RNA–Protein interactions for RNA: ENST00000444058.1

ATPAF2-201, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 3

Gene ATPAF2, Length 685 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-201ENST00000444058 TEX13DA0A0J9YY54 714 aaPredicted RBP14.16□□□□□ -0.14
ATPAF2-201ENST00000444058 K7EMT4 169 aa14.16□□□□□ -0.14
ATPAF2-201ENST00000444058 ST8SIA3O43173 380 aa14.16□□□□□ -0.14
ATPAF2-201ENST00000444058 OR5AC1P0C628 307 aa14.16□□□□□ -0.14
ATPAF2-201ENST00000444058 SNCAP37840 140 aa14.16□□□□□ -0.14
ATPAF2-201ENST00000444058 MFAP4P55083 255 aa14.16□□□□□ -0.14
ATPAF2-201ENST00000444058 ANKRD55Q3KP44 614 aa14.16□□□□□ -0.14
ATPAF2-201ENST00000444058 Q56UQ5 140 aa14.16□□□□□ -0.14
ATPAF2-201ENST00000444058 PVRIGQ6DKI7 326 aa14.16□□□□□ -0.14
ATPAF2-201ENST00000444058 LINC00322Q6ZN03 302 aaPredicted RBP14.16□□□□□ -0.14
ATPAF2-201ENST00000444058 SLC16A13Q7RTY0 426 aa14.16□□□□□ -0.14
ATPAF2-201ENST00000444058 CHRDL1Q9BU40 450 aa14.16□□□□□ -0.14
ATPAF2-201ENST00000444058 IGHV3-21A0A0B4J1V1 117 aa14.15□□□□□ -0.14
ATPAF2-201ENST00000444058 IGHV3-35A0A0C4DH35 117 aa14.15□□□□□ -0.14
ATPAF2-201ENST00000444058 CRYM-AS1A6NIL9 109 aa14.15□□□□□ -0.14
ATPAF2-201ENST00000444058 ZNF701M0R085 212 aaPredicted RBP14.15□□□□□ -0.14
ATPAF2-201ENST00000444058 NUPL2O15504 423 aaKnown RBP14.15□□□□□ -0.14
ATPAF2-201ENST00000444058 MT-CO2P00403 227 aa14.15□□□□□ -0.14
ATPAF2-201ENST00000444058 IFNA17P01571 189 aa14.15□□□□□ -0.14
ATPAF2-201ENST00000444058 CD7P09564 240 aa14.15□□□□□ -0.14
ATPAF2-201ENST00000444058 RELQ04864 619 aaPredicted RBP14.15□□□□□ -0.14
ATPAF2-201ENST00000444058 HAGHQ16775 308 aa14.15□□□□□ -0.14
ATPAF2-201ENST00000444058 BTNL8Q6UX41 500 aa14.15□□□□□ -0.14
ATPAF2-201ENST00000444058 SLC35G3Q8N808 338 aa14.15□□□□□ -0.14
ATPAF2-201ENST00000444058 UBAC2Q8NBM4 344 aa14.15□□□□□ -0.14
ATPAF2-201ENST00000444058 OR52E5Q8NH55 327 aa14.15□□□□□ -0.14
ATPAF2-201ENST00000444058 RBPMSQ93062 196 aaKnown RBP14.15□□□□□ -0.14
ATPAF2-201ENST00000444058 MISP3Q96FF7 219 aa14.15□□□□□ -0.14
ATPAF2-201ENST00000444058 SPATA25Q9BR10 227 aa14.15□□□□□ -0.14
ATPAF2-201ENST00000444058 C15orf62A8K5M9 175 aa14.14□□□□□ -0.15
ATPAF2-201ENST00000444058 OR11H12B2RN74 326 aa14.14□□□□□ -0.15
ATPAF2-201ENST00000444058 C3orf84H3BNL1 204 aa14.14□□□□□ -0.15
ATPAF2-201ENST00000444058 CORTO00230 105 aa14.14□□□□□ -0.15
ATPAF2-201ENST00000444058 SUB1P53999 127 aaKnown RBP eCLIP14.14□□□□□ -0.15
ATPAF2-201ENST00000444058 RBPMS2Q6ZRY4 209 aaKnown RBP14.14□□□□□ -0.15
ATPAF2-201ENST00000444058 RNASE11Q8TAA1 199 aaKnown RBP14.14□□□□□ -0.15
ATPAF2-201ENST00000444058 GALNT14Q96FL9 552 aa14.14□□□□□ -0.15
ATPAF2-201ENST00000444058 CTNNBIP1Q9NSA3 81 aaPredicted RBP14.14□□□□□ -0.15
ATPAF2-201ENST00000444058 CACFD1Q9UGQ2 172 aa14.14□□□□□ -0.15
ATPAF2-201ENST00000444058 TMEM56-RWDD3S4R434 201 aa14.14□□□□□ -0.15
ATPAF2-201ENST00000444058 A0A0G2JRQ6 117 aa14.13□□□□□ -0.15
ATPAF2-201ENST00000444058 ETV6P41212 452 aa14.13□□□□□ -0.15
ATPAF2-201ENST00000444058 OR52B4Q8NGK2 314 aa14.13□□□□□ -0.15
ATPAF2-201ENST00000444058 DEDD2Q8WXF8 326 aa14.13□□□□□ -0.15
ATPAF2-201ENST00000444058 IL22RA2Q969J5 263 aa14.13□□□□□ -0.15
ATPAF2-201ENST00000444058 CITED4Q96RK1 184 aa14.13□□□□□ -0.15
ATPAF2-201ENST00000444058 RBM38Q9H0Z9 239 aaKnown RBP14.13□□□□□ -0.15
ATPAF2-201ENST00000444058 KCNIP3Q9Y2W7 256 aa14.13□□□□□ -0.15
ATPAF2-201ENST00000444058 CCDC160A6NGH7 325 aa14.12□□□□□ -0.15
ATPAF2-201ENST00000444058 S100A5P33763 92 aa14.12□□□□□ -0.15
ATPAF2-201ENST00000444058 FAUP35544 74 aaKnown RBP14.12□□□□□ -0.15
ATPAF2-201ENST00000444058 AP3S2P59780 193 aa14.12□□□□□ -0.15
ATPAF2-201ENST00000444058 SPCS3P61009 180 aa14.12□□□□□ -0.15
ATPAF2-201ENST00000444058 Q6ZRM9 215 aa14.12□□□□□ -0.15
ATPAF2-201ENST00000444058 SELENOHQ8IZQ5 122 aaKnown RBP14.12□□□□□ -0.15
ATPAF2-201ENST00000444058 LHFPL5Q8TAF8 219 aa14.12□□□□□ -0.15
ATPAF2-201ENST00000444058 OR10C1Q96KK4 312 aa14.12□□□□□ -0.15
ATPAF2-201ENST00000444058 SPAG8Q99932 426 aaPredicted RBP14.12□□□□□ -0.15
ATPAF2-201ENST00000444058 C20orf24Q9BUV8 137 aa14.12□□□□□ -0.15
ATPAF2-201ENST00000444058 ENY2Q9NPA8 101 aa14.12□□□□□ -0.15
ATPAF2-201ENST00000444058 MCUBQ9NWR8 336 aa14.12□□□□□ -0.15
ATPAF2-201ENST00000444058 TSPAN4O14817 238 aa14.11□□□□□ -0.15
ATPAF2-201ENST00000444058 GNG7O60262 68 aa14.11□□□□□ -0.15
ATPAF2-201ENST00000444058 SCAF4O95104 1147 aaKnown RBP14.11□□□□□ -0.15
ATPAF2-201ENST00000444058 NPBWR1P48145 328 aa14.11□□□□□ -0.15
ATPAF2-201ENST00000444058 HOXA1P49639 335 aaPredicted RBP14.11□□□□□ -0.15
ATPAF2-201ENST00000444058 BSXQ3C1V8 233 aa14.11□□□□□ -0.15
ATPAF2-201ENST00000444058 SPINK9Q5DT21 86 aa14.11□□□□□ -0.15
ATPAF2-201ENST00000444058 TMEM268Q5VZI3 342 aa14.11□□□□□ -0.15
ATPAF2-201ENST00000444058 LAMTOR1Q6IAA8 161 aa14.11□□□□□ -0.15
ATPAF2-201ENST00000444058 DEFB125Q8N687 156 aa14.11□□□□□ -0.15
ATPAF2-201ENST00000444058 DUSP18Q8NEJ0 188 aa14.11□□□□□ -0.15
ATPAF2-201ENST00000444058 PINX1Q96BK5 328 aaKnown RBP14.11□□□□□ -0.15
ATPAF2-201ENST00000444058 V9GYH0 126 aa14.11□□□□□ -0.15
ATPAF2-201ENST00000444058 KMT2CQ8NEZ4 4911 aaKnown RBP14.11□□□□□ -0.15
ATPAF2-201ENST00000444058 RNASE2P10153 161 aaKnown RBP14.1□□□□□ -0.15
ATPAF2-201ENST00000444058 KLF9Q13886 244 aaPredicted RBP14.1□□□□□ -0.15
ATPAF2-201ENST00000444058 MUC7Q8TAX7 377 aa14.1□□□□□ -0.15
ATPAF2-201ENST00000444058 TRIM63Q969Q1 353 aa14.1□□□□□ -0.15
ATPAF2-201ENST00000444058 TMEM230Q96A57 120 aa14.1□□□□□ -0.15
ATPAF2-201ENST00000444058 ZNF414Q96IQ9 312 aa14.1□□□□□ -0.15
ATPAF2-201ENST00000444058 SRD5A3Q9H8P0 318 aa14.1□□□□□ -0.15
ATPAF2-201ENST00000444058 PIGBOS1A0A0B4J2F0 54 aa14.09□□□□□ -0.15
ATPAF2-201ENST00000444058 TMEM187Q14656 261 aa14.09□□□□□ -0.15
ATPAF2-201ENST00000444058 PYDC2Q56P42 97 aa14.09□□□□□ -0.15
ATPAF2-201ENST00000444058 CCDC190Q86UF4 302 aa14.09□□□□□ -0.15
ATPAF2-201ENST00000444058 CACNG5Q9UF02 275 aa14.09□□□□□ -0.15
ATPAF2-201ENST00000444058 SMPXQ9UHP9 88 aa14.09□□□□□ -0.15
ATPAF2-201ENST00000444058 RBMY1BA6NDE4 496 aaKnown RBP14.08□□□□□ -0.16
ATPAF2-201ENST00000444058 RBMY1EA6NEQ0 496 aaKnown RBP14.08□□□□□ -0.16
ATPAF2-201ENST00000444058 RBMY1DP0C7P1 496 aaKnown RBP14.08□□□□□ -0.16
ATPAF2-201ENST00000444058 HTR2BP41595 481 aa14.08□□□□□ -0.16
ATPAF2-201ENST00000444058 SRPXP78539 464 aa14.08□□□□□ -0.16
ATPAF2-201ENST00000444058 TOMM5Q8N4H5 51 aa14.08□□□□□ -0.16
ATPAF2-201ENST00000444058 GPR146Q96CH1 333 aa14.08□□□□□ -0.16
ATPAF2-201ENST00000444058 WFDC10AQ9H1F0 79 aa14.08□□□□□ -0.16
ATPAF2-201ENST00000444058 HIPK2Q9H2X6 1198 aa14.08□□□□□ -0.16
ATPAF2-201ENST00000444058 EDA2RQ9HAV5 297 aa14.08□□□□□ -0.16
ATPAF2-201ENST00000444058 SELENOKQ9Y6D0 94 aa14.08□□□□□ -0.16
ATPAF2-201ENST00000444058 A0A0B4J2A0 478 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 98.1 ms