RNA–Protein interactions for RNA: ENST00000446852.5

SMC6-206, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 1 (best)

Gene SMC6, Length 2,460 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-206ENST00000446852 APELAP0DMC3 54 aa13.98□□□□□ -0.17
SMC6-206ENST00000446852 RPL27AP46776 148 aaKnown RBP13.98□□□□□ -0.17
SMC6-206ENST00000446852 COMPP49747 757 aaPredicted RBP13.98□□□□□ -0.17
SMC6-206ENST00000446852 UBE2G2P60604 165 aa13.98□□□□□ -0.17
SMC6-206ENST00000446852 SSBP2P81877 361 aaPredicted RBP13.98□□□□□ -0.17
SMC6-206ENST00000446852 C19orf35Q6ZS72 473 aa13.98□□□□□ -0.17
SMC6-206ENST00000446852 RNASEH2CQ8TDP1 164 aaKnown RBP13.98□□□□□ -0.17
SMC6-206ENST00000446852 CFHR4Q92496 578 aa13.98□□□□□ -0.17
SMC6-206ENST00000446852 ACY3Q96HD9 319 aa13.98□□□□□ -0.17
SMC6-206ENST00000446852 SDF2L1Q9HCN8 221 aa13.98□□□□□ -0.17
SMC6-206ENST00000446852 A0A087WWC5 75 aa13.97□□□□□ -0.17
SMC6-206ENST00000446852 C11orf94C9JXX5 98 aa13.97□□□□□ -0.17
SMC6-206ENST00000446852 OR2C1O95371 312 aa13.97□□□□□ -0.17
SMC6-206ENST00000446852 IGHV3-48P01763 117 aa13.97□□□□□ -0.17
SMC6-206ENST00000446852 AREGP15514 252 aa13.97□□□□□ -0.17
SMC6-206ENST00000446852 RHOBP62745 196 aa13.97□□□□□ -0.17
SMC6-206ENST00000446852 GNB1P62873 340 aa13.97□□□□□ -0.17
SMC6-206ENST00000446852 VMO1Q7Z5L0 202 aa13.97□□□□□ -0.17
SMC6-206ENST00000446852 FAM24BQ8N5W8 94 aa13.97□□□□□ -0.17
SMC6-206ENST00000446852 RPUSD4Q96CM3 377 aaKnown RBP13.97□□□□□ -0.17
SMC6-206ENST00000446852 YPEL4Q96NS1 127 aa13.97□□□□□ -0.17
SMC6-206ENST00000446852 SMIM7Q9BQ49 75 aa13.97□□□□□ -0.17
SMC6-206ENST00000446852 OVOL3O00110 214 aa13.97□□□□□ -0.17
SMC6-206ENST00000446852 ACTL6BO94805 426 aa13.97□□□□□ -0.17
SMC6-206ENST00000446852 CXorf1O96002 111 aa13.97□□□□□ -0.17
SMC6-206ENST00000446852 ZNF674Q2M3X9 581 aa13.97□□□□□ -0.17
SMC6-206ENST00000446852 SLC35E1Q96K37 410 aa13.97□□□□□ -0.17
SMC6-206ENST00000446852 MRPL36Q9P0J6 103 aaKnown RBP13.97□□□□□ -0.17
SMC6-206ENST00000446852 ATP5G3P48201 142 aa13.96□□□□□ -0.17
SMC6-206ENST00000446852 SUB1P53999 127 aaKnown RBP eCLIP13.96□□□□□ -0.17
SMC6-206ENST00000446852 MFAP2P55001 183 aa13.96□□□□□ -0.17
SMC6-206ENST00000446852 LCN2P80188 198 aa13.96□□□□□ -0.17
SMC6-206ENST00000446852 PAX2Q02962 417 aa13.96□□□□□ -0.17
SMC6-206ENST00000446852 C1orf122Q6ZSJ8 110 aa13.96□□□□□ -0.17
SMC6-206ENST00000446852 PARLQ9H300 379 aa13.96□□□□□ -0.17
SMC6-206ENST00000446852 MLXQ9UH92 298 aa13.96□□□□□ -0.17
SMC6-206ENST00000446852 FCN1O00602 326 aa13.96□□□□□ -0.18
SMC6-206ENST00000446852 MT-ND4LP03901 98 aa13.96□□□□□ -0.18
SMC6-206ENST00000446852 NPPCP23582 126 aa13.96□□□□□ -0.18
SMC6-206ENST00000446852 MAS1LP35410 378 aa13.96□□□□□ -0.18
SMC6-206ENST00000446852 PNRC1Q12796 327 aaPredicted RBP13.96□□□□□ -0.18
SMC6-206ENST00000446852 FBLN7Q53RD9 439 aa13.96□□□□□ -0.18
SMC6-206ENST00000446852 KIR3DL3Q8N743 410 aa13.96□□□□□ -0.18
SMC6-206ENST00000446852 BPESC1Q9GZL8 116 aa13.96□□□□□ -0.18
SMC6-206ENST00000446852 CRYBG3Q68DQ2 2970 aa13.95□□□□□ -0.18
SMC6-206ENST00000446852 TEX22C9J3V5 150 aa13.95□□□□□ -0.18
SMC6-206ENST00000446852 NDUFS6O75380 124 aaKnown RBP13.95□□□□□ -0.18
SMC6-206ENST00000446852 FOXH1O75593 365 aa13.95□□□□□ -0.18
SMC6-206ENST00000446852 RNF224P0DH78 156 aa13.95□□□□□ -0.18
SMC6-206ENST00000446852 CD24P25063 80 aa13.95□□□□□ -0.18
SMC6-206ENST00000446852 CEACAM3P40198 252 aa13.95□□□□□ -0.18
SMC6-206ENST00000446852 HABP2Q14520 560 aaPredicted RBP13.95□□□□□ -0.18
SMC6-206ENST00000446852 FAM78BQ5VT40 261 aa13.95□□□□□ -0.18
SMC6-206ENST00000446852 MIR17HGQ75NE6 70 aa13.95□□□□□ -0.18
SMC6-206ENST00000446852 OR51G1Q8NGK1 321 aa13.95□□□□□ -0.18
SMC6-206ENST00000446852 RNF5Q99942 180 aa13.95□□□□□ -0.18
SMC6-206ENST00000446852 ABCA2Q9BZC7 2435 aa13.95□□□□□ -0.18
SMC6-206ENST00000446852 KIAA0141Q14154 515 aaPredicted RBP13.95□□□□□ -0.18
SMC6-206ENST00000446852 CST9LP1Q5W188 147 aa13.95□□□□□ -0.18
SMC6-206ENST00000446852 RUSC1-AS1Q66K80 236 aa13.95□□□□□ -0.18
SMC6-206ENST00000446852 PVRIGQ6DKI7 326 aa13.95□□□□□ -0.18
SMC6-206ENST00000446852 CYP2G1PQ6ZSU1 146 aa13.95□□□□□ -0.18
SMC6-206ENST00000446852 ZNF114Q8NC26 417 aa13.95□□□□□ -0.18
SMC6-206ENST00000446852 B4DEV8 164 aa13.94□□□□□ -0.18
SMC6-206ENST00000446852 FOLR2P14207 255 aa13.94□□□□□ -0.18
SMC6-206ENST00000446852 HOXB4P17483 251 aaPredicted RBP13.94□□□□□ -0.18
SMC6-206ENST00000446852 GCHFRP30047 84 aa13.94□□□□□ -0.18
SMC6-206ENST00000446852 FLI1Q01543 452 aaPredicted RBP13.94□□□□□ -0.18
SMC6-206ENST00000446852 NPIPB3Q92617 1050 aa13.94□□□□□ -0.18
SMC6-206ENST00000446852 NAT8Q9UHE5 227 aa13.94□□□□□ -0.18
SMC6-206ENST00000446852 IGHV4-39P01824 125 aa13.93□□□□□ -0.18
SMC6-206ENST00000446852 LMO4P61968 165 aa13.93□□□□□ -0.18
SMC6-206ENST00000446852 MMDQ15546 238 aa13.93□□□□□ -0.18
SMC6-206ENST00000446852 DYNAPQ8N1N2 210 aa13.93□□□□□ -0.18
SMC6-206ENST00000446852 SIRPDQ9H106 197 aa13.93□□□□□ -0.18
SMC6-206ENST00000446852 FUT9Q9Y231 359 aa13.93□□□□□ -0.18
SMC6-206ENST00000446852 IGKV1D-37A0A075B6S9 117 aa13.93□□□□□ -0.18
SMC6-206ENST00000446852 LGALS4P56470 323 aa13.93□□□□□ -0.18
SMC6-206ENST00000446852 SSX2Q16385 188 aa13.93□□□□□ -0.18
SMC6-206ENST00000446852 ZNF343Q6P1L6 599 aa13.93□□□□□ -0.18
SMC6-206ENST00000446852 SRSF12Q8WXF0 261 aaKnown RBP13.93□□□□□ -0.18
SMC6-206ENST00000446852 YTHDF2Q9Y5A9 579 aaKnown RBP13.93□□□□□ -0.18
SMC6-206ENST00000446852 RAB5AP20339 215 aa13.92□□□□□ -0.18
SMC6-206ENST00000446852 PLGLAQ15195 96 aa13.92□□□□□ -0.18
SMC6-206ENST00000446852 TMEM241Q24JQ0 296 aa13.92□□□□□ -0.18
SMC6-206ENST00000446852 MRPL41Q8IXM3 137 aaKnown RBP13.92□□□□□ -0.18
SMC6-206ENST00000446852 TMEM37Q8WXS4 190 aa13.92□□□□□ -0.18
SMC6-206ENST00000446852 MISP3Q96FF7 219 aa13.92□□□□□ -0.18
SMC6-206ENST00000446852 IGHV2-70DA0A0C4DH43 119 aa13.92□□□□□ -0.18
SMC6-206ENST00000446852 PSMB11A5LHX3 300 aa13.92□□□□□ -0.18
SMC6-206ENST00000446852 ZFP82Q8N141 532 aa13.92□□□□□ -0.18
SMC6-206ENST00000446852 DMRT1Q9Y5R6 373 aa13.92□□□□□ -0.18
SMC6-206ENST00000446852 ABCA1O95477 2261 aa13.92□□□□□ -0.18
SMC6-206ENST00000446852 ZNF462Q96JM2 2506 aa13.92□□□□□ -0.18
SMC6-206ENST00000446852 PDE6DO43924 150 aa13.91□□□□□ -0.18
SMC6-206ENST00000446852 PRB1P04280 392 aa13.91□□□□□ -0.18
SMC6-206ENST00000446852 CRYGCP07315 174 aa13.91□□□□□ -0.18
SMC6-206ENST00000446852 OR5G3P0C626 314 aa13.91□□□□□ -0.18
SMC6-206ENST00000446852 RND2P52198 227 aa13.91□□□□□ -0.18
SMC6-206ENST00000446852 ZNF90Q03938 601 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms