RNA–Protein interactions for RNA: ENST00000442201.6

CCDC39-201, Transcript of coiled-coil domain containing 39, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC39, Length 3,279 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-201ENST00000442201 PERPQ96FX8 193 aa6.58□□□□□ -1.36
CCDC39-201ENST00000442201 ZNRD1Q9P1U0 126 aa6.58□□□□□ -1.36
CCDC39-201ENST00000442201 USP9YO00507 2555 aaPredicted RBP6.58□□□□□ -1.36
CCDC39-201ENST00000442201 SPG11Q96JI7 2443 aa6.58□□□□□ -1.36
CCDC39-201ENST00000442201 FCGR3BO75015 233 aa6.58□□□□□ -1.36
CCDC39-201ENST00000442201 KIR2DS2P43631 304 aa6.58□□□□□ -1.36
CCDC39-201ENST00000442201 BRWD1-AS2P59051 145 aa6.58□□□□□ -1.36
CCDC39-201ENST00000442201 LMO4P61968 165 aa6.58□□□□□ -1.36
CCDC39-201ENST00000442201 MMDQ15546 238 aa6.58□□□□□ -1.36
CCDC39-201ENST00000442201 BATFQ16520 125 aa6.58□□□□□ -1.36
CCDC39-201ENST00000442201 ZNF596Q8TC21 504 aa6.58□□□□□ -1.36
CCDC39-201ENST00000442201 C10orf105Q8TEF2 133 aa6.58□□□□□ -1.36
CCDC39-201ENST00000442201 URGCP-MRPS24S4R325 110 aa6.58□□□□□ -1.36
CCDC39-201ENST00000442201 A0A1B0GU03 582 aa6.57□□□□□ -1.36
CCDC39-201ENST00000442201 M0R1W7 72 aa6.57□□□□□ -1.36
CCDC39-201ENST00000442201 ST8SIA3O43173 380 aa6.57□□□□□ -1.36
CCDC39-201ENST00000442201 RBFOX2O43251 390 aaKnown RBP eCLIP6.57□□□□□ -1.36
CCDC39-201ENST00000442201 ENSAO43768 121 aaKnown RBP6.57□□□□□ -1.36
CCDC39-201ENST00000442201 S1PR2O95136 353 aa6.57□□□□□ -1.36
CCDC39-201ENST00000442201 KRASP01116 189 aa6.57□□□□□ -1.36
CCDC39-201ENST00000442201 IGKV1-5P01602 117 aa6.57□□□□□ -1.36
CCDC39-201ENST00000442201 SRP19P09132 144 aaKnown RBP6.57□□□□□ -1.36
CCDC39-201ENST00000442201 SLC25A6P12236 298 aa6.57□□□□□ -1.36
CCDC39-201ENST00000442201 C1orf229Q6ZS94 237 aaPredicted RBP6.57□□□□□ -1.36
CCDC39-201ENST00000442201 OR10G4Q8NGN3 311 aa6.57□□□□□ -1.36
CCDC39-201ENST00000442201 CLEC7AQ9BXN2 247 aa6.57□□□□□ -1.36
CCDC39-201ENST00000442201 LAMTOR2Q9Y2Q5 125 aa6.57□□□□□ -1.36
CCDC39-201ENST00000442201 DSCAML1Q8TD84 2053 aa6.57□□□□□ -1.36
CCDC39-201ENST00000442201 IGHV2-26A0A0B4J1V2 119 aa6.57□□□□□ -1.36
CCDC39-201ENST00000442201 A0A0G2JRQ6 117 aa6.57□□□□□ -1.36
CCDC39-201ENST00000442201 CLDN34H7C241 214 aa6.57□□□□□ -1.36
CCDC39-201ENST00000442201 IL3RAP26951 378 aa6.57□□□□□ -1.36
CCDC39-201ENST00000442201 NKX2-1P43699 371 aaPredicted RBP6.57□□□□□ -1.36
CCDC39-201ENST00000442201 SAMD13Q5VXD3 122 aa6.57□□□□□ -1.36
CCDC39-201ENST00000442201 PRR27Q6MZM9 219 aa6.57□□□□□ -1.36
CCDC39-201ENST00000442201 ZNF833PQ6ZTB9 187 aa6.57□□□□□ -1.36
CCDC39-201ENST00000442201 FAM219AQ8IW50 185 aa6.57□□□□□ -1.36
CCDC39-201ENST00000442201 TMEM186Q96B77 213 aa6.57□□□□□ -1.36
CCDC39-201ENST00000442201 ATP6V0BQ99437 205 aa6.57□□□□□ -1.36
CCDC39-201ENST00000442201 LSM5Q9Y4Y9 91 aaKnown RBP6.57□□□□□ -1.36
CCDC39-201ENST00000442201 KIAA1324LA8MWY0 1029 aaPredicted RBP6.56□□□□□ -1.36
CCDC39-201ENST00000442201 G3V4G9 280 aa6.56□□□□□ -1.36
CCDC39-201ENST00000442201 ZFP36P26651 326 aaKnown RBP6.56□□□□□ -1.36
CCDC39-201ENST00000442201 DSCR9P59020 149 aa6.56□□□□□ -1.36
CCDC39-201ENST00000442201 OR4A47Q6IF82 309 aa6.56□□□□□ -1.36
CCDC39-201ENST00000442201 SHISA2Q6UWI4 295 aa6.56□□□□□ -1.36
CCDC39-201ENST00000442201 OR10W1Q8NGF6 305 aa6.56□□□□□ -1.36
CCDC39-201ENST00000442201 DDB2Q92466 427 aa6.56□□□□□ -1.36
CCDC39-201ENST00000442201 MEGF9Q9H1U4 602 aa6.56□□□□□ -1.36
CCDC39-201ENST00000442201 UTP20O75691 2785 aaKnown RBP6.56□□□□□ -1.36
CCDC39-201ENST00000442201 ZNF320A2RRD8 509 aa6.56□□□□□ -1.36
CCDC39-201ENST00000442201 FOXH1O75593 365 aa6.56□□□□□ -1.36
CCDC39-201ENST00000442201 COX7A1P24310 79 aa6.56□□□□□ -1.36
CCDC39-201ENST00000442201 G6PCP35575 357 aa6.56□□□□□ -1.36
CCDC39-201ENST00000442201 LCN2P80188 198 aa6.56□□□□□ -1.36
CCDC39-201ENST00000442201 IZUMO4Q1ZYL8 232 aa6.56□□□□□ -1.36
CCDC39-201ENST00000442201 FAM71F2Q6NXP2 309 aa6.56□□□□□ -1.36
CCDC39-201ENST00000442201 KIR3DL3Q8N743 410 aa6.56□□□□□ -1.36
CCDC39-201ENST00000442201 CACNG5Q9UF02 275 aa6.56□□□□□ -1.36
CCDC39-201ENST00000442201 DEDDO75618 318 aa6.56□□□□□ -1.36
CCDC39-201ENST00000442201 IGLV1-47P01700 117 aa6.56□□□□□ -1.36
CCDC39-201ENST00000442201 CT45A6P0DMU7 189 aa6.56□□□□□ -1.36
CCDC39-201ENST00000442201 CT45A5P0DMU8 189 aa6.56□□□□□ -1.36
CCDC39-201ENST00000442201 CT45A7P0DMV0 189 aa6.56□□□□□ -1.36
CCDC39-201ENST00000442201 PRTN3P24158 256 aa6.56□□□□□ -1.36
CCDC39-201ENST00000442201 ZNF137PP52743 207 aa6.56□□□□□ -1.36
CCDC39-201ENST00000442201 DLX1P56177 255 aa6.56□□□□□ -1.36
CCDC39-201ENST00000442201 ACTL10Q5JWF8 245 aa6.56□□□□□ -1.36
CCDC39-201ENST00000442201 ZNF429Q86V71 674 aa6.56□□□□□ -1.36
CCDC39-201ENST00000442201 Q8N7P7 452 aa6.56□□□□□ -1.36
CCDC39-201ENST00000442201 PSMG3-AS1Q96PY0 264 aa6.56□□□□□ -1.36
CCDC39-201ENST00000442201 VWC2LB2RUY7 222 aa6.55□□□□□ -1.36
CCDC39-201ENST00000442201 APOA2P02652 100 aa6.55□□□□□ -1.36
CCDC39-201ENST00000442201 CRYBA4P53673 196 aa6.55□□□□□ -1.36
CCDC39-201ENST00000442201 ERVK-16P61578 105 aa6.55□□□□□ -1.36
CCDC39-201ENST00000442201 ID3Q02535 119 aa6.55□□□□□ -1.36
CCDC39-201ENST00000442201 PAX2Q02962 417 aa6.55□□□□□ -1.36
CCDC39-201ENST00000442201 PNRC1Q12796 327 aaPredicted RBP6.55□□□□□ -1.36
CCDC39-201ENST00000442201 RTL8BQ17RB0 113 aa6.55□□□□□ -1.36
CCDC39-201ENST00000442201 HLA-DRB5Q30154 266 aa6.55□□□□□ -1.36
CCDC39-201ENST00000442201 CXorf66Q5JRM2 361 aaPredicted RBP6.55□□□□□ -1.36
CCDC39-201ENST00000442201 Q6ZRM9 215 aa6.55□□□□□ -1.36
CCDC39-201ENST00000442201 H2BFWTQ7Z2G1 175 aa6.55□□□□□ -1.36
CCDC39-201ENST00000442201 TMEM144Q7Z5S9 345 aa6.55□□□□□ -1.36
CCDC39-201ENST00000442201 ST6GALNAC6Q969X2 333 aa6.55□□□□□ -1.36
CCDC39-201ENST00000442201 MRPL20Q9BYC9 149 aaKnown RBP6.55□□□□□ -1.36
CCDC39-201ENST00000442201 CTDSP1Q9GZU7 261 aa6.55□□□□□ -1.36
CCDC39-201ENST00000442201 SLC35D1Q9NTN3 355 aa6.55□□□□□ -1.36
CCDC39-201ENST00000442201 MRPS16Q9Y3D3 137 aaKnown RBP6.55□□□□□ -1.36
CCDC39-201ENST00000442201 AMMECR1Q9Y4X0 333 aaPredicted RBP6.55□□□□□ -1.36
CCDC39-201ENST00000442201 IGHV4-30-2A0A087WSY4 118 aa6.55□□□□□ -1.36
CCDC39-201ENST00000442201 IGHV4-61A0A0C4DH41 118 aa6.55□□□□□ -1.36
CCDC39-201ENST00000442201 E5RGE8 158 aa6.55□□□□□ -1.36
CCDC39-201ENST00000442201 HAX1O00165 279 aa6.55□□□□□ -1.36
CCDC39-201ENST00000442201 PITX3O75364 302 aa6.55□□□□□ -1.36
CCDC39-201ENST00000442201 HSPB1P04792 205 aaKnown RBP6.55□□□□□ -1.36
CCDC39-201ENST00000442201 REG1BP48304 166 aa6.55□□□□□ -1.36
CCDC39-201ENST00000442201 RIPPLY3P57055 190 aa6.55□□□□□ -1.36
CCDC39-201ENST00000442201 KRTAP10-9P60411 292 aa6.55□□□□□ -1.36
CCDC39-201ENST00000442201 RAB11AP62491 216 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms