RNA–Protein interactions for RNA: ENST00000445181.5

C9orf3-207, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 873 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-207ENST00000445181 ANKRD55Q3KP44 614 aa18.3■□□□□ 0.52
C9orf3-207ENST00000445181 PINX1Q96BK5 328 aaKnown RBP18.3■□□□□ 0.52
C9orf3-207ENST00000445181 C21orf62Q9NYP8 219 aa18.3■□□□□ 0.52
C9orf3-207ENST00000445181 PEMTQ9UBM1 199 aa18.3■□□□□ 0.52
C9orf3-207ENST00000445181 CACFD1Q9UGQ2 172 aa18.3■□□□□ 0.52
C9orf3-207ENST00000445181 DUXBA0A1W2PPF3 345 aa18.29■□□□□ 0.52
C9orf3-207ENST00000445181 CEBPZOSA8MTT3 80 aa18.29■□□□□ 0.52
C9orf3-207ENST00000445181 INS-IGF2F8WCM5 200 aa18.29■□□□□ 0.52
C9orf3-207ENST00000445181 SMCO1Q147U7 214 aa18.29■□□□□ 0.52
C9orf3-207ENST00000445181 AARDQ4LEZ3 155 aa18.29■□□□□ 0.52
C9orf3-207ENST00000445181 NMSQ5H8A3 153 aa18.29■□□□□ 0.52
C9orf3-207ENST00000445181 PLET1Q6UQ28 207 aa18.29■□□□□ 0.52
C9orf3-207ENST00000445181 UBAC2Q8NBM4 344 aa18.29■□□□□ 0.52
C9orf3-207ENST00000445181 SCARB1Q8WTV0 552 aa18.29■□□□□ 0.52
C9orf3-207ENST00000445181 OR2T8A6NH00 312 aa18.28■□□□□ 0.52
C9orf3-207ENST00000445181 K7EIM0 57 aa18.28■□□□□ 0.52
C9orf3-207ENST00000445181 FAM106AQ4KMX7 169 aa18.28■□□□□ 0.52
C9orf3-207ENST00000445181 Q56UQ5 140 aa18.28■□□□□ 0.52
C9orf3-207ENST00000445181 HEYLQ9NQ87 328 aaPredicted RBP18.28■□□□□ 0.52
C9orf3-207ENST00000445181 LY86O95711 162 aa18.27■□□□□ 0.52
C9orf3-207ENST00000445181 ANXA7P20073 488 aaKnown RBP18.27■□□□□ 0.52
C9orf3-207ENST00000445181 C4orf46Q504U0 113 aa18.27■□□□□ 0.52
C9orf3-207ENST00000445181 LRTM2Q8N967 370 aa18.27■□□□□ 0.52
C9orf3-207ENST00000445181 OR1S1Q8NH92 325 aa18.27■□□□□ 0.52
C9orf3-207ENST00000445181 A0A1B0GU03 582 aa18.26■□□□□ 0.51
C9orf3-207ENST00000445181 ZNF320A2RRD8 509 aa18.26■□□□□ 0.51
C9orf3-207ENST00000445181 C9orf170A2RU37 121 aa18.26■□□□□ 0.51
C9orf3-207ENST00000445181 TGOLN2O43493 480 aa18.26■□□□□ 0.51
C9orf3-207ENST00000445181 MT-CO2P00403 227 aa18.26■□□□□ 0.51
C9orf3-207ENST00000445181 OR4E1P0C645 316 aa18.26■□□□□ 0.51
C9orf3-207ENST00000445181 HAPLN4Q86UW8 402 aa18.26■□□□□ 0.51
C9orf3-207ENST00000445181 GPHB5Q86YW7 130 aa18.26■□□□□ 0.51
C9orf3-207ENST00000445181 BSCL2Q96G97 398 aaPredicted RBP18.26■□□□□ 0.51
C9orf3-207ENST00000445181 ZNF256Q9Y2P7 627 aaPredicted RBP18.26■□□□□ 0.51
C9orf3-207ENST00000445181 I3L2K1 104 aa18.25■□□□□ 0.51
C9orf3-207ENST00000445181 HOXB5P09067 269 aa18.25■□□□□ 0.51
C9orf3-207ENST00000445181 RNASE2P10153 161 aaKnown RBP18.25■□□□□ 0.51
C9orf3-207ENST00000445181 IL34Q6ZMJ4 242 aa18.25■□□□□ 0.51
C9orf3-207ENST00000445181 PRR25Q96S07 402 aa18.25■□□□□ 0.51
C9orf3-207ENST00000445181 C20orf85Q9H1P6 137 aa18.25■□□□□ 0.51
C9orf3-207ENST00000445181 HIPK2Q9H2X6 1198 aa18.25■□□□□ 0.51
C9orf3-207ENST00000445181 TMED3Q9Y3Q3 217 aa18.25■□□□□ 0.51
C9orf3-207ENST00000445181 IGHV3-35A0A0C4DH35 117 aa18.24■□□□□ 0.51
C9orf3-207ENST00000445181 CORTO00230 105 aa18.24■□□□□ 0.51
C9orf3-207ENST00000445181 IGHV3-48P01763 117 aa18.24■□□□□ 0.51
C9orf3-207ENST00000445181 CSN3P07498 182 aa18.24■□□□□ 0.51
C9orf3-207ENST00000445181 HTR2BP41595 481 aa18.24■□□□□ 0.51
C9orf3-207ENST00000445181 MFAP4P55083 255 aa18.24■□□□□ 0.51
C9orf3-207ENST00000445181 TNFRSF9Q07011 255 aa18.24■□□□□ 0.51
C9orf3-207ENST00000445181 DHRS2Q13268 280 aa18.24■□□□□ 0.51
C9orf3-207ENST00000445181 MZT2BQ6NZ67 158 aa18.24■□□□□ 0.51
C9orf3-207ENST00000445181 LYG2Q86SG7 212 aa18.24■□□□□ 0.51
C9orf3-207ENST00000445181 COQ8AQ8NI60 647 aa18.24■□□□□ 0.51
C9orf3-207ENST00000445181 ATP6V0BQ99437 205 aa18.24■□□□□ 0.51
C9orf3-207ENST00000445181 GAR1Q9NY12 217 aaKnown RBP18.24■□□□□ 0.51
C9orf3-207ENST00000445181 LGALS9O00182 355 aa18.23■□□□□ 0.51
C9orf3-207ENST00000445181 TCRBP04435 133 aa18.23■□□□□ 0.51
C9orf3-207ENST00000445181 SPSB3Q6PJ21 355 aa18.23■□□□□ 0.51
C9orf3-207ENST00000445181 HSPB7Q9UBY9 170 aa18.23■□□□□ 0.51
C9orf3-207ENST00000445181 SORL1Q92673 2214 aa18.22■□□□□ 0.51
C9orf3-207ENST00000445181 TRAV6A0A075B6T7 132 aa18.22■□□□□ 0.51
C9orf3-207ENST00000445181 FAM240BA0A1B0GVZ2 78 aa18.22■□□□□ 0.51
C9orf3-207ENST00000445181 UPK1BO75841 260 aa18.22■□□□□ 0.51
C9orf3-207ENST00000445181 IGLV1-51P01701 117 aa18.22■□□□□ 0.51
C9orf3-207ENST00000445181 SPNP16150 400 aa18.22■□□□□ 0.51
C9orf3-207ENST00000445181 CD69Q07108 199 aa18.22■□□□□ 0.51
C9orf3-207ENST00000445181 DCTN2Q13561 401 aaKnown RBP18.22■□□□□ 0.51
C9orf3-207ENST00000445181 RBKSQ9H477 322 aa18.22■□□□□ 0.51
C9orf3-207ENST00000445181 SIGLEC8Q9NYZ4 499 aa18.22■□□□□ 0.51
C9orf3-207ENST00000445181 OPRK1P41145 380 aa18.21■□□□□ 0.51
C9orf3-207ENST00000445181 BSXQ3C1V8 233 aa18.21■□□□□ 0.51
C9orf3-207ENST00000445181 GGNBP1Q5YKI7 109 aa18.21■□□□□ 0.51
C9orf3-207ENST00000445181 DUSP18Q8NEJ0 188 aa18.21■□□□□ 0.51
C9orf3-207ENST00000445181 SLC24A4Q8NFF2 622 aa18.21■□□□□ 0.51
C9orf3-207ENST00000445181 DTD1Q8TEA8 209 aa18.21■□□□□ 0.51
C9orf3-207ENST00000445181 DYNLRB2Q8TF09 96 aa18.21■□□□□ 0.51
C9orf3-207ENST00000445181 TXN2Q99757 166 aa18.21■□□□□ 0.51
C9orf3-207ENST00000445181 CHRDL1Q9BU40 450 aa18.21■□□□□ 0.51
C9orf3-207ENST00000445181 PALMDQ9NP74 551 aa18.21■□□□□ 0.51
C9orf3-207ENST00000445181 NUDT15Q9NV35 164 aa18.21■□□□□ 0.51
C9orf3-207ENST00000445181 TBC1D24Q9ULP9 559 aa18.21■□□□□ 0.51
C9orf3-207ENST00000445181 C2orf70A6NJV1 201 aa18.2■□□□□ 0.5
C9orf3-207ENST00000445181 F8W735 103 aaPredicted RBP18.2■□□□□ 0.5
C9orf3-207ENST00000445181 NUPL2O15504 423 aaKnown RBP18.2■□□□□ 0.5
C9orf3-207ENST00000445181 GNG7O60262 68 aa18.2■□□□□ 0.5
C9orf3-207ENST00000445181 SLC25A6P12236 298 aa18.2■□□□□ 0.5
C9orf3-207ENST00000445181 ASAH1Q13510 395 aa18.2■□□□□ 0.5
C9orf3-207ENST00000445181 B9D2Q9BPU9 175 aa18.2■□□□□ 0.5
C9orf3-207ENST00000445181 IFNA10P01566 189 aa18.19■□□□□ 0.5
C9orf3-207ENST00000445181 IFNA21P01568 189 aa18.19■□□□□ 0.5
C9orf3-207ENST00000445181 FOLR2P14207 255 aa18.19■□□□□ 0.5
C9orf3-207ENST00000445181 NPBWR1P48145 328 aa18.19■□□□□ 0.5
C9orf3-207ENST00000445181 PVRIGQ6DKI7 326 aa18.19■□□□□ 0.5
C9orf3-207ENST00000445181 UNQ9165/PRO28630Q6UXU0 137 aa18.19■□□□□ 0.5
C9orf3-207ENST00000445181 ZNF436Q9C0F3 470 aaPredicted RBP18.19■□□□□ 0.5
C9orf3-207ENST00000445181 UFC1Q9Y3C8 167 aa18.19■□□□□ 0.5
C9orf3-207ENST00000445181 PITX3O75364 302 aa18.18■□□□□ 0.5
C9orf3-207ENST00000445181 ADAP1O75689 374 aa18.18■□□□□ 0.5
C9orf3-207ENST00000445181 CTSGP08311 255 aa18.18■□□□□ 0.5
C9orf3-207ENST00000445181 GP9P14770 177 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms