RNA–Protein interactions for RNA: ENST00000440048.1

VARS-217, Transcript of valyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene VARS, Length 804 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-217ENST00000440048 HOXA1P49639 335 aaPredicted RBP17.89■□□□□ 0.45
VARS-217ENST00000440048 BAK1Q16611 211 aa17.89■□□□□ 0.45
VARS-217ENST00000440048 DEFB114Q30KQ6 69 aa17.89■□□□□ 0.45
VARS-217ENST00000440048 CD300EQ496F6 205 aaPredicted RBP17.89■□□□□ 0.45
VARS-217ENST00000440048 Q56UQ5 140 aa17.89■□□□□ 0.45
VARS-217ENST00000440048 SPSB3Q6PJ21 355 aa17.89■□□□□ 0.45
VARS-217ENST00000440048 UBAC2Q8NBM4 344 aa17.89■□□□□ 0.45
VARS-217ENST00000440048 CACNG8Q8WXS5 425 aa17.89■□□□□ 0.45
VARS-217ENST00000440048 CHRDL1Q9BU40 450 aa17.89■□□□□ 0.45
VARS-217ENST00000440048 ZNF436Q9C0F3 470 aaPredicted RBP17.89■□□□□ 0.45
VARS-217ENST00000440048 CACNG5Q9UF02 275 aa17.89■□□□□ 0.45
VARS-217ENST00000440048 MT-CO2P00403 227 aa17.88■□□□□ 0.45
VARS-217ENST00000440048 SNCAP37840 140 aa17.88■□□□□ 0.45
VARS-217ENST00000440048 SPCS3P61009 180 aa17.88■□□□□ 0.45
VARS-217ENST00000440048 TM4SF20Q53R12 229 aa17.88■□□□□ 0.45
VARS-217ENST00000440048 C11orf87Q6NUJ2 197 aa17.88■□□□□ 0.45
VARS-217ENST00000440048 TMED4Q7Z7H5 227 aa17.88■□□□□ 0.45
VARS-217ENST00000440048 SDHCQ99643 169 aaPredicted RBP17.88■□□□□ 0.45
VARS-217ENST00000440048 SLC25A21Q9BQT8 299 aaPredicted RBP17.88■□□□□ 0.45
VARS-217ENST00000440048 PALMDQ9NP74 551 aa17.88■□□□□ 0.45
VARS-217ENST00000440048 ENY2Q9NPA8 101 aa17.88■□□□□ 0.45
VARS-217ENST00000440048 IGHV3-48P01763 117 aa17.87■□□□□ 0.45
VARS-217ENST00000440048 NHLRC4P0CG21 123 aaPredicted RBP17.87■□□□□ 0.45
VARS-217ENST00000440048 ADMP35318 185 aa17.87■□□□□ 0.45
VARS-217ENST00000440048 OR52E5Q8NH55 327 aa17.87■□□□□ 0.45
VARS-217ENST00000440048 PINX1Q96BK5 328 aaKnown RBP17.87■□□□□ 0.45
VARS-217ENST00000440048 ASCL2Q99929 193 aa17.87■□□□□ 0.45
VARS-217ENST00000440048 TECRQ9NZ01 308 aaKnown RBP17.87■□□□□ 0.45
VARS-217ENST00000440048 RNASE2P10153 161 aaKnown RBP17.86■□□□□ 0.45
VARS-217ENST00000440048 ANXA3P12429 323 aa17.86■□□□□ 0.45
VARS-217ENST00000440048 MFAP4P55083 255 aa17.86■□□□□ 0.45
VARS-217ENST00000440048 TRIQKQ629K1 86 aa17.86■□□□□ 0.45
VARS-217ENST00000440048 PVRIGQ6DKI7 326 aa17.86■□□□□ 0.45
VARS-217ENST00000440048 UXS1Q8NBZ7 420 aa17.86■□□□□ 0.45
VARS-217ENST00000440048 GAR1Q9NY12 217 aaKnown RBP17.86■□□□□ 0.45
VARS-217ENST00000440048 CTSGP08311 255 aa17.85■□□□□ 0.45
VARS-217ENST00000440048 FCGR2BP31994 310 aaPredicted RBP17.85■□□□□ 0.45
VARS-217ENST00000440048 INPP1P49441 399 aa17.85■□□□□ 0.45
VARS-217ENST00000440048 SUB1P53999 127 aaKnown RBP eCLIP17.85■□□□□ 0.45
VARS-217ENST00000440048 ELLP55199 621 aaPredicted RBP17.85■□□□□ 0.45
VARS-217ENST00000440048 TMEM128Q5BJH2 165 aa17.85■□□□□ 0.45
VARS-217ENST00000440048 LYZL2Q7Z4W2 148 aa17.85■□□□□ 0.45
VARS-217ENST00000440048 LGI3Q8N145 548 aa17.85■□□□□ 0.45
VARS-217ENST00000440048 TMEM190Q8WZ59 177 aa17.85■□□□□ 0.45
VARS-217ENST00000440048 TXN2Q99757 166 aa17.85■□□□□ 0.45
VARS-217ENST00000440048 UFC1Q9Y3C8 167 aa17.85■□□□□ 0.45
VARS-217ENST00000440048 SELENOKQ9Y6D0 94 aa17.85■□□□□ 0.45
VARS-217ENST00000440048 A0A0B4J2A0 478 aa17.84■□□□□ 0.45
VARS-217ENST00000440048 ZNF785A8K8V0 405 aa17.84■□□□□ 0.45
VARS-217ENST00000440048 NDUFA4O00483 81 aa17.84■□□□□ 0.45
VARS-217ENST00000440048 FRMD6-AS1P0C7T7 363 aa17.84■□□□□ 0.45
VARS-217ENST00000440048 C8orf88P0DMB2 117 aa17.84■□□□□ 0.45
VARS-217ENST00000440048 SULT1A3P0DMM9 295 aa17.84■□□□□ 0.45
VARS-217ENST00000440048 SULT1A4P0DMN0 295 aa17.84■□□□□ 0.45
VARS-217ENST00000440048 SRPXP78539 464 aa17.84■□□□□ 0.45
VARS-217ENST00000440048 MLXQ9UH92 298 aa17.84■□□□□ 0.45
VARS-217ENST00000440048 SHPKQ9UHJ6 478 aa17.84■□□□□ 0.45
VARS-217ENST00000440048 IGHV4-30-4P0DP06 118 aa17.83■□□□□ 0.44
VARS-217ENST00000440048 CCR6P51684 374 aa17.83■□□□□ 0.44
VARS-217ENST00000440048 BSXQ3C1V8 233 aa17.83■□□□□ 0.44
VARS-217ENST00000440048 NMSQ5H8A3 153 aa17.83■□□□□ 0.44
VARS-217ENST00000440048 GTSCR1Q86UQ5 136 aa17.83■□□□□ 0.44
VARS-217ENST00000440048 MARC2Q969Z3 335 aa17.83■□□□□ 0.44
VARS-217ENST00000440048 ZNF414Q96IQ9 312 aa17.83■□□□□ 0.44
VARS-217ENST00000440048 STAB2Q8WWQ8 2551 aa17.82■□□□□ 0.44
VARS-217ENST00000440048 NAP1L6A6NFF2 107 aa17.82■□□□□ 0.44
VARS-217ENST00000440048 NUPL2O15504 423 aaKnown RBP17.82■□□□□ 0.44
VARS-217ENST00000440048 RBMS2Q15434 407 aaKnown RBP17.82■□□□□ 0.44
VARS-217ENST00000440048 WDR89Q96FK6 387 aaPredicted RBP17.82■□□□□ 0.44
VARS-217ENST00000440048 HEYLQ9NQ87 328 aaPredicted RBP17.82■□□□□ 0.44
VARS-217ENST00000440048 MRPL27Q9P0M9 148 aaKnown RBP17.82■□□□□ 0.44
VARS-217ENST00000440048 LINC00854A0A1B0GVQ3 168 aa17.81■□□□□ 0.44
VARS-217ENST00000440048 CEBPZOSA8MTT3 80 aa17.81■□□□□ 0.44
VARS-217ENST00000440048 CORTO00230 105 aa17.81■□□□□ 0.44
VARS-217ENST00000440048 NXPH3O95157 252 aa17.81■□□□□ 0.44
VARS-217ENST00000440048 VAMP1P23763 118 aa17.81■□□□□ 0.44
VARS-217ENST00000440048 SMCO1Q147U7 214 aa17.81■□□□□ 0.44
VARS-217ENST00000440048 GUCA2BQ16661 112 aa17.81■□□□□ 0.44
VARS-217ENST00000440048 BTNL8Q6UX41 500 aa17.81■□□□□ 0.44
VARS-217ENST00000440048 SBSPONQ8IVN8 264 aa17.81■□□□□ 0.44
VARS-217ENST00000440048 TMEM61Q8N0U2 210 aa17.81■□□□□ 0.44
VARS-217ENST00000440048 CENPSQ8N2Z9 138 aa17.81■□□□□ 0.44
VARS-217ENST00000440048 C20orf24Q9BUV8 137 aa17.81■□□□□ 0.44
VARS-217ENST00000440048 IGHV3OR16-8A0A075B7F1 116 aa17.8■□□□□ 0.44
VARS-217ENST00000440048 A8MZ25 164 aa17.8■□□□□ 0.44
VARS-217ENST00000440048 GNG7O60262 68 aa17.8■□□□□ 0.44
VARS-217ENST00000440048 IL7P13232 177 aa17.8■□□□□ 0.44
VARS-217ENST00000440048 HTR2BP41595 481 aa17.8■□□□□ 0.44
VARS-217ENST00000440048 RELQ04864 619 aaPredicted RBP17.8■□□□□ 0.44
VARS-217ENST00000440048 PPP1R1AQ13522 171 aa17.8■□□□□ 0.44
VARS-217ENST00000440048 ANKRD55Q3KP44 614 aa17.8■□□□□ 0.44
VARS-217ENST00000440048 DUSP18Q8NEJ0 188 aa17.8■□□□□ 0.44
VARS-217ENST00000440048 DAZ1Q9NQZ3 744 aaKnown RBP17.8■□□□□ 0.44
VARS-217ENST00000440048 C19orf73Q9NVV2 129 aa17.8■□□□□ 0.44
VARS-217ENST00000440048 CACFD1Q9UGQ2 172 aa17.8■□□□□ 0.44
VARS-217ENST00000440048 PIGBOS1A0A0B4J2F0 54 aa17.79■□□□□ 0.44
VARS-217ENST00000440048 SFT2D2O95562 160 aa17.79■□□□□ 0.44
VARS-217ENST00000440048 NPBWR1P48145 328 aa17.79■□□□□ 0.44
VARS-217ENST00000440048 CD81P60033 236 aa17.79■□□□□ 0.44
VARS-217ENST00000440048 FNDC4Q9H6D8 234 aaPredicted RBP17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms