAAR6Q96RI8 345 aa15.8■□□□□ 0.12
HMGA1-205ENST00000447654 C1QTNF5Q9BXJ0 243 aa15.8■□□□□ 0.12
HMGA1-205ENST00000447654 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP15.8■□□□□ 0.12
HMGA1-205ENST00000447654 TEX48A0A1B0GUV7 120 aa15.8■□□□□ 0.12
HMGA1-205ENST00000447654 RFPL3SP0C7P2 107 aa15.8■□□□□ 0.12
HMGA1-205ENST00000447654 DSCR4P56555 118 aaPredicted RBP15.8■□□□□ 0.12
HMGA1-205ENST00000447654 EIF4EBP1Q13541 118 aaPredicted RBP15.8■□□□□ 0.12
HMGA1-205ENST00000447654 GDF5OSQ5U4N7 250 aa15.8■□□□□ 0.12
HMGA1-205ENST00000447654 HS3ST6Q96QI5 342 aa15.8■□□□□ 0.12
HMGA1-205ENST00000447654 SRXN1Q9BYN0 137 aa15.8■□□□□ 0.12
HMGA1-205ENST00000447654 GTF3C1Q12789 2109 aa15.8■□□□□ 0.12
HMGA1-205ENST00000447654 MGST1P10620 155 aaKnown RBP15.79■□□□□ 0.12
HMGA1-205ENST00000447654 PRSS12P56730 875 aa15.79■□□□□ 0.12
HMGA1-205ENST00000447654 WIPI1Q5MNZ9 446 aaPredicted RBP15.79■□□□□ 0.12
HMGA1-205ENST00000447654 NUP35Q8NFH5 326 aa15.79■□□□□ 0.12
HMGA1-205ENST00000447654 OR4X2Q8NGF9 303 aa15.79■□□□□ 0.12
HMGA1-205ENST00000447654 ZNF837Q96EG3 531 aaPredicted RBP15.79■□□□□ 0.12
HMGA1-205ENST00000447654 POM121L2Q96KW2 1035 aa15.79■□□□□ 0.12
HMGA1-205ENST00000447654 DLL3Q9NYJ7 618 aa15.79■□□□□ 0.12
HMGA1-205ENST00000447654 THYN1Q9P016 225 aa15.79■□□□□ 0.12
HMGA1-205ENST00000447654 SOX21Q9Y651 276 aaPredicted RBP15.79■□□□□ 0.12
HMGA1-205ENST00000447654 CACNA1HO95180 2353 aa15.79■□□□□ 0.12
HMGA1-205ENST00000447654 A0A1B0GXF2 115 aa15.79■□□□□ 0.12
HMGA1-205ENST00000447654 PRSS46E5RG02 174 aa15.79■□□□□ 0.12
HMGA1-205ENST00000447654 ZNF32P17041 273 aa15.79■□□□□ 0.12
HMGA1-205ENST00000447654 NTF4P34130 210 aa15.79■□□□□ 0.12
HMGA1-205ENST00000447654 B3GALT5-AS1P59052 145 aa15.79■□□□□ 0.12
HMGA1-205ENST00000447654 RPL24P83731 157 aaKnown RBP15.79■□□□□ 0.12
HMGA1-205ENST00000447654 DMXL1Q9Y485 3027 aa15.78■□□□□ 0.12
HMGA1-205ENST00000447654 KIAA1549Q9HCM3 1950 aa15.78■□□□□ 0.12
HMGA1-205ENST00000447654 CCDC144NLQ6NUI1 221 aa15.78■□□□□ 0.12
HMGA1-205ENST00000447654 YRDCQ86U90 279 aaKnown RBP15.78■□□□□ 0.12
HMGA1-205ENST00000447654 OR2Z1Q8NG97 314 aa15.78■□□□□ 0.12
HMGA1-205ENST00000447654 OR2H1Q9GZK4 316 aa15.78■□□□□ 0.12
HMGA1-205ENST00000447654 PRR33A8MZF0 331 aa15.77■□□□□ 0.12
HMGA1-205ENST00000447654 RPS16P62249 146 aaKnown RBP15.77■□□□□ 0.12
HMGA1-205ENST00000447654 ZC2HC1AQ96GY0 325 aa15.77■□□□□ 0.12
HMGA1-205ENST00000447654 SPRY4Q9C004 299 aa15.77■□□□□ 0.12
HMGA1-205ENST00000447654 MS4A5Q9H3V2 200 aa15.77■□□□□ 0.12
HMGA1-205ENST00000447654 LAMA5O15230 3695 aa15.77■□□□□ 0.12
HMGA1-205ENST00000447654 A0A1W2PRE2 83 aa15.77■□□□□ 0.11
HMGA1-205ENST00000447654 FGF6P10767 208 aa15.77■□□□□ 0.11
HMGA1-205ENST00000447654 TIMM23BQ5SRD1 257 aa15.77■□□□□ 0.11
HMGA1-205ENST00000447654 C6orf15Q6UXA7 325 aaPredicted RBP15.77■□□□□ 0.11
HMGA1-205ENST00000447654 COLCA1Q6ZS62 124 aa15.77■□□□□ 0.11
HMGA1-205ENST00000447654 OR52E5Q8NH55 327 aa15.77■□□□□ 0.11
HMGA1-205ENST00000447654 LRRC29Q8WV35 223 aa15.77■□□□□ 0.11
HMGA1-205ENST00000447654 PERPQ96FX8 193 aa15.77■□□□□ 0.11
HMGA1-205ENST00000447654 LINC00470Q9BZP3 86 aa15.77■□□□□ 0.11
HMGA1-205ENST00000447654 SIGLEC8Q9NYZ4 499 aa15.77■□□□□ 0.11
HMGA1-205ENST00000447654 IDI2-AS1Q9NZ38 188 aa15.77■□□□□ 0.11
HMGA1-205ENST00000447654 TSSC4Q9Y5U2 329 aaPredicted RBP15.77■□□□□ 0.11
HMGA1-205ENST00000447654 PINLYPA6NC86 204 aa15.76■□□□□ 0.11
HMGA1-205ENST00000447654 RBMXL2O75526 392 aaKnown RBP15.76■□□□□ 0.11
HMGA1-205ENST00000447654 FABP6P51161 128 aa15.76■□□□□ 0.11
HMGA1-205ENST00000447654 ZNF816Q0VGE8 651 aaPredicted RBP15.76■□□□□ 0.11
HMGA1-205ENST00000447654 ZNF497Q6ZNH5 498 aa15.76■□□□□ 0.11
HMGA1-205ENST00000447654 MBNL3Q9NUK0 354 aaKnown RBP15.76■□□□□ 0.11
HMGA1-205ENST00000447654 DUSP13Q9UII6 198 aa15.76■□□□□ 0.11
HMGA1-205ENST00000447654 MED13Q9UHV7 2174 aa15.76■□□□□ 0.11
HMGA1-205ENST00000447654 K7EQM0 130 aa15.75■□□□□ 0.11
HMGA1-205ENST00000447654 CDX4O14627 284 aaPredicted RBP15.75■□□□□ 0.11
HMGA1-205ENST00000447654 CD59P13987 128 aa15.75■□□□□ 0.11
HMGA1-205ENST00000447654 STPG3Q8N7X2 389 aa15.75■□□□□ 0.11
HMGA1-205ENST00000447654 TEX45Q8NA69 505 aa15.75■□□□□ 0.11
HMGA1-205ENST00000447654 FGF23Q9GZV9 251 aaPredicted RBP15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms