RNA–Protein interactions for RNA: ENST00000439717.2

HSPG2-206, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 637 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-206ENST00000439717 CORTO00230 105 aa9.04□□□□□ -0.96
HSPG2-206ENST00000439717 SAP30O75446 220 aa9.04□□□□□ -0.96
HSPG2-206ENST00000439717 TCRBP04435 133 aa9.04□□□□□ -0.96
HSPG2-206ENST00000439717 ANXA7P20073 488 aaKnown RBP9.04□□□□□ -0.96
HSPG2-206ENST00000439717 SYNJ2BPP57105 145 aa9.04□□□□□ -0.96
HSPG2-206ENST00000439717 KRTAP10-11P60412 298 aa9.04□□□□□ -0.96
HSPG2-206ENST00000439717 DHRS2Q13268 280 aa9.04□□□□□ -0.96
HSPG2-206ENST00000439717 C4orf46Q504U0 113 aa9.04□□□□□ -0.96
HSPG2-206ENST00000439717 LYG2Q86SG7 212 aa9.04□□□□□ -0.96
HSPG2-206ENST00000439717 GPHB5Q86YW7 130 aa9.04□□□□□ -0.96
HSPG2-206ENST00000439717 COQ8AQ8NI60 647 aa9.04□□□□□ -0.96
HSPG2-206ENST00000439717 SCARB1Q8WTV0 552 aa9.04□□□□□ -0.96
HSPG2-206ENST00000439717 MISP3Q96FF7 219 aa9.04□□□□□ -0.96
HSPG2-206ENST00000439717 OR4C12Q96R67 309 aa9.04□□□□□ -0.96
HSPG2-206ENST00000439717 GAR1Q9NY12 217 aaKnown RBP9.04□□□□□ -0.96
HSPG2-206ENST00000439717 C21orf62Q9NYP8 219 aa9.04□□□□□ -0.96
HSPG2-206ENST00000439717 PEMTQ9UBM1 199 aa9.04□□□□□ -0.96
HSPG2-206ENST00000439717 HSPB7Q9UBY9 170 aa9.04□□□□□ -0.96
HSPG2-206ENST00000439717 S4R3C0 116 aa9.04□□□□□ -0.96
HSPG2-206ENST00000439717 FAM240BA0A1B0GVZ2 78 aa9.03□□□□□ -0.96
HSPG2-206ENST00000439717 CEBPZOSA8MTT3 80 aa9.03□□□□□ -0.96
HSPG2-206ENST00000439717 I3L2K1 104 aa9.03□□□□□ -0.96
HSPG2-206ENST00000439717 LGALS9O00182 355 aa9.03□□□□□ -0.96
HSPG2-206ENST00000439717 PITX3O75364 302 aa9.03□□□□□ -0.96
HSPG2-206ENST00000439717 OR2C1O95371 312 aa9.03□□□□□ -0.96
HSPG2-206ENST00000439717 RNASE2P10153 161 aaKnown RBP9.03□□□□□ -0.96
HSPG2-206ENST00000439717 FCGR2BP31994 310 aaPredicted RBP9.03□□□□□ -0.96
HSPG2-206ENST00000439717 GPR183P32249 361 aa9.03□□□□□ -0.96
HSPG2-206ENST00000439717 HTR2BP41595 481 aa9.03□□□□□ -0.96
HSPG2-206ENST00000439717 TNFRSF9Q07011 255 aa9.03□□□□□ -0.96
HSPG2-206ENST00000439717 BSXQ3C1V8 233 aa9.03□□□□□ -0.96
HSPG2-206ENST00000439717 SPSB3Q6PJ21 355 aa9.03□□□□□ -0.96
HSPG2-206ENST00000439717 PLET1Q6UQ28 207 aa9.03□□□□□ -0.96
HSPG2-206ENST00000439717 OR1S1Q8NH92 325 aa9.03□□□□□ -0.96
HSPG2-206ENST00000439717 BSCL2Q96G97 398 aaPredicted RBP9.03□□□□□ -0.96
HSPG2-206ENST00000439717 TXN2Q99757 166 aa9.03□□□□□ -0.96
HSPG2-206ENST00000439717 HIPK2Q9H2X6 1198 aa9.03□□□□□ -0.96
HSPG2-206ENST00000439717 HEYLQ9NQ87 328 aaPredicted RBP9.03□□□□□ -0.96
HSPG2-206ENST00000439717 AURKAIP1Q9NWT8 199 aaPredicted RBP9.03□□□□□ -0.96
HSPG2-206ENST00000439717 SIGLEC8Q9NYZ4 499 aa9.03□□□□□ -0.96
HSPG2-206ENST00000439717 TBC1D24Q9ULP9 559 aa9.03□□□□□ -0.96
HSPG2-206ENST00000439717 NOTCH3Q9UM47 2321 aa9.03□□□□□ -0.96
HSPG2-206ENST00000439717 FAM90A26D6RGX4 464 aa9.02□□□□□ -0.97
HSPG2-206ENST00000439717 TGOLN2O43493 480 aa9.02□□□□□ -0.97
HSPG2-206ENST00000439717 MT-CO2P00403 227 aa9.02□□□□□ -0.97
HSPG2-206ENST00000439717 HOXB5P09067 269 aa9.02□□□□□ -0.97
HSPG2-206ENST00000439717 MFAP4P55083 255 aa9.02□□□□□ -0.97
HSPG2-206ENST00000439717 FAM106AQ4KMX7 169 aa9.02□□□□□ -0.97
HSPG2-206ENST00000439717 C2orf83Q53S99 150 aa9.02□□□□□ -0.97
HSPG2-206ENST00000439717 IL34Q6ZMJ4 242 aa9.02□□□□□ -0.97
HSPG2-206ENST00000439717 NOXA1Q86UR1 476 aa9.02□□□□□ -0.97
HSPG2-206ENST00000439717 NUDT15Q9NV35 164 aa9.02□□□□□ -0.97
HSPG2-206ENST00000439717 TRAV6A0A075B6T7 132 aa9.01□□□□□ -0.97
HSPG2-206ENST00000439717 IGHV3-21A0A0B4J1V1 117 aa9.01□□□□□ -0.97
HSPG2-206ENST00000439717 OR2T8A6NH00 312 aa9.01□□□□□ -0.97
HSPG2-206ENST00000439717 F8W735 103 aaPredicted RBP9.01□□□□□ -0.97
HSPG2-206ENST00000439717 NXPH3O95157 252 aa9.01□□□□□ -0.97
HSPG2-206ENST00000439717 IFNA21P01568 189 aa9.01□□□□□ -0.97
HSPG2-206ENST00000439717 PRB2P02812 416 aaPredicted RBP9.01□□□□□ -0.97
HSPG2-206ENST00000439717 CSN3P07498 182 aa9.01□□□□□ -0.97
HSPG2-206ENST00000439717 H2AFB2P0C5Z0 115 aa9.01□□□□□ -0.97
HSPG2-206ENST00000439717 ATP5IP56385 69 aaPredicted RBP9.01□□□□□ -0.97
HSPG2-206ENST00000439717 Q56UQ5 140 aa9.01□□□□□ -0.97
HSPG2-206ENST00000439717 GGNBP1Q5YKI7 109 aa9.01□□□□□ -0.97
HSPG2-206ENST00000439717 DUSP18Q8NEJ0 188 aa9.01□□□□□ -0.97
HSPG2-206ENST00000439717 SLC24A4Q8NFF2 622 aa9.01□□□□□ -0.97
HSPG2-206ENST00000439717 RNASEH2CQ8TDP1 164 aaKnown RBP9.01□□□□□ -0.97
HSPG2-206ENST00000439717 DTD1Q8TEA8 209 aa9.01□□□□□ -0.97
HSPG2-206ENST00000439717 MITD1Q8WV92 249 aa9.01□□□□□ -0.97
HSPG2-206ENST00000439717 PINX1Q96BK5 328 aaKnown RBP9.01□□□□□ -0.97
HSPG2-206ENST00000439717 ZNF436Q9C0F3 470 aaPredicted RBP9.01□□□□□ -0.97
HSPG2-206ENST00000439717 RBKSQ9H477 322 aa9.01□□□□□ -0.97
HSPG2-206ENST00000439717 U3KQ87 197 aa9.01□□□□□ -0.97
HSPG2-206ENST00000439717 RPS10-NUDT3A0A1W2PQS6 291 aa9□□□□□ -0.97
HSPG2-206ENST00000439717 A8MWP6 167 aa9□□□□□ -0.97
HSPG2-206ENST00000439717 NUPL2O15504 423 aaKnown RBP9□□□□□ -0.97
HSPG2-206ENST00000439717 MED6O75586 246 aa9□□□□□ -0.97
HSPG2-206ENST00000439717 IGLV1-51P01701 117 aa9□□□□□ -0.97
HSPG2-206ENST00000439717 NPY1RP25929 384 aa9□□□□□ -0.97
HSPG2-206ENST00000439717 NPBWR1P48145 328 aa9□□□□□ -0.97
HSPG2-206ENST00000439717 DEFA1P59665 94 aa9□□□□□ -0.97
HSPG2-206ENST00000439717 DEFA3P59666 94 aa9□□□□□ -0.97
HSPG2-206ENST00000439717 IFITM3Q01628 133 aa9□□□□□ -0.97
HSPG2-206ENST00000439717 UBAC2Q8NBM4 344 aa9□□□□□ -0.97
HSPG2-206ENST00000439717 ENKURQ8TC29 256 aa9□□□□□ -0.97
HSPG2-206ENST00000439717 PALMDQ9NP74 551 aa9□□□□□ -0.97
HSPG2-206ENST00000439717 ZC4H2Q9NQZ6 224 aa9□□□□□ -0.97
HSPG2-206ENST00000439717 ZNF256Q9Y2P7 627 aaPredicted RBP9□□□□□ -0.97
HSPG2-206ENST00000439717 ZNF320A2RRD8 509 aa8.99□□□□□ -0.97
HSPG2-206ENST00000439717 C2orf70A6NJV1 201 aa8.99□□□□□ -0.97
HSPG2-206ENST00000439717 NDUFA4O00483 81 aa8.99□□□□□ -0.97
HSPG2-206ENST00000439717 GNG7O60262 68 aa8.99□□□□□ -0.97
HSPG2-206ENST00000439717 ADAP1O75689 374 aa8.99□□□□□ -0.97
HSPG2-206ENST00000439717 LY86O95711 162 aa8.99□□□□□ -0.97
HSPG2-206ENST00000439717 CTSGP08311 255 aa8.99□□□□□ -0.97
HSPG2-206ENST00000439717 OPRK1P41145 380 aa8.99□□□□□ -0.97
HSPG2-206ENST00000439717 ELLP55199 621 aaPredicted RBP8.99□□□□□ -0.97
HSPG2-206ENST00000439717 RELQ04864 619 aaPredicted RBP8.99□□□□□ -0.97
HSPG2-206ENST00000439717 DCTN2Q13561 401 aaKnown RBP8.99□□□□□ -0.97
HSPG2-206ENST00000439717 OR52B4Q8NGK2 314 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms