RNA–Protein interactions for RNA: ENST00000438964.6

ACTN1-204, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 3,043 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-204ENST00000438964 VWC2LB2RUY7 222 aa10.99□□□□□ -0.65
ACTN1-204ENST00000438964 TAX1BP3O14907 124 aa10.99□□□□□ -0.65
ACTN1-204ENST00000438964 ARR3P36575 388 aa10.99□□□□□ -0.65
ACTN1-204ENST00000438964 ERVK-16P61578 105 aa10.99□□□□□ -0.65
ACTN1-204ENST00000438964 FAM201AQ5SY85 155 aa10.99□□□□□ -0.65
ACTN1-204ENST00000438964 PPP1R32Q7Z5V6 425 aa10.99□□□□□ -0.65
ACTN1-204ENST00000438964 ZNRF1Q8ND25 227 aa10.99□□□□□ -0.65
ACTN1-204ENST00000438964 DEFB127Q9H1M4 99 aa10.99□□□□□ -0.65
ACTN1-204ENST00000438964 KLF13Q9Y2Y9 288 aaPredicted RBP10.99□□□□□ -0.65
ACTN1-204ENST00000438964 PTPRBP23467 1997 aa10.99□□□□□ -0.65
ACTN1-204ENST00000438964 PPOXP50336 477 aa10.98□□□□□ -0.65
ACTN1-204ENST00000438964 GABRA6Q16445 453 aa10.98□□□□□ -0.65
ACTN1-204ENST00000438964 NUP35Q8NFH5 326 aa10.98□□□□□ -0.65
ACTN1-204ENST00000438964 SARAFQ96BY9 339 aa10.98□□□□□ -0.65
ACTN1-204ENST00000438964 C2orf70A6NJV1 201 aa10.98□□□□□ -0.65
ACTN1-204ENST00000438964 C9JCJ5 164 aa10.98□□□□□ -0.65
ACTN1-204ENST00000438964 HLA-DQA1P01909 254 aa10.98□□□□□ -0.65
ACTN1-204ENST00000438964 ARG2P78540 354 aa10.98□□□□□ -0.65
ACTN1-204ENST00000438964 PLGLB1Q02325 96 aa10.98□□□□□ -0.65
ACTN1-204ENST00000438964 MUC15Q8N387 334 aa10.98□□□□□ -0.65
ACTN1-204ENST00000438964 SNRNP40Q96DI7 357 aaKnown RBP10.98□□□□□ -0.65
ACTN1-204ENST00000438964 WDR54Q9H977 334 aa10.98□□□□□ -0.65
ACTN1-204ENST00000438964 MRPS16Q9Y3D3 137 aaKnown RBP10.98□□□□□ -0.65
ACTN1-204ENST00000438964 LSM4Q9Y4Z0 139 aaKnown RBP10.98□□□□□ -0.65
ACTN1-204ENST00000438964 MGAQ8IWI9 3026 aa10.98□□□□□ -0.65
ACTN1-204ENST00000438964 MT-CO2P00403 227 aa10.98□□□□□ -0.65
ACTN1-204ENST00000438964 SSBP2P81877 361 aaPredicted RBP10.98□□□□□ -0.65
ACTN1-204ENST00000438964 HES4Q9HCC6 221 aa10.98□□□□□ -0.65
ACTN1-204ENST00000438964 DUSP13Q9UII6 198 aa10.98□□□□□ -0.65
ACTN1-204ENST00000438964 TNRC6BQ9UPQ9 1833 aaKnown RBP10.97□□□□□ -0.65
ACTN1-204ENST00000438964 TRAV8-6A0A0B4J262 113 aa10.97□□□□□ -0.65
ACTN1-204ENST00000438964 HIGD1CA8MV81 97 aa10.97□□□□□ -0.65
ACTN1-204ENST00000438964 SMPD2O60906 423 aa10.97□□□□□ -0.65
ACTN1-204ENST00000438964 MT-ND6P03923 174 aa10.97□□□□□ -0.65
ACTN1-204ENST00000438964 LINC00869P0C866 280 aa10.97□□□□□ -0.65
ACTN1-204ENST00000438964 BPIFB3P59826 476 aa10.97□□□□□ -0.65
ACTN1-204ENST00000438964 Q71RC1 249 aaPredicted RBP10.97□□□□□ -0.65
ACTN1-204ENST00000438964 TMEM116Q8NCL8 245 aa10.97□□□□□ -0.65
ACTN1-204ENST00000438964 OR10W1Q8NGF6 305 aa10.97□□□□□ -0.65
ACTN1-204ENST00000438964 OR8B3Q8NGG8 313 aa10.97□□□□□ -0.65
ACTN1-204ENST00000438964 ZZEF1O43149 2961 aa10.97□□□□□ -0.65
ACTN1-204ENST00000438964 RPL19P84098 196 aaKnown RBP10.97□□□□□ -0.65
ACTN1-204ENST00000438964 SLC35E4Q6ICL7 350 aa10.97□□□□□ -0.65
ACTN1-204ENST00000438964 C19orf35Q6ZS72 473 aa10.97□□□□□ -0.65
ACTN1-204ENST00000438964 URB1-AS1Q96HZ7 61 aa10.97□□□□□ -0.65
ACTN1-204ENST00000438964 S1PR3Q99500 378 aa10.97□□□□□ -0.65
ACTN1-204ENST00000438964 TRBV9A0A0B4J1U6 114 aa10.96□□□□□ -0.65
ACTN1-204ENST00000438964 H0YJW9 148 aa10.96□□□□□ -0.65
ACTN1-204ENST00000438964 ISLRO14498 428 aa10.96□□□□□ -0.65
ACTN1-204ENST00000438964 MPDU1O75352 247 aa10.96□□□□□ -0.65
ACTN1-204ENST00000438964 UBE2L3P68036 154 aaKnown RBP10.96□□□□□ -0.65
ACTN1-204ENST00000438964 PSG9Q00887 426 aa10.96□□□□□ -0.65
ACTN1-204ENST00000438964 BLNKQ8WV28 456 aa10.96□□□□□ -0.65
ACTN1-204ENST00000438964 C11orf52Q96A22 123 aa10.96□□□□□ -0.65
ACTN1-204ENST00000438964 PPIAL4DF5H284 164 aa10.96□□□□□ -0.66
ACTN1-204ENST00000438964 KLK10O43240 276 aa10.96□□□□□ -0.66
ACTN1-204ENST00000438964 AREGP15514 252 aa10.96□□□□□ -0.66
ACTN1-204ENST00000438964 ZBTB34Q8NCN2 500 aa10.96□□□□□ -0.66
ACTN1-204ENST00000438964 MEGF9Q9H1U4 602 aa10.96□□□□□ -0.66
ACTN1-204ENST00000438964 ENY2Q9NPA8 101 aa10.96□□□□□ -0.66
ACTN1-204ENST00000438964 SMIM27A0A1W2PRY6 76 aa10.95□□□□□ -0.66
ACTN1-204ENST00000438964 IZUMO1RA6ND01 250 aa10.95□□□□□ -0.66
ACTN1-204ENST00000438964 SPINT2O43291 252 aa10.95□□□□□ -0.66
ACTN1-204ENST00000438964 SRFP11831 508 aa10.95□□□□□ -0.66
ACTN1-204ENST00000438964 TBC1D28Q2M2D7 210 aa10.95□□□□□ -0.66
ACTN1-204ENST00000438964 C11orf53Q8IXP5 236 aa10.95□□□□□ -0.66
ACTN1-204ENST00000438964 CD177Q8N6Q3 437 aa10.95□□□□□ -0.66
ACTN1-204ENST00000438964 NUDT10Q8NFP7 164 aa10.95□□□□□ -0.66
ACTN1-204ENST00000438964 SAP25Q8TEE9 199 aa10.95□□□□□ -0.66
ACTN1-204ENST00000438964 NUDT11Q96G61 164 aa10.95□□□□□ -0.66
ACTN1-204ENST00000438964 SAA2-SAA4A0A096LPE2 208 aa10.95□□□□□ -0.66
ACTN1-204ENST00000438964 APELAP0DMC3 54 aa10.95□□□□□ -0.66
ACTN1-204ENST00000438964 RAB31Q13636 194 aa10.95□□□□□ -0.66
ACTN1-204ENST00000438964 DUX4L9Q6RFH8 374 aaPredicted RBP10.95□□□□□ -0.66
ACTN1-204ENST00000438964 KLF14Q8TD94 323 aaPredicted RBP10.95□□□□□ -0.66
ACTN1-204ENST00000438964 RND1Q92730 232 aa10.95□□□□□ -0.66
ACTN1-204ENST00000438964 FNDC4Q9H6D8 234 aaPredicted RBP10.95□□□□□ -0.66
ACTN1-204ENST00000438964 OSTCQ9NRP0 149 aa10.95□□□□□ -0.66
ACTN1-204ENST00000438964 PCNX1Q96RV3 2341 aa10.95□□□□□ -0.66
ACTN1-204ENST00000438964 TRAV9-1A0A075B6T8 112 aa10.95□□□□□ -0.66
ACTN1-204ENST00000438964 SPRNQ5BIV9 151 aa10.95□□□□□ -0.66
ACTN1-204ENST00000438964 ZNF766Q5HY98 468 aa10.95□□□□□ -0.66
ACTN1-204ENST00000438964 BVES-AS1Q5T3Y7 98 aa10.95□□□□□ -0.66
ACTN1-204ENST00000438964 ACP7Q6ZNF0 438 aa10.95□□□□□ -0.66
ACTN1-204ENST00000438964 TEX45Q8NA69 505 aa10.95□□□□□ -0.66
ACTN1-204ENST00000438964 OR5B3Q8NH48 314 aa10.95□□□□□ -0.66
ACTN1-204ENST00000438964 TMEM70Q9BUB7 260 aa10.95□□□□□ -0.66
ACTN1-204ENST00000438964 TTTY12Q9BZ98 90 aa10.95□□□□□ -0.66
ACTN1-204ENST00000438964 TRAV30A0A087WSZ9 112 aa10.94□□□□□ -0.66
ACTN1-204ENST00000438964 GAGE12BA1L429 117 aa10.94□□□□□ -0.66
ACTN1-204ENST00000438964 APOA2P02652 100 aa10.94□□□□□ -0.66
ACTN1-204ENST00000438964 FXYD7P58549 80 aa10.94□□□□□ -0.66
ACTN1-204ENST00000438964 LPAL2Q16609 132 aa10.94□□□□□ -0.66
ACTN1-204ENST00000438964 Q8IYB0 196 aa10.94□□□□□ -0.66
ACTN1-204ENST00000438964 TMEM251Q8N6I4 163 aa10.94□□□□□ -0.66
ACTN1-204ENST00000438964 TMEM105Q8N8V8 129 aa10.94□□□□□ -0.66
ACTN1-204ENST00000438964 TRIB1Q96RU8 372 aa10.94□□□□□ -0.66
ACTN1-204ENST00000438964 TXNDC17Q9BRA2 123 aa10.94□□□□□ -0.66
ACTN1-204ENST00000438964 PCSK5Q92824 1860 aa10.94□□□□□ -0.66
ACTN1-204ENST00000438964 IGKV3D-15A0A087WSY6 115 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms