RNA–Protein interactions for RNA: ENST00000443617.6

HERC1-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERC1, Length 15,137 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-201ENST00000443617 TREML4Q6UXN2 200 aa4.18□□□□□ -1.74
HERC1-201ENST00000443617 RLN3Q8WXF3 142 aa4.18□□□□□ -1.74
HERC1-201ENST00000443617 CDX2Q99626 313 aaPredicted RBP4.18□□□□□ -1.74
HERC1-201ENST00000443617 OOEPA6NGQ2 149 aa4.18□□□□□ -1.74
HERC1-201ENST00000443617 C8orf88P0DMB2 117 aa4.18□□□□□ -1.74
HERC1-201ENST00000443617 EFNB3Q15768 340 aa4.18□□□□□ -1.74
HERC1-201ENST00000443617 KRTAP27-1Q3LI81 207 aa4.18□□□□□ -1.74
HERC1-201ENST00000443617 FOXL2NBQ6ZUU3 175 aa4.18□□□□□ -1.74
HERC1-201ENST00000443617 TCF19Q9Y242 345 aa4.18□□□□□ -1.74
HERC1-201ENST00000443617 SETD2Q9BYW2 2564 aaPredicted RBP4.18□□□□□ -1.74
HERC1-201ENST00000443617 PEX7O00628 323 aa4.18□□□□□ -1.74
HERC1-201ENST00000443617 IGHV4-34P06331 123 aa4.18□□□□□ -1.74
HERC1-201ENST00000443617 Q6P435 159 aa4.18□□□□□ -1.74
HERC1-201ENST00000443617 POM121L2Q96KW2 1035 aa4.18□□□□□ -1.74
HERC1-201ENST00000443617 PLXNA2O75051 1894 aa4.18□□□□□ -1.74
HERC1-201ENST00000443617 STAG3L2P0CL84 134 aa4.18□□□□□ -1.74
HERC1-201ENST00000443617 STAG3L3P0CL85 134 aa4.18□□□□□ -1.74
HERC1-201ENST00000443617 SMIM17P0DL12 118 aa4.18□□□□□ -1.74
HERC1-201ENST00000443617 FCER1GP30273 86 aa4.18□□□□□ -1.74
HERC1-201ENST00000443617 NFAM1Q8NET5 270 aaPredicted RBP4.18□□□□□ -1.74
HERC1-201ENST00000443617 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP4.18□□□□□ -1.74
HERC1-201ENST00000443617 C16orf54Q6UWD8 224 aa4.18□□□□□ -1.74
HERC1-201ENST00000443617 PRSS57Q6UWY2 283 aa4.18□□□□□ -1.74
HERC1-201ENST00000443617 NEUROG1Q92886 237 aa4.18□□□□□ -1.74
HERC1-201ENST00000443617 OR9G9P0C7N8 305 aa4.17□□□□□ -1.74
HERC1-201ENST00000443617 PRR31Q5SQ13 230 aa4.17□□□□□ -1.74
HERC1-201ENST00000443617 ATP5L2Q7Z4Y8 100 aa4.17□□□□□ -1.74
HERC1-201ENST00000443617 PDPNQ86YL7 162 aa4.17□□□□□ -1.74
HERC1-201ENST00000443617 FAM90A9PA6NNJ1 464 aa4.17□□□□□ -1.74
HERC1-201ENST00000443617 ZNHIT1O43257 154 aa4.17□□□□□ -1.74
HERC1-201ENST00000443617 CELA3BP08861 270 aa4.17□□□□□ -1.74
HERC1-201ENST00000443617 RPS19BP1Q86WX3 136 aaKnown RBP4.17□□□□□ -1.74
HERC1-201ENST00000443617 ADH4P08319 380 aa4.17□□□□□ -1.74
HERC1-201ENST00000443617 ABHD17BQ5VST6 288 aa4.17□□□□□ -1.74
HERC1-201ENST00000443617 TMEM177Q53S58 311 aa4.17□□□□□ -1.74
HERC1-201ENST00000443617 PKIBQ9C010 78 aa4.17□□□□□ -1.74
HERC1-201ENST00000443617 OR4A5Q8NH83 315 aa4.17□□□□□ -1.74
HERC1-201ENST00000443617 GGTLC1Q9BX51 225 aa4.17□□□□□ -1.74
HERC1-201ENST00000443617 CHCHD2Q9Y6H1 151 aaPredicted RBP4.17□□□□□ -1.74
HERC1-201ENST00000443617 CEP192Q8TEP8 1941 aa4.17□□□□□ -1.74
HERC1-201ENST00000443617 C5orf30Q96GV9 206 aa4.17□□□□□ -1.74
HERC1-201ENST00000443617 USP9YO00507 2555 aaPredicted RBP4.17□□□□□ -1.74
HERC1-201ENST00000443617 SRFP11831 508 aa4.17□□□□□ -1.74
HERC1-201ENST00000443617 SUB1P53999 127 aaKnown RBP eCLIP4.17□□□□□ -1.74
HERC1-201ENST00000443617 PSMG4Q5JS54 123 aa4.17□□□□□ -1.74
HERC1-201ENST00000443617 CCDC168Q8NDH2 2452 aa4.17□□□□□ -1.74
HERC1-201ENST00000443617 CCL3P10147 92 aa4.17□□□□□ -1.74
HERC1-201ENST00000443617 ARL3P36405 182 aa4.17□□□□□ -1.74
HERC1-201ENST00000443617 TIMM23BQ5SRD1 257 aa4.17□□□□□ -1.74
HERC1-201ENST00000443617 TMEM140Q9NV12 185 aa4.17□□□□□ -1.74
HERC1-201ENST00000443617 RNF114Q9Y508 228 aa4.17□□□□□ -1.74
HERC1-201ENST00000443617 ACACBO00763 2458 aa4.17□□□□□ -1.74
HERC1-201ENST00000443617 TNRC6AQ8NDV7 1962 aaKnown RBP4.17□□□□□ -1.74
HERC1-201ENST00000443617 KLF7O75840 302 aaPredicted RBP4.17□□□□□ -1.74
HERC1-201ENST00000443617 ATP5IP56385 69 aaPredicted RBP4.17□□□□□ -1.74
HERC1-201ENST00000443617 BHLHA15Q7RTS1 189 aaPredicted RBP4.17□□□□□ -1.74
HERC1-201ENST00000443617 SPEM1Q8N4L4 309 aa4.17□□□□□ -1.74
HERC1-201ENST00000443617 RAB9BQ9NP90 201 aa4.17□□□□□ -1.74
HERC1-201ENST00000443617 PRDM6Q9NQX0 595 aa4.17□□□□□ -1.74
HERC1-201ENST00000443617 AP5S1Q9NUS5 200 aa4.17□□□□□ -1.74
HERC1-201ENST00000443617 NCKAP5O14513 1909 aa4.17□□□□□ -1.74
HERC1-201ENST00000443617 WIPI1Q5MNZ9 446 aaPredicted RBP4.17□□□□□ -1.74
HERC1-201ENST00000443617 PHF7Q9BWX1 381 aaPredicted RBP4.17□□□□□ -1.74
HERC1-201ENST00000443617 A0A1W2PPC4 97 aa4.17□□□□□ -1.74
HERC1-201ENST00000443617 SP9P0CG40 484 aa4.17□□□□□ -1.74
HERC1-201ENST00000443617 OR9G4Q8NGQ1 327 aa4.17□□□□□ -1.74
HERC1-201ENST00000443617 GP6Q9HCN6 339 aa4.17□□□□□ -1.74
HERC1-201ENST00000443617 IGHV1OR21-1A0A087WYE8 117 aa4.17□□□□□ -1.74
HERC1-201ENST00000443617 C12orf77C9JDV5 145 aa4.17□□□□□ -1.74
HERC1-201ENST00000443617 SLC25A5P05141 298 aaKnown RBP4.17□□□□□ -1.74
HERC1-201ENST00000443617 SSTR5P35346 364 aa4.17□□□□□ -1.74
HERC1-201ENST00000443617 C10orf113Q5VZT2 155 aa4.17□□□□□ -1.74
HERC1-201ENST00000443617 SCRG1O75711 98 aa4.16□□□□□ -1.74
HERC1-201ENST00000443617 PSG7Q13046 419 aa4.16□□□□□ -1.74
HERC1-201ENST00000443617 GDF5OSQ5U4N7 250 aa4.16□□□□□ -1.74
HERC1-201ENST00000443617 HSPE1P61604 102 aaKnown RBP4.16□□□□□ -1.74
HERC1-201ENST00000443617 STXBP6Q8NFX7 210 aa4.16□□□□□ -1.74
HERC1-201ENST00000443617 C1RLQ9NZP8 487 aa4.16□□□□□ -1.74
HERC1-201ENST00000443617 ERHP84090 104 aaKnown RBP4.16□□□□□ -1.74
HERC1-201ENST00000443617 Q6ZPA2 131 aa4.16□□□□□ -1.74
HERC1-201ENST00000443617 PERPQ96FX8 193 aa4.16□□□□□ -1.74
HERC1-201ENST00000443617 CLUHP3Q96NS8 147 aa4.16□□□□□ -1.74
HERC1-201ENST00000443617 FAM208BQ5VWN6 2430 aa4.16□□□□□ -1.74
HERC1-201ENST00000443617 DNPH1O43598 174 aa4.16□□□□□ -1.74
HERC1-201ENST00000443617 Q6ZSR3 168 aa4.16□□□□□ -1.74
HERC1-201ENST00000443617 SNRNP40Q96DI7 357 aaKnown RBP4.16□□□□□ -1.74
HERC1-201ENST00000443617 MCRIP2Q9BUT9 160 aaKnown RBP4.16□□□□□ -1.74
HERC1-201ENST00000443617 TMPRSS3P57727 454 aa4.16□□□□□ -1.74
HERC1-201ENST00000443617 MMP17Q9ULZ9 603 aa4.16□□□□□ -1.74
HERC1-201ENST00000443617 SOX21Q9Y651 276 aaPredicted RBP4.16□□□□□ -1.74
HERC1-201ENST00000443617 PTPN13Q12923 2485 aa4.16□□□□□ -1.74
HERC1-201ENST00000443617 PSG3Q16557 428 aa4.16□□□□□ -1.74
HERC1-201ENST00000443617 LINC00173Q6ZV60 143 aa4.16□□□□□ -1.74
HERC1-201ENST00000443617 SPATA12Q7Z6I5 190 aa4.16□□□□□ -1.74
HERC1-201ENST00000443617 PPP1R35Q8TAP8 253 aa4.16□□□□□ -1.74
HERC1-201ENST00000443617 LINC00479Q96M42 142 aa4.16□□□□□ -1.74
HERC1-201ENST00000443617 R4GN57 208 aa4.16□□□□□ -1.74
HERC1-201ENST00000443617 GAGE12HA6NDE8 117 aa4.16□□□□□ -1.74
HERC1-201ENST00000443617 MC5RP33032 325 aa4.16□□□□□ -1.74
HERC1-201ENST00000443617 TMEM116Q8NCL8 245 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms