RNA–Protein interactions for RNA: ENST00000443839.1

SMPD4P1-203, Transcript of sphingomyelin phosphodiesterase 4 pseudogene 1, humanhuman

TSL 1 (best) BASIC

Gene SMPD4P1, Length 2,108 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4P1-203ENST00000443839 MAJINQ3KP22 176 aa7.57□□□□□ -1.2
SMPD4P1-203ENST00000443839 SAT2Q96F10 170 aaPredicted RBP7.57□□□□□ -1.2
SMPD4P1-203ENST00000443839 GINS3Q9BRX5 216 aa7.57□□□□□ -1.2
SMPD4P1-203ENST00000443839 TMEM147Q9BVK8 224 aa7.57□□□□□ -1.2
SMPD4P1-203ENST00000443839 SH3BGRL3Q9H299 93 aa7.57□□□□□ -1.2
SMPD4P1-203ENST00000443839 ARV1Q9H2C2 271 aa7.57□□□□□ -1.2
SMPD4P1-203ENST00000443839 UQCC1Q9NVA1 299 aa7.57□□□□□ -1.2
SMPD4P1-203ENST00000443839 CARHSP1Q9Y2V2 147 aaKnown RBP7.57□□□□□ -1.2
SMPD4P1-203ENST00000443839 OTOGQ6ZRI0 2925 aa7.56□□□□□ -1.2
SMPD4P1-203ENST00000443839 IGLC7A0M8Q6 106 aa7.56□□□□□ -1.2
SMPD4P1-203ENST00000443839 SMCO3A2RU48 225 aa7.56□□□□□ -1.2
SMPD4P1-203ENST00000443839 ZNF705EA8MWA4 302 aaPredicted RBP7.56□□□□□ -1.2
SMPD4P1-203ENST00000443839 REG1AP05451 166 aa7.56□□□□□ -1.2
SMPD4P1-203ENST00000443839 H2AFB1P0C5Y9 115 aa7.56□□□□□ -1.2
SMPD4P1-203ENST00000443839 SUB1P53999 127 aaKnown RBP eCLIP7.56□□□□□ -1.2
SMPD4P1-203ENST00000443839 SSBP2P81877 361 aaPredicted RBP7.56□□□□□ -1.2
SMPD4P1-203ENST00000443839 RUNX1Q01196 453 aa7.56□□□□□ -1.2
SMPD4P1-203ENST00000443839 FXYD3Q14802 87 aa7.56□□□□□ -1.2
SMPD4P1-203ENST00000443839 GUCA2BQ16661 112 aa7.56□□□□□ -1.2
SMPD4P1-203ENST00000443839 TMEM219Q86XT9 240 aa7.56□□□□□ -1.2
SMPD4P1-203ENST00000443839 Q8N9W7 124 aa7.56□□□□□ -1.2
SMPD4P1-203ENST00000443839 ABHD5Q8WTS1 349 aa7.56□□□□□ -1.2
SMPD4P1-203ENST00000443839 SSMEM1Q8WWF3 244 aa7.56□□□□□ -1.2
SMPD4P1-203ENST00000443839 C22orf15Q8WYQ4 148 aa7.56□□□□□ -1.2
SMPD4P1-203ENST00000443839 GNPNAT1Q96EK6 184 aaPredicted RBP7.56□□□□□ -1.2
SMPD4P1-203ENST00000443839 RASL11BQ9BPW5 248 aa7.56□□□□□ -1.2
SMPD4P1-203ENST00000443839 KRTAP3-3Q9BYR6 98 aa7.56□□□□□ -1.2
SMPD4P1-203ENST00000443839 KRTAP3-2Q9BYR7 98 aa7.56□□□□□ -1.2
SMPD4P1-203ENST00000443839 H3BUX3 64 aa7.55□□□□□ -1.2
SMPD4P1-203ENST00000443839 TSPAN9O75954 239 aa7.55□□□□□ -1.2
SMPD4P1-203ENST00000443839 RNASE2P10153 161 aaKnown RBP7.55□□□□□ -1.2
SMPD4P1-203ENST00000443839 AREGP15514 252 aa7.55□□□□□ -1.2
SMPD4P1-203ENST00000443839 ATP6V0CP27449 155 aa7.55□□□□□ -1.2
SMPD4P1-203ENST00000443839 BSXQ3C1V8 233 aa7.55□□□□□ -1.2
SMPD4P1-203ENST00000443839 C2orf83Q53S99 150 aa7.55□□□□□ -1.2
SMPD4P1-203ENST00000443839 ZNF562Q6V9R5 426 aa7.55□□□□□ -1.2
SMPD4P1-203ENST00000443839 ARPC1AQ92747 370 aa7.55□□□□□ -1.2
SMPD4P1-203ENST00000443839 TEX22C9J3V5 150 aa7.55□□□□□ -1.2
SMPD4P1-203ENST00000443839 SEC11BP0C7V7 166 aa7.55□□□□□ -1.2
SMPD4P1-203ENST00000443839 SPP1P10451 314 aa7.55□□□□□ -1.2
SMPD4P1-203ENST00000443839 CX3CL1P78423 397 aa7.55□□□□□ -1.2
SMPD4P1-203ENST00000443839 PIFOQ8TCI5 191 aa7.55□□□□□ -1.2
SMPD4P1-203ENST00000443839 P2RX4Q99571 388 aa7.55□□□□□ -1.2
SMPD4P1-203ENST00000443839 SLC25A33Q9BSK2 321 aa7.55□□□□□ -1.2
SMPD4P1-203ENST00000443839 FAM103A1Q9BTL3 118 aaKnown RBP7.55□□□□□ -1.2
SMPD4P1-203ENST00000443839 GGACTQ9BVM4 153 aa7.55□□□□□ -1.2
SMPD4P1-203ENST00000443839 SEC11CQ9BY50 192 aa7.55□□□□□ -1.2
SMPD4P1-203ENST00000443839 WDR61Q9GZS3 305 aaKnown RBP7.55□□□□□ -1.2
SMPD4P1-203ENST00000443839 MDFIC2A0A1B0GVS7 189 aa7.54□□□□□ -1.2
SMPD4P1-203ENST00000443839 PRSS46E5RG02 174 aa7.54□□□□□ -1.2
SMPD4P1-203ENST00000443839 F8W036 122 aa7.54□□□□□ -1.2
SMPD4P1-203ENST00000443839 HLA-DRB1P01911 266 aa7.54□□□□□ -1.2
SMPD4P1-203ENST00000443839 FGF7P21781 194 aa7.54□□□□□ -1.2
SMPD4P1-203ENST00000443839 BLOC1S1P78537 153 aa7.54□□□□□ -1.2
SMPD4P1-203ENST00000443839 DLK1P80370 383 aa7.54□□□□□ -1.2
SMPD4P1-203ENST00000443839 RELQ04864 619 aaPredicted RBP7.54□□□□□ -1.2
SMPD4P1-203ENST00000443839 LY6EQ16553 131 aa7.54□□□□□ -1.2
SMPD4P1-203ENST00000443839 VWC2Q2TAL6 325 aa7.54□□□□□ -1.2
SMPD4P1-203ENST00000443839 BCL6BQ8N143 479 aaPredicted RBP7.54□□□□□ -1.2
SMPD4P1-203ENST00000443839 OR2G3Q8NGZ4 309 aa7.54□□□□□ -1.2
SMPD4P1-203ENST00000443839 TAF15Q92804 592 aaKnown RBP eCLIP7.54□□□□□ -1.2
SMPD4P1-203ENST00000443839 SRSF8Q9BRL6 282 aaKnown RBP7.54□□□□□ -1.2
SMPD4P1-203ENST00000443839 MOB4Q9Y3A3 225 aa7.54□□□□□ -1.2
SMPD4P1-203ENST00000443839 FSHBP01225 129 aa7.54□□□□□ -1.2
SMPD4P1-203ENST00000443839 PRH1P02810 166 aa7.54□□□□□ -1.2
SMPD4P1-203ENST00000443839 OPRK1P41145 380 aa7.54□□□□□ -1.2
SMPD4P1-203ENST00000443839 SULT1A2P50226 295 aa7.54□□□□□ -1.2
SMPD4P1-203ENST00000443839 FLI1Q01543 452 aaPredicted RBP7.54□□□□□ -1.2
SMPD4P1-203ENST00000443839 DEFB112Q30KQ8 113 aa7.54□□□□□ -1.2
SMPD4P1-203ENST00000443839 TMEM182Q6ZP80 229 aaPredicted RBP7.54□□□□□ -1.2
SMPD4P1-203ENST00000443839 RSG1Q9BU20 258 aa7.54□□□□□ -1.2
SMPD4P1-203ENST00000443839 PARD6GQ9BYG4 376 aaPredicted RBP7.54□□□□□ -1.2
SMPD4P1-203ENST00000443839 HRH4Q9H3N8 390 aa7.54□□□□□ -1.2
SMPD4P1-203ENST00000443839 TREM1Q9NP99 234 aa7.54□□□□□ -1.2
SMPD4P1-203ENST00000443839 PITPNC1Q9UKF7 332 aa7.54□□□□□ -1.2
SMPD4P1-203ENST00000443839 MTORP42345 2549 aa7.53□□□□□ -1.2
SMPD4P1-203ENST00000443839 IGHV7-81A0A0B4J1V7 117 aa7.53□□□□□ -1.2
SMPD4P1-203ENST00000443839 SNAPINO95295 136 aa7.53□□□□□ -1.2
SMPD4P1-203ENST00000443839 DEFA4P12838 97 aa7.53□□□□□ -1.2
SMPD4P1-203ENST00000443839 NDPQ00604 133 aa7.53□□□□□ -1.2
SMPD4P1-203ENST00000443839 TMEM88Q6PEY1 159 aa7.53□□□□□ -1.2
SMPD4P1-203ENST00000443839 BTNL8Q6UX41 500 aa7.53□□□□□ -1.2
SMPD4P1-203ENST00000443839 TEX29Q8N6K0 151 aa7.53□□□□□ -1.2
SMPD4P1-203ENST00000443839 C5orf56Q8N8D9 126 aa7.53□□□□□ -1.2
SMPD4P1-203ENST00000443839 ZNF709Q8N972 641 aa7.53□□□□□ -1.2
SMPD4P1-203ENST00000443839 ZNF114Q8NC26 417 aa7.53□□□□□ -1.2
SMPD4P1-203ENST00000443839 OR1P1Q8NH06 330 aa7.53□□□□□ -1.2
SMPD4P1-203ENST00000443839 RNASEH2CQ8TDP1 164 aaKnown RBP7.53□□□□□ -1.2
SMPD4P1-203ENST00000443839 MISP3Q96FF7 219 aa7.53□□□□□ -1.2
SMPD4P1-203ENST00000443839 TMEM231Q9H6L2 316 aa7.53□□□□□ -1.2
SMPD4P1-203ENST00000443839 PARP11Q9NR21 331 aa7.53□□□□□ -1.2
SMPD4P1-203ENST00000443839 PLA2G2EQ9NZK7 142 aa7.53□□□□□ -1.2
SMPD4P1-203ENST00000443839 FBXO7Q9Y3I1 522 aa7.53□□□□□ -1.2
SMPD4P1-203ENST00000443839 RFNGQ9Y644 331 aa7.53□□□□□ -1.2
SMPD4P1-203ENST00000443839 ARSJQ5FYB0 599 aaPredicted RBP7.52□□□□□ -1.2
SMPD4P1-203ENST00000443839 TREML4Q6UXN2 200 aa7.52□□□□□ -1.2
SMPD4P1-203ENST00000443839 SPNS3Q6ZMD2 512 aa7.52□□□□□ -1.2
SMPD4P1-203ENST00000443839 C19orf35Q6ZS72 473 aa7.52□□□□□ -1.2
SMPD4P1-203ENST00000443839 C9orf139Q6ZV77 190 aa7.52□□□□□ -1.2
SMPD4P1-203ENST00000443839 CBLN2Q8IUK8 224 aa7.52□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms