RNA–Protein interactions for RNA: ENST00000444237.2

SCN11A-202, Transcript of sodium voltage-gated channel alpha subunit 11, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SCN11A, Length 5,729 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11A-202ENST00000444237 COQ2Q96H96 371 aa4.32□□□□□ -1.72
SCN11A-202ENST00000444237 FBXL15Q9H469 300 aa4.32□□□□□ -1.72
SCN11A-202ENST00000444237 ANAPC10Q9UM13 185 aa4.32□□□□□ -1.72
SCN11A-202ENST00000444237 TCF19Q9Y242 345 aa4.32□□□□□ -1.72
SCN11A-202ENST00000444237 SPAG17Q6Q759 2223 aa4.32□□□□□ -1.72
SCN11A-202ENST00000444237 ZNF785A8K8V0 405 aa4.32□□□□□ -1.72
SCN11A-202ENST00000444237 IFNL4K9M1U5 179 aa4.32□□□□□ -1.72
SCN11A-202ENST00000444237 NDUFB8O95169 186 aa4.32□□□□□ -1.72
SCN11A-202ENST00000444237 TRACP01848 142 aa4.32□□□□□ -1.72
SCN11A-202ENST00000444237 FOLR3P41439 243 aa4.32□□□□□ -1.72
SCN11A-202ENST00000444237 DSCR4P56555 118 aaPredicted RBP4.32□□□□□ -1.72
SCN11A-202ENST00000444237 C5orf64Q2M2E5 130 aa4.32□□□□□ -1.72
SCN11A-202ENST00000444237 TMEM178AQ8NBL3 297 aa4.32□□□□□ -1.72
SCN11A-202ENST00000444237 ZNF488Q96MN9 340 aa4.32□□□□□ -1.72
SCN11A-202ENST00000444237 ZNF236Q9UL36 1845 aa4.32□□□□□ -1.72
SCN11A-202ENST00000444237 A0A0G2JMZ2 1700 aa4.32□□□□□ -1.72
SCN11A-202ENST00000444237 LRRC37A2A6NM11 1700 aa4.32□□□□□ -1.72
SCN11A-202ENST00000444237 MGAMO43451 1857 aa4.32□□□□□ -1.72
SCN11A-202ENST00000444237 LOC101059948A0A1B0GTJ6 334 aa4.32□□□□□ -1.72
SCN11A-202ENST00000444237 FOXH1O75593 365 aa4.32□□□□□ -1.72
SCN11A-202ENST00000444237 IGHV3-9P01782 118 aa4.32□□□□□ -1.72
SCN11A-202ENST00000444237 LEPP41159 167 aa4.32□□□□□ -1.72
SCN11A-202ENST00000444237 SPANXN1Q5VSR9 72 aa4.32□□□□□ -1.72
SCN11A-202ENST00000444237 SFTA2Q6UW10 78 aa4.32□□□□□ -1.72
SCN11A-202ENST00000444237 ZNF721Q8TF20 911 aa4.32□□□□□ -1.72
SCN11A-202ENST00000444237 ABHD17AQ96GS6 310 aa4.32□□□□□ -1.72
SCN11A-202ENST00000444237 ERG28Q9UKR5 140 aa4.32□□□□□ -1.72
SCN11A-202ENST00000444237 PIKFYVEQ9Y2I7 2098 aa4.32□□□□□ -1.72
SCN11A-202ENST00000444237 A0A096LPE4 126 aa4.32□□□□□ -1.72
SCN11A-202ENST00000444237 A0A1W2PPZ6 126 aa4.32□□□□□ -1.72
SCN11A-202ENST00000444237 TNFSF14O43557 240 aa4.32□□□□□ -1.72
SCN11A-202ENST00000444237 PRSS2P07478 247 aa4.32□□□□□ -1.72
SCN11A-202ENST00000444237 ZNF146Q15072 292 aa4.32□□□□□ -1.72
SCN11A-202ENST00000444237 TMEM14EPQ6UXP3 125 aa4.32□□□□□ -1.72
SCN11A-202ENST00000444237 SLC25A48Q6ZT89 311 aaKnown RBP4.32□□□□□ -1.72
SCN11A-202ENST00000444237 MIR17HGQ75NE6 70 aa4.32□□□□□ -1.72
SCN11A-202ENST00000444237 C1QTNF5Q9BXJ0 243 aa4.32□□□□□ -1.72
SCN11A-202ENST00000444237 ARRDC1-AS1Q9H2J1 176 aa4.32□□□□□ -1.72
SCN11A-202ENST00000444237 CXCL13O43927 109 aa4.32□□□□□ -1.72
SCN11A-202ENST00000444237 SRSF7Q16629 238 aaKnown RBP eCLIP4.32□□□□□ -1.72
SCN11A-202ENST00000444237 FAM27BQ5VT28 67 aa4.32□□□□□ -1.72
SCN11A-202ENST00000444237 Q6ZS52 159 aa4.32□□□□□ -1.72
SCN11A-202ENST00000444237 CIARTQ8N365 385 aaPredicted RBP4.32□□□□□ -1.72
SCN11A-202ENST00000444237 NUP35Q8NFH5 326 aa4.32□□□□□ -1.72
SCN11A-202ENST00000444237 RPP25Q9BUL9 199 aaKnown RBP4.32□□□□□ -1.72
SCN11A-202ENST00000444237 OR2H1Q9GZK4 316 aa4.32□□□□□ -1.72
SCN11A-202ENST00000444237 C11orf68Q9H3H3 251 aaKnown RBP4.32□□□□□ -1.72
SCN11A-202ENST00000444237 SHISA8B8ZZ34 492 aa4.31□□□□□ -1.72
SCN11A-202ENST00000444237 F5H697 171 aa4.31□□□□□ -1.72
SCN11A-202ENST00000444237 H3BMG7 143 aa4.31□□□□□ -1.72
SCN11A-202ENST00000444237 MOSP00540 346 aa4.31□□□□□ -1.72
SCN11A-202ENST00000444237 QRFPP83859 136 aa4.31□□□□□ -1.72
SCN11A-202ENST00000444237 STPG1Q5TH74 334 aa4.31□□□□□ -1.72
SCN11A-202ENST00000444237 ATP6V0E2Q8NHE4 81 aa4.31□□□□□ -1.72
SCN11A-202ENST00000444237 RASL11BQ9BPW5 248 aa4.31□□□□□ -1.72
SCN11A-202ENST00000444237 C1orf43Q9BWL3 253 aa4.31□□□□□ -1.72
SCN11A-202ENST00000444237 TRBV20OR9-2A0A075B6H5 130 aa4.31□□□□□ -1.72
SCN11A-202ENST00000444237 IGKV1D-8A0A087WSZ0 117 aa4.31□□□□□ -1.72
SCN11A-202ENST00000444237 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.31□□□□□ -1.72
SCN11A-202ENST00000444237 IGHV3-20A0A0C4DH32 117 aa4.31□□□□□ -1.72
SCN11A-202ENST00000444237 ZNF815PA8K554 130 aa4.31□□□□□ -1.72
SCN11A-202ENST00000444237 DNAL4O96015 105 aa4.31□□□□□ -1.72
SCN11A-202ENST00000444237 IGHV4-39P01824 125 aa4.31□□□□□ -1.72
SCN11A-202ENST00000444237 CCL1P22362 96 aa4.31□□□□□ -1.72
SCN11A-202ENST00000444237 FCGR2BP31994 310 aaPredicted RBP4.31□□□□□ -1.72
SCN11A-202ENST00000444237 ZNF56Q15929 161 aa4.31□□□□□ -1.72
SCN11A-202ENST00000444237 LGALS9BQ3B8N2 356 aa4.31□□□□□ -1.72
SCN11A-202ENST00000444237 MBNL2Q5VZF2 373 aaKnown RBP4.31□□□□□ -1.72
SCN11A-202ENST00000444237 LGALS9CQ6DKI2 356 aa4.31□□□□□ -1.72
SCN11A-202ENST00000444237 MOB3BQ86TA1 216 aa4.31□□□□□ -1.72
SCN11A-202ENST00000444237 HAPLN4Q86UW8 402 aa4.31□□□□□ -1.72
SCN11A-202ENST00000444237 SMRP1Q8NCR6 262 aa4.31□□□□□ -1.72
SCN11A-202ENST00000444237 ZDHHC16Q969W1 377 aa4.31□□□□□ -1.72
SCN11A-202ENST00000444237 RNF183Q96D59 192 aa4.31□□□□□ -1.72
SCN11A-202ENST00000444237 MMP17Q9ULZ9 603 aa4.31□□□□□ -1.72
SCN11A-202ENST00000444237 ANKRD36A6QL64 1941 aa4.31□□□□□ -1.72
SCN11A-202ENST00000444237 NDUFA3O95167 84 aa4.31□□□□□ -1.72
SCN11A-202ENST00000444237 ZNF415Q09FC8 603 aa4.31□□□□□ -1.72
SCN11A-202ENST00000444237 CIRBPQ14011 172 aaKnown RBP4.31□□□□□ -1.72
SCN11A-202ENST00000444237 EFNB3Q15768 340 aa4.31□□□□□ -1.72
SCN11A-202ENST00000444237 PCSK4Q6UW60 755 aa4.31□□□□□ -1.72
SCN11A-202ENST00000444237 NUP37Q8NFH4 326 aa4.31□□□□□ -1.72
SCN11A-202ENST00000444237 YPEL4Q96NS1 127 aa4.31□□□□□ -1.72
SCN11A-202ENST00000444237 K7ESF4 209 aa4.31□□□□□ -1.72
SCN11A-202ENST00000444237 PLNP26678 52 aa4.31□□□□□ -1.72
SCN11A-202ENST00000444237 EGR4Q05215 589 aa4.31□□□□□ -1.72
SCN11A-202ENST00000444237 C2orf82Q6UX34 121 aa4.31□□□□□ -1.72
SCN11A-202ENST00000444237 SCGB3A1Q96QR1 104 aa4.31□□□□□ -1.72
SCN11A-202ENST00000444237 DLL3Q9NYJ7 618 aa4.31□□□□□ -1.72
SCN11A-202ENST00000444237 H3BMM0 161 aa4.3□□□□□ -1.72
SCN11A-202ENST00000444237 SCRG1O75711 98 aa4.3□□□□□ -1.72
SCN11A-202ENST00000444237 IGHV4-34P06331 123 aa4.3□□□□□ -1.72
SCN11A-202ENST00000444237 PRSS12P56730 875 aa4.3□□□□□ -1.72
SCN11A-202ENST00000444237 INO80CQ6PI98 192 aaPredicted RBP4.3□□□□□ -1.72
SCN11A-202ENST00000444237 GTSCR1Q86UQ5 136 aa4.3□□□□□ -1.72
SCN11A-202ENST00000444237 C1orf210Q8IVY1 113 aa4.3□□□□□ -1.72
SCN11A-202ENST00000444237 ABHD12Q8N2K0 398 aa4.3□□□□□ -1.72
SCN11A-202ENST00000444237 UBE2WQ96B02 151 aa4.3□□□□□ -1.72
SCN11A-202ENST00000444237 PLPPR2Q96GM1 343 aa4.3□□□□□ -1.72
SCN11A-202ENST00000444237 ZNF714Q96N38 554 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms