RNA–Protein interactions for RNA: ENST00000442216.1

CSNK1E-210, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 787 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-210ENST00000442216 SCARB1Q8WTV0 552 aa11.5□□□□□ -0.57
CSNK1E-210ENST00000442216 OR4C12Q96R67 309 aa11.5□□□□□ -0.57
CSNK1E-210ENST00000442216 TXN2Q99757 166 aa11.5□□□□□ -0.57
CSNK1E-210ENST00000442216 AURKAIP1Q9NWT8 199 aaPredicted RBP11.5□□□□□ -0.57
CSNK1E-210ENST00000442216 C21orf62Q9NYP8 219 aa11.5□□□□□ -0.57
CSNK1E-210ENST00000442216 SIGLEC8Q9NYZ4 499 aa11.5□□□□□ -0.57
CSNK1E-210ENST00000442216 FLVCR2Q9UPI3 526 aa11.5□□□□□ -0.57
CSNK1E-210ENST00000442216 PPP5D1E7EU14 171 aa11.49□□□□□ -0.57
CSNK1E-210ENST00000442216 UPK1BO75841 260 aa11.49□□□□□ -0.57
CSNK1E-210ENST00000442216 IGHV3-23P01764 117 aa11.49□□□□□ -0.57
CSNK1E-210ENST00000442216 HLA-AP01891 365 aaKnown RBP11.49□□□□□ -0.57
CSNK1E-210ENST00000442216 TCRBP04435 133 aa11.49□□□□□ -0.57
CSNK1E-210ENST00000442216 DHRS2Q13268 280 aa11.49□□□□□ -0.57
CSNK1E-210ENST00000442216 ASAH1Q13510 395 aa11.49□□□□□ -0.57
CSNK1E-210ENST00000442216 BSXQ3C1V8 233 aa11.49□□□□□ -0.57
CSNK1E-210ENST00000442216 SPINK9Q5DT21 86 aa11.49□□□□□ -0.57
CSNK1E-210ENST00000442216 MZT2BQ6NZ67 158 aa11.49□□□□□ -0.57
CSNK1E-210ENST00000442216 SPSB3Q6PJ21 355 aa11.49□□□□□ -0.57
CSNK1E-210ENST00000442216 LYG2Q86SG7 212 aa11.49□□□□□ -0.57
CSNK1E-210ENST00000442216 BSCL2Q96G97 398 aaPredicted RBP11.49□□□□□ -0.57
CSNK1E-210ENST00000442216 C20orf85Q9H1P6 137 aa11.49□□□□□ -0.57
CSNK1E-210ENST00000442216 HSPB7Q9UBY9 170 aa11.49□□□□□ -0.57
CSNK1E-210ENST00000442216 S4R3C0 116 aa11.49□□□□□ -0.57
CSNK1E-210ENST00000442216 I3L2K1 104 aa11.48□□□□□ -0.57
CSNK1E-210ENST00000442216 TGOLN2O43493 480 aa11.48□□□□□ -0.57
CSNK1E-210ENST00000442216 PITX3O75364 302 aa11.48□□□□□ -0.57
CSNK1E-210ENST00000442216 RNASE2P10153 161 aaKnown RBP11.48□□□□□ -0.57
CSNK1E-210ENST00000442216 HTR2BP41595 481 aa11.48□□□□□ -0.57
CSNK1E-210ENST00000442216 TNFRSF9Q07011 255 aa11.48□□□□□ -0.57
CSNK1E-210ENST00000442216 FAM106AQ4KMX7 169 aa11.48□□□□□ -0.57
CSNK1E-210ENST00000442216 PLET1Q6UQ28 207 aa11.48□□□□□ -0.57
CSNK1E-210ENST00000442216 COQ8AQ8NI60 647 aa11.48□□□□□ -0.57
CSNK1E-210ENST00000442216 MISP3Q96FF7 219 aa11.48□□□□□ -0.57
CSNK1E-210ENST00000442216 HIPK2Q9H2X6 1198 aa11.48□□□□□ -0.57
CSNK1E-210ENST00000442216 MEGF8Q7Z7M0 2845 aa11.48□□□□□ -0.57
CSNK1E-210ENST00000442216 CEBPZOSA8MTT3 80 aa11.47□□□□□ -0.57
CSNK1E-210ENST00000442216 FAM90A26D6RGX4 464 aa11.47□□□□□ -0.57
CSNK1E-210ENST00000442216 OR2C1O95371 312 aa11.47□□□□□ -0.57
CSNK1E-210ENST00000442216 ANXA7P20073 488 aaKnown RBP11.47□□□□□ -0.57
CSNK1E-210ENST00000442216 GPR183P32249 361 aa11.47□□□□□ -0.57
CSNK1E-210ENST00000442216 C4orf46Q504U0 113 aa11.47□□□□□ -0.57
CSNK1E-210ENST00000442216 C2orf83Q53S99 150 aa11.47□□□□□ -0.57
CSNK1E-210ENST00000442216 IL34Q6ZMJ4 242 aa11.47□□□□□ -0.57
CSNK1E-210ENST00000442216 NOXA1Q86UR1 476 aa11.47□□□□□ -0.57
CSNK1E-210ENST00000442216 OR1S1Q8NH92 325 aa11.47□□□□□ -0.57
CSNK1E-210ENST00000442216 HEYLQ9NQ87 328 aaPredicted RBP11.47□□□□□ -0.57
CSNK1E-210ENST00000442216 TBC1D24Q9ULP9 559 aa11.47□□□□□ -0.57
CSNK1E-210ENST00000442216 FAM240BA0A1B0GVZ2 78 aa11.46□□□□□ -0.57
CSNK1E-210ENST00000442216 A8MWP6 167 aa11.46□□□□□ -0.57
CSNK1E-210ENST00000442216 F8W735 103 aaPredicted RBP11.46□□□□□ -0.57
CSNK1E-210ENST00000442216 MT-CO2P00403 227 aa11.46□□□□□ -0.57
CSNK1E-210ENST00000442216 IGLV1-51P01701 117 aa11.46□□□□□ -0.57
CSNK1E-210ENST00000442216 CSN3P07498 182 aa11.46□□□□□ -0.57
CSNK1E-210ENST00000442216 MFAP4P55083 255 aa11.46□□□□□ -0.57
CSNK1E-210ENST00000442216 ATP5IP56385 69 aaPredicted RBP11.46□□□□□ -0.57
CSNK1E-210ENST00000442216 GGNBP1Q5YKI7 109 aa11.46□□□□□ -0.57
CSNK1E-210ENST00000442216 ZNF436Q9C0F3 470 aaPredicted RBP11.46□□□□□ -0.57
CSNK1E-210ENST00000442216 ZNF256Q9Y2P7 627 aaPredicted RBP11.46□□□□□ -0.57
CSNK1E-210ENST00000442216 U3KQ87 197 aa11.46□□□□□ -0.57
CSNK1E-210ENST00000442216 IGHV3-21A0A0B4J1V1 117 aa11.45□□□□□ -0.58
CSNK1E-210ENST00000442216 OR2T8A6NH00 312 aa11.45□□□□□ -0.58
CSNK1E-210ENST00000442216 MED6O75586 246 aa11.45□□□□□ -0.58
CSNK1E-210ENST00000442216 PRB2P02812 416 aaPredicted RBP11.45□□□□□ -0.58
CSNK1E-210ENST00000442216 HOXB5P09067 269 aa11.45□□□□□ -0.58
CSNK1E-210ENST00000442216 ELLP55199 621 aaPredicted RBP11.45□□□□□ -0.58
CSNK1E-210ENST00000442216 DCTN2Q13561 401 aaKnown RBP11.45□□□□□ -0.58
CSNK1E-210ENST00000442216 Q56UQ5 140 aa11.45□□□□□ -0.58
CSNK1E-210ENST00000442216 DUSP18Q8NEJ0 188 aa11.45□□□□□ -0.58
CSNK1E-210ENST00000442216 SLC24A4Q8NFF2 622 aa11.45□□□□□ -0.58
CSNK1E-210ENST00000442216 OR2K2Q8NGT1 345 aa11.45□□□□□ -0.58
CSNK1E-210ENST00000442216 DTD1Q8TEA8 209 aa11.45□□□□□ -0.58
CSNK1E-210ENST00000442216 MITD1Q8WV92 249 aa11.45□□□□□ -0.58
CSNK1E-210ENST00000442216 PINX1Q96BK5 328 aaKnown RBP11.45□□□□□ -0.58
CSNK1E-210ENST00000442216 PALMDQ9NP74 551 aa11.45□□□□□ -0.58
CSNK1E-210ENST00000442216 NUDT15Q9NV35 164 aa11.45□□□□□ -0.58
CSNK1E-210ENST00000442216 NDUFA4O00483 81 aa11.44□□□□□ -0.58
CSNK1E-210ENST00000442216 IFNA21P01568 189 aa11.44□□□□□ -0.58
CSNK1E-210ENST00000442216 CTSGP08311 255 aa11.44□□□□□ -0.58
CSNK1E-210ENST00000442216 H2AFB2P0C5Z0 115 aa11.44□□□□□ -0.58
CSNK1E-210ENST00000442216 NPBWR1P48145 328 aa11.44□□□□□ -0.58
CSNK1E-210ENST00000442216 UBAC2Q8NBM4 344 aa11.44□□□□□ -0.58
CSNK1E-210ENST00000442216 MRAPQ8TCY5 172 aa11.44□□□□□ -0.58
CSNK1E-210ENST00000442216 RNASEH2CQ8TDP1 164 aaKnown RBP11.44□□□□□ -0.58
CSNK1E-210ENST00000442216 RBKSQ9H477 322 aa11.44□□□□□ -0.58
CSNK1E-210ENST00000442216 TRAV6A0A075B6T7 132 aa11.43□□□□□ -0.58
CSNK1E-210ENST00000442216 RPS10-NUDT3A0A1W2PQS6 291 aa11.43□□□□□ -0.58
CSNK1E-210ENST00000442216 WI2-2373I1.2A0A1W2PRP0 233 aa11.43□□□□□ -0.58
CSNK1E-210ENST00000442216 C2orf70A6NJV1 201 aa11.43□□□□□ -0.58
CSNK1E-210ENST00000442216 K7EIL1 84 aa11.43□□□□□ -0.58
CSNK1E-210ENST00000442216 NUPL2O15504 423 aaKnown RBP11.43□□□□□ -0.58
CSNK1E-210ENST00000442216 GNG7O60262 68 aa11.43□□□□□ -0.58
CSNK1E-210ENST00000442216 NXPH3O95157 252 aa11.43□□□□□ -0.58
CSNK1E-210ENST00000442216 LY86O95711 162 aa11.43□□□□□ -0.58
CSNK1E-210ENST00000442216 NPY1RP25929 384 aa11.43□□□□□ -0.58
CSNK1E-210ENST00000442216 ADMP35318 185 aa11.43□□□□□ -0.58
CSNK1E-210ENST00000442216 IFITM3Q01628 133 aa11.43□□□□□ -0.58
CSNK1E-210ENST00000442216 RELQ04864 619 aaPredicted RBP11.43□□□□□ -0.58
CSNK1E-210ENST00000442216 MARC2Q969Z3 335 aa11.43□□□□□ -0.58
CSNK1E-210ENST00000442216 CHRDL1Q9BU40 450 aa11.43□□□□□ -0.58
CSNK1E-210ENST00000442216 UFC1Q9Y3C8 167 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms