RNA–Protein interactions for RNA: ENST00000442830.5

PTPRE-203, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 5

Gene PTPRE, Length 779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-203ENST00000442830 FRAS1Q86XX4 4008 aa10.16□□□□□ -0.78
PTPRE-203ENST00000442830 SMIM31A0A1B0GVY4 71 aa10.16□□□□□ -0.78
PTPRE-203ENST00000442830 ATP6V1G2O95670 118 aa10.16□□□□□ -0.78
PTPRE-203ENST00000442830 HSPE1P61604 102 aaKnown RBP10.16□□□□□ -0.78
PTPRE-203ENST00000442830 NEDD8Q15843 81 aa10.16□□□□□ -0.78
PTPRE-203ENST00000442830 FAM90A2PQ658T7 463 aa10.16□□□□□ -0.78
PTPRE-203ENST00000442830 APRG1Q8IVJ8 170 aa10.16□□□□□ -0.78
PTPRE-203ENST00000442830 DUSP18Q8NEJ0 188 aa10.16□□□□□ -0.78
PTPRE-203ENST00000442830 SEC22AQ96IW7 307 aa10.16□□□□□ -0.78
PTPRE-203ENST00000442830 IGHV3OR16-8A0A075B7F1 116 aa10.15□□□□□ -0.78
PTPRE-203ENST00000442830 A0A1W2PS18 150 aa10.15□□□□□ -0.78
PTPRE-203ENST00000442830 C11orf94C9JXX5 98 aa10.15□□□□□ -0.78
PTPRE-203ENST00000442830 DNASE2O00115 360 aaPredicted RBP10.15□□□□□ -0.78
PTPRE-203ENST00000442830 MT-CO2P00403 227 aa10.15□□□□□ -0.78
PTPRE-203ENST00000442830 RCVRNP35243 200 aa10.15□□□□□ -0.78
PTPRE-203ENST00000442830 SUB1P53999 127 aaKnown RBP eCLIP10.15□□□□□ -0.78
PTPRE-203ENST00000442830 TMEM187Q14656 261 aa10.15□□□□□ -0.78
PTPRE-203ENST00000442830 PHLDA2Q53GA4 152 aa10.15□□□□□ -0.78
PTPRE-203ENST00000442830 ZNF600Q6ZNG1 722 aa10.15□□□□□ -0.78
PTPRE-203ENST00000442830 TCF24Q7RTU0 167 aa10.15□□□□□ -0.78
PTPRE-203ENST00000442830 TBC1D26Q86UD7 250 aa10.15□□□□□ -0.78
PTPRE-203ENST00000442830 OR11H2Q8NH07 326 aa10.15□□□□□ -0.78
PTPRE-203ENST00000442830 ZNF486Q96H40 463 aaPredicted RBP10.15□□□□□ -0.78
PTPRE-203ENST00000442830 NARS2Q96I59 477 aaKnown RBP10.15□□□□□ -0.78
PTPRE-203ENST00000442830 VSIRQ9H7M9 311 aa10.15□□□□□ -0.78
PTPRE-203ENST00000442830 INS-IGF2F8WCM5 200 aa10.14□□□□□ -0.79
PTPRE-203ENST00000442830 ST8SIA3O43173 380 aa10.14□□□□□ -0.79
PTPRE-203ENST00000442830 CA1P00915 261 aaPredicted RBP10.14□□□□□ -0.79
PTPRE-203ENST00000442830 SNCAP37840 140 aa10.14□□□□□ -0.79
PTPRE-203ENST00000442830 TFPI2P48307 235 aa10.14□□□□□ -0.79
PTPRE-203ENST00000442830 CENPSQ8N2Z9 138 aa10.14□□□□□ -0.79
PTPRE-203ENST00000442830 GPX8Q8TED1 209 aa10.14□□□□□ -0.79
PTPRE-203ENST00000442830 C2CD4CQ8TF44 421 aa10.14□□□□□ -0.79
PTPRE-203ENST00000442830 PDCD10Q9BUL8 212 aa10.14□□□□□ -0.79
PTPRE-203ENST00000442830 HRH4Q9H3N8 390 aa10.14□□□□□ -0.79
PTPRE-203ENST00000442830 APOA1P02647 267 aa10.13□□□□□ -0.79
PTPRE-203ENST00000442830 HLA-DMAP28067 261 aa10.13□□□□□ -0.79
PTPRE-203ENST00000442830 EIF2B2P49770 351 aaKnown RBP10.13□□□□□ -0.79
PTPRE-203ENST00000442830 RND3P61587 244 aa10.13□□□□□ -0.79
PTPRE-203ENST00000442830 MORN3Q6PF18 240 aaPredicted RBP10.13□□□□□ -0.79
PTPRE-203ENST00000442830 STHQ8IWL8 128 aa10.13□□□□□ -0.79
PTPRE-203ENST00000442830 SLC35G3Q8N808 338 aa10.13□□□□□ -0.79
PTPRE-203ENST00000442830 PINX1Q96BK5 328 aaKnown RBP10.13□□□□□ -0.79
PTPRE-203ENST00000442830 FBXL17Q9UF56 701 aa10.13□□□□□ -0.79
PTPRE-203ENST00000442830 IGKV3-7A0A075B6H7 116 aa10.12□□□□□ -0.79
PTPRE-203ENST00000442830 DBX1A6NMT0 343 aa10.12□□□□□ -0.79
PTPRE-203ENST00000442830 B3GALNT1O75752 331 aa10.12□□□□□ -0.79
PTPRE-203ENST00000442830 SPP1P10451 314 aa10.12□□□□□ -0.79
PTPRE-203ENST00000442830 RPS19P39019 145 aaKnown RBP10.12□□□□□ -0.79
PTPRE-203ENST00000442830 TOMM20LQ6UXN7 152 aa10.12□□□□□ -0.79
PTPRE-203ENST00000442830 LYSMD2Q8IV50 215 aa10.12□□□□□ -0.79
PTPRE-203ENST00000442830 MRGPRFQ96AM1 343 aa10.12□□□□□ -0.79
PTPRE-203ENST00000442830 GRAMD2BQ96HH9 432 aa10.12□□□□□ -0.79
PTPRE-203ENST00000442830 MS4A6AQ9H2W1 248 aa10.12□□□□□ -0.79
PTPRE-203ENST00000442830 ENY2Q9NPA8 101 aa10.12□□□□□ -0.79
PTPRE-203ENST00000442830 TBPP20226 339 aa10.11□□□□□ -0.79
PTPRE-203ENST00000442830 NPPCP23582 126 aa10.11□□□□□ -0.79
PTPRE-203ENST00000442830 AKR1C2P52895 323 aa10.11□□□□□ -0.79
PTPRE-203ENST00000442830 RPL11P62913 178 aaKnown RBP10.11□□□□□ -0.79
PTPRE-203ENST00000442830 GBGT1Q8N5D6 347 aa10.11□□□□□ -0.79
PTPRE-203ENST00000442830 RPP25LQ8N5L8 163 aaKnown RBP10.11□□□□□ -0.79
PTPRE-203ENST00000442830 ST8SIA2Q92186 375 aa10.11□□□□□ -0.79
PTPRE-203ENST00000442830 ZNF414Q96IQ9 312 aa10.11□□□□□ -0.79
PTPRE-203ENST00000442830 METTL26Q96S19 204 aa10.11□□□□□ -0.79
PTPRE-203ENST00000442830 PUS1Q9Y606 427 aaKnown RBP eCLIP10.11□□□□□ -0.792e-6■■■■■ 28.9
PTPRE-203ENST00000442830 TRAV30A0A087WSZ9 112 aa10.1□□□□□ -0.79
PTPRE-203ENST00000442830 A0A087WXM4 84 aa10.1□□□□□ -0.79
PTPRE-203ENST00000442830 IGHV3-49A0A0A0MS15 119 aa10.1□□□□□ -0.79
PTPRE-203ENST00000442830 IFNA17P01571 189 aa10.1□□□□□ -0.79
PTPRE-203ENST00000442830 MIFP14174 115 aa10.1□□□□□ -0.79
PTPRE-203ENST00000442830 RPL5P46777 297 aaKnown RBP10.1□□□□□ -0.79
PTPRE-203ENST00000442830 DEFB131AP59861 70 aa10.1□□□□□ -0.79
PTPRE-203ENST00000442830 NANOS2P60321 138 aaKnown RBP10.1□□□□□ -0.79
PTPRE-203ENST00000442830 ARRDC1Q8N5I2 433 aa10.1□□□□□ -0.79
PTPRE-203ENST00000442830 CCDC71LQ8N9Z2 235 aa10.1□□□□□ -0.79
PTPRE-203ENST00000442830 C15orf40Q8WUR7 153 aa10.1□□□□□ -0.79
PTPRE-203ENST00000442830 CACFD1Q9UGQ2 172 aa10.1□□□□□ -0.79
PTPRE-203ENST00000442830 RPS10-NUDT3A0A1W2PQS6 291 aa10.09□□□□□ -0.79
PTPRE-203ENST00000442830 TMEM50AO95807 157 aa10.09□□□□□ -0.79
PTPRE-203ENST00000442830 IGKV1-39P01597 117 aa10.09□□□□□ -0.79
PTPRE-203ENST00000442830 IGKV1D-39P04432 117 aa10.09□□□□□ -0.79
PTPRE-203ENST00000442830 PGAM2P15259 253 aa10.09□□□□□ -0.79
PTPRE-203ENST00000442830 ZNF124Q15973 351 aa10.09□□□□□ -0.79
PTPRE-203ENST00000442830 RNASE10Q5GAN6 216 aaKnown RBP10.09□□□□□ -0.79
PTPRE-203ENST00000442830 PVRIGQ6DKI7 326 aa10.09□□□□□ -0.79
PTPRE-203ENST00000442830 MZT2AQ6P582 158 aa10.09□□□□□ -0.79
PTPRE-203ENST00000442830 ZFAND1Q8TCF1 268 aa10.09□□□□□ -0.79
PTPRE-203ENST00000442830 YIPF6Q96EC8 236 aa10.09□□□□□ -0.79
PTPRE-203ENST00000442830 RRNAD1Q96FB5 475 aaKnown RBP10.09□□□□□ -0.79
PTPRE-203ENST00000442830 ZFAND3Q9H8U3 227 aa10.09□□□□□ -0.79
PTPRE-203ENST00000442830 RABAC1Q9UI14 185 aa10.09□□□□□ -0.79
PTPRE-203ENST00000442830 IGHV3OR16-13A0A075B7E8 117 aa10.08□□□□□ -0.8
PTPRE-203ENST00000442830 IGHV3-74A0A0B4J1X5 117 aa10.08□□□□□ -0.8
PTPRE-203ENST00000442830 CLN5O75503 358 aa10.08□□□□□ -0.8
PTPRE-203ENST00000442830 DEDDO75618 318 aa10.08□□□□□ -0.8
PTPRE-203ENST00000442830 TNFAIP8O95379 198 aa10.08□□□□□ -0.8
PTPRE-203ENST00000442830 CRYBB3P26998 211 aa10.08□□□□□ -0.8
PTPRE-203ENST00000442830 OPRK1P41145 380 aa10.08□□□□□ -0.8
PTPRE-203ENST00000442830 HOXA1P49639 335 aaPredicted RBP10.08□□□□□ -0.8
PTPRE-203ENST00000442830 AP2S1P53680 142 aaPredicted RBP10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms