RNA–Protein interactions for RNA: ENST00000439316.6

CLCNKA-203, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 2 BASIC

Gene CLCNKA, Length 1,997 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-203ENST00000439316 MOB3BQ86TA1 216 aa13.36□□□□□ -0.27
CLCNKA-203ENST00000439316 PNKDQ8N490 385 aa13.36□□□□□ -0.27
CLCNKA-203ENST00000439316 TMEM106BQ9NUM4 274 aa13.36□□□□□ -0.27
CLCNKA-203ENST00000439316 IL19Q9UHD0 177 aa13.36□□□□□ -0.27
CLCNKA-203ENST00000439316 RPUSD1Q9UJJ7 312 aaKnown RBP13.36□□□□□ -0.27
CLCNKA-203ENST00000439316 CADP27708 2225 aa13.36□□□□□ -0.27
CLCNKA-203ENST00000439316 MMP23AO75900 390 aa13.36□□□□□ -0.27
CLCNKA-203ENST00000439316 OR5G3P0C626 314 aa13.36□□□□□ -0.27
CLCNKA-203ENST00000439316 GNG4P50150 75 aa13.36□□□□□ -0.27
CLCNKA-203ENST00000439316 OR5I1Q13606 314 aa13.36□□□□□ -0.27
CLCNKA-203ENST00000439316 RTL8BQ17RB0 113 aa13.36□□□□□ -0.27
CLCNKA-203ENST00000439316 C2orf83Q53S99 150 aa13.36□□□□□ -0.27
CLCNKA-203ENST00000439316 Q6ZWC4 215 aa13.36□□□□□ -0.27
CLCNKA-203ENST00000439316 SLC35D1Q9NTN3 355 aa13.36□□□□□ -0.27
CLCNKA-203ENST00000439316 KALRNO60229 2985 aa13.36□□□□□ -0.27
CLCNKA-203ENST00000439316 SRRM4A7MD48 611 aaKnown RBP13.35□□□□□ -0.27
CLCNKA-203ENST00000439316 SERF1AO75920 110 aa13.35□□□□□ -0.27
CLCNKA-203ENST00000439316 IGHV1-46P01743 117 aa13.35□□□□□ -0.27
CLCNKA-203ENST00000439316 IGKV1-16P04430 117 aa13.35□□□□□ -0.27
CLCNKA-203ENST00000439316 CRYBB3P26998 211 aa13.35□□□□□ -0.27
CLCNKA-203ENST00000439316 TNFAIP6P98066 277 aaPredicted RBP13.35□□□□□ -0.27
CLCNKA-203ENST00000439316 Q0VG73 95 aa13.35□□□□□ -0.27
CLCNKA-203ENST00000439316 PQLC2Q6ZP29 291 aa13.35□□□□□ -0.27
CLCNKA-203ENST00000439316 ZNF788Q6ZQV5 615 aa13.35□□□□□ -0.27
CLCNKA-203ENST00000439316 PRORYQ9H606 182 aa13.35□□□□□ -0.27
CLCNKA-203ENST00000439316 BET1LQ9NYM9 111 aa13.35□□□□□ -0.27
CLCNKA-203ENST00000439316 A0A0G2JNJ9 132 aa13.34□□□□□ -0.27
CLCNKA-203ENST00000439316 TEX50A0A1B0GTY4 177 aa13.34□□□□□ -0.27
CLCNKA-203ENST00000439316 HELTA6NFD8 242 aa13.34□□□□□ -0.27
CLCNKA-203ENST00000439316 FCN1O00602 326 aa13.34□□□□□ -0.27
CLCNKA-203ENST00000439316 IER3P46695 156 aa13.34□□□□□ -0.27
CLCNKA-203ENST00000439316 NUTF2P61970 127 aaKnown RBP13.34□□□□□ -0.27
CLCNKA-203ENST00000439316 RANP62826 216 aaKnown RBP13.34□□□□□ -0.27
CLCNKA-203ENST00000439316 TGIF2LXQ8IUE1 241 aa13.34□□□□□ -0.27
CLCNKA-203ENST00000439316 FAM216BQ8N7L0 139 aa13.34□□□□□ -0.27
CLCNKA-203ENST00000439316 OR1L8Q8NGR8 309 aa13.34□□□□□ -0.27
CLCNKA-203ENST00000439316 TBX15Q96SF7 602 aa13.34□□□□□ -0.27
CLCNKA-203ENST00000439316 CCL13Q99616 98 aa13.34□□□□□ -0.27
CLCNKA-203ENST00000439316 C19orf24Q9BVV8 132 aa13.34□□□□□ -0.27
CLCNKA-203ENST00000439316 SNHG12Q9BXW3 62 aa13.34□□□□□ -0.27
CLCNKA-203ENST00000439316 GNB1LQ9BYB4 327 aa13.34□□□□□ -0.27
CLCNKA-203ENST00000439316 CBLN4Q9NTU7 201 aa13.34□□□□□ -0.27
CLCNKA-203ENST00000439316 Q9UFV3 132 aa13.34□□□□□ -0.27
CLCNKA-203ENST00000439316 ADGRG4Q8IZF6 3080 aa13.34□□□□□ -0.27
CLCNKA-203ENST00000439316 SMG1Q96Q15 3661 aaKnown RBP13.34□□□□□ -0.27
CLCNKA-203ENST00000439316 SNURFLB1AK76 121 aa13.34□□□□□ -0.27
CLCNKA-203ENST00000439316 GGTLC3B5MD39 225 aa13.34□□□□□ -0.27
CLCNKA-203ENST00000439316 FRMD6-AS1P0C7T7 363 aa13.34□□□□□ -0.27
CLCNKA-203ENST00000439316 RNASE2P10153 161 aaKnown RBP13.34□□□□□ -0.27
CLCNKA-203ENST00000439316 OR8I2Q8N0Y5 310 aa13.34□□□□□ -0.27
CLCNKA-203ENST00000439316 DEFB108BQ8NET1 73 aa13.34□□□□□ -0.27
CLCNKA-203ENST00000439316 OR5B3Q8NH48 314 aa13.34□□□□□ -0.27
CLCNKA-203ENST00000439316 OSTCQ9NRP0 149 aa13.34□□□□□ -0.27
CLCNKA-203ENST00000439316 ZNF705FA8MVS1 300 aaPredicted RBP13.33□□□□□ -0.28
CLCNKA-203ENST00000439316 ZNF705DP0CH99 300 aaPredicted RBP13.33□□□□□ -0.28
CLCNKA-203ENST00000439316 ZNF705BP0CI00 300 aaPredicted RBP13.33□□□□□ -0.28
CLCNKA-203ENST00000439316 SAA1P0DJI8 122 aaPredicted RBP13.33□□□□□ -0.28
CLCNKA-203ENST00000439316 TAS2R45P59539 299 aa13.33□□□□□ -0.28
CLCNKA-203ENST00000439316 RBPJQ06330 500 aa13.33□□□□□ -0.28
CLCNKA-203ENST00000439316 OR7C2O60412 319 aa13.32□□□□□ -0.28
CLCNKA-203ENST00000439316 GATA2P23769 480 aaPredicted RBP13.32□□□□□ -0.28
CLCNKA-203ENST00000439316 CX3CL1P78423 397 aa13.32□□□□□ -0.28
CLCNKA-203ENST00000439316 TPTE2P1Q5T6R2 138 aa13.32□□□□□ -0.28
CLCNKA-203ENST00000439316 TEX36Q5VZQ5 186 aa13.32□□□□□ -0.28
CLCNKA-203ENST00000439316 TEX43Q6ZNM6 134 aa13.32□□□□□ -0.28
CLCNKA-203ENST00000439316 ZNF833PQ6ZTB9 187 aa13.32□□□□□ -0.28
CLCNKA-203ENST00000439316 ST6GALNAC3Q8NDV1 305 aa13.32□□□□□ -0.28
CLCNKA-203ENST00000439316 ZNRD1Q9P1U0 126 aa13.32□□□□□ -0.28
CLCNKA-203ENST00000439316 A0A1W2PRE2 83 aa13.32□□□□□ -0.28
CLCNKA-203ENST00000439316 MT-ND6P03923 174 aa13.32□□□□□ -0.28
CLCNKA-203ENST00000439316 SELENOVP59797 346 aa13.32□□□□□ -0.28
CLCNKA-203ENST00000439316 CD69Q07108 199 aa13.32□□□□□ -0.28
CLCNKA-203ENST00000439316 TIGITQ495A1 244 aa13.32□□□□□ -0.28
CLCNKA-203ENST00000439316 TOMM20LQ6UXN7 152 aa13.32□□□□□ -0.28
CLCNKA-203ENST00000439316 OR9G1Q8NH87 305 aa13.32□□□□□ -0.28
CLCNKA-203ENST00000439316 IGF2BP2-AS1Q96M15 143 aa13.32□□□□□ -0.28
CLCNKA-203ENST00000439316 F2Z2F3 143 aa13.31□□□□□ -0.28
CLCNKA-203ENST00000439316 IGLV2-8P01709 118 aa13.31□□□□□ -0.28
CLCNKA-203ENST00000439316 RAB4AP20338 218 aa13.31□□□□□ -0.28
CLCNKA-203ENST00000439316 LY6DQ14210 128 aa13.31□□□□□ -0.28
CLCNKA-203ENST00000439316 WDR73Q6P4I2 378 aa13.31□□□□□ -0.28
CLCNKA-203ENST00000439316 BAGE3Q86Y29 109 aa13.31□□□□□ -0.28
CLCNKA-203ENST00000439316 BAGE2Q86Y30 109 aa13.31□□□□□ -0.28
CLCNKA-203ENST00000439316 HSPB9Q9BQS6 159 aa13.31□□□□□ -0.28
CLCNKA-203ENST00000439316 SLC25A33Q9BSK2 321 aa13.31□□□□□ -0.28
CLCNKA-203ENST00000439316 MRPL32Q9BYC8 188 aaKnown RBP13.31□□□□□ -0.28
CLCNKA-203ENST00000439316 RNASE7Q9H1E1 156 aaKnown RBP13.31□□□□□ -0.28
CLCNKA-203ENST00000439316 hADV38S2A0JD32 116 aa13.31□□□□□ -0.28
CLCNKA-203ENST00000439316 PSMB11A5LHX3 300 aa13.31□□□□□ -0.28
CLCNKA-203ENST00000439316 M0R143 59 aa13.31□□□□□ -0.28
CLCNKA-203ENST00000439316 ISLRO14498 428 aa13.31□□□□□ -0.28
CLCNKA-203ENST00000439316 C8orf88P0DMB2 117 aa13.31□□□□□ -0.28
CLCNKA-203ENST00000439316 CD33P20138 364 aa13.31□□□□□ -0.28
CLCNKA-203ENST00000439316 TNFSF4P23510 183 aa13.31□□□□□ -0.28
CLCNKA-203ENST00000439316 RPL19P84098 196 aaKnown RBP13.31□□□□□ -0.28
CLCNKA-203ENST00000439316 FAM27E3Q08E93 113 aa13.31□□□□□ -0.28
CLCNKA-203ENST00000439316 COX19Q49B96 90 aa13.31□□□□□ -0.28
CLCNKA-203ENST00000439316 OSR1Q8TAX0 266 aaPredicted RBP13.31□□□□□ -0.28
CLCNKA-203ENST00000439316 NEU1Q99519 415 aa13.31□□□□□ -0.28
CLCNKA-203ENST00000439316 C20orf144Q9BQM9 153 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms