RNA–Protein interactions for RNA: ENST00000437340.5

CPNE1-216, Transcript of copine 1, humanhuman

TSL 1 (best)

Gene CPNE1, Length 1,755 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-216ENST00000437340 FLI1Q01543 452 aaPredicted RBP20.62■□□□□ 0.89
CPNE1-216ENST00000437340 RNF212Q495C1 297 aa20.62■□□□□ 0.89
CPNE1-216ENST00000437340 HCP5Q6MZN7 132 aa20.62■□□□□ 0.89
CPNE1-216ENST00000437340 SPNS3Q6ZMD2 512 aa20.62■□□□□ 0.89
CPNE1-216ENST00000437340 OR4F5Q8NH21 305 aa20.62■□□□□ 0.89
CPNE1-216ENST00000437340 HIST1H2BAQ96A08 127 aa20.62■□□□□ 0.89
CPNE1-216ENST00000437340 OR4F4Q96R69 305 aa20.62■□□□□ 0.89
CPNE1-216ENST00000437340 METTL1Q9UBP6 276 aaKnown RBP20.62■□□□□ 0.89
CPNE1-216ENST00000437340 LRRK2Q5S007 2527 aa20.61■□□□□ 0.89
CPNE1-216ENST00000437340 OVOL3O00110 214 aa20.61■□□□□ 0.89
CPNE1-216ENST00000437340 ARL14EPLP0DKL9 152 aa20.61■□□□□ 0.89
CPNE1-216ENST00000437340 HABP2Q14520 560 aaPredicted RBP20.61■□□□□ 0.89
CPNE1-216ENST00000437340 TNXAQ16473 311 aa20.61■□□□□ 0.89
CPNE1-216ENST00000437340 LDLRAD2Q5SZI1 272 aa20.61■□□□□ 0.89
CPNE1-216ENST00000437340 MLXQ9UH92 298 aa20.61■□□□□ 0.89
CPNE1-216ENST00000437340 A1L4Q6 167 aa20.6■□□□□ 0.89
CPNE1-216ENST00000437340 CXorf65A6NEN9 183 aa20.6■□□□□ 0.89
CPNE1-216ENST00000437340 C11orf94C9JXX5 98 aa20.6■□□□□ 0.89
CPNE1-216ENST00000437340 VENTXO95231 258 aa20.6■□□□□ 0.89
CPNE1-216ENST00000437340 OR2C1O95371 312 aa20.6■□□□□ 0.89
CPNE1-216ENST00000437340 MT-CO2P00403 227 aa20.6■□□□□ 0.89
CPNE1-216ENST00000437340 CRYBA1P05813 215 aa20.6■□□□□ 0.89
CPNE1-216ENST00000437340 OR10J1P30954 320 aa20.6■□□□□ 0.89
CPNE1-216ENST00000437340 MLANAQ16655 118 aa20.6■□□□□ 0.89
CPNE1-216ENST00000437340 ISOC2Q96AB3 205 aa20.6■□□□□ 0.89
CPNE1-216ENST00000437340 SEPSECSQ9HD40 501 aaKnown RBP20.6■□□□□ 0.89
CPNE1-216ENST00000437340 TIMM23O14925 209 aa20.59■□□□□ 0.89
CPNE1-216ENST00000437340 PDE6DO43924 150 aa20.59■□□□□ 0.89
CPNE1-216ENST00000437340 CYP2G1PQ6ZSU1 146 aa20.59■□□□□ 0.89
CPNE1-216ENST00000437340 SMIM7Q9BQ49 75 aa20.59■□□□□ 0.89
CPNE1-216ENST00000437340 NAT8Q9UHE5 227 aa20.59■□□□□ 0.89
CPNE1-216ENST00000437340 ZFP36P26651 326 aaKnown RBP20.58■□□□□ 0.89
CPNE1-216ENST00000437340 ETFRF1Q6IPR1 90 aa20.58■□□□□ 0.89
CPNE1-216ENST00000437340 CFHR4Q92496 578 aa20.58■□□□□ 0.89
CPNE1-216ENST00000437340 FNDC4Q9H6D8 234 aaPredicted RBP20.58■□□□□ 0.89
CPNE1-216ENST00000437340 OOSP1A8MZH6 123 aa20.57■□□□□ 0.88
CPNE1-216ENST00000437340 TMEM241Q24JQ0 296 aa20.57■□□□□ 0.88
CPNE1-216ENST00000437340 OR2T6Q8NHC8 308 aa20.57■□□□□ 0.88
CPNE1-216ENST00000437340 YPEL4Q96NS1 127 aa20.57■□□□□ 0.88
CPNE1-216ENST00000437340 SRSF8Q9BRL6 282 aaKnown RBP20.57■□□□□ 0.88
CPNE1-216ENST00000437340 TMEM242Q9NWH2 141 aa20.57■□□□□ 0.88
CPNE1-216ENST00000437340 FUT9Q9Y231 359 aa20.57■□□□□ 0.88
CPNE1-216ENST00000437340 PRELID1Q9Y255 219 aa20.57■□□□□ 0.88
CPNE1-216ENST00000437340 KLRD1Q13241 179 aa20.57■□□□□ 0.88
CPNE1-216ENST00000437340 FAM78BQ5VT40 261 aa20.57■□□□□ 0.88
CPNE1-216ENST00000437340 VMO1Q7Z5L0 202 aa20.57■□□□□ 0.88
CPNE1-216ENST00000437340 ACY3Q96HD9 319 aa20.57■□□□□ 0.88
CPNE1-216ENST00000437340 PARLQ9H300 379 aa20.57■□□□□ 0.88
CPNE1-216ENST00000437340 FBXL15Q9H469 300 aa20.57■□□□□ 0.88
CPNE1-216ENST00000437340 F6UZH7 168 aa20.56■□□□□ 0.88
CPNE1-216ENST00000437340 CLN5O75503 358 aa20.56■□□□□ 0.88
CPNE1-216ENST00000437340 GCHFRP30047 84 aa20.56■□□□□ 0.88
CPNE1-216ENST00000437340 PAX2Q02962 417 aa20.56■□□□□ 0.88
CPNE1-216ENST00000437340 MINOS1Q5TGZ0 78 aa20.56■□□□□ 0.88
CPNE1-216ENST00000437340 CCDC144NLQ6NUI1 221 aa20.56■□□□□ 0.88
CPNE1-216ENST00000437340 THAP8Q8NA92 274 aa20.56■□□□□ 0.88
CPNE1-216ENST00000437340 OR1P1Q8NH06 330 aa20.56■□□□□ 0.88
CPNE1-216ENST00000437340 RPUSD4Q96CM3 377 aaKnown RBP20.56■□□□□ 0.88
CPNE1-216ENST00000437340 MINOS1-NBL1R4GNA1 71 aa20.56■□□□□ 0.88
CPNE1-216ENST00000437340 OR5G3P0C626 314 aa20.55■□□□□ 0.88
CPNE1-216ENST00000437340 SPATA31B1PQ5VZV4 182 aa20.55■□□□□ 0.88
CPNE1-216ENST00000437340 FAM24BQ8N5W8 94 aa20.55■□□□□ 0.88
CPNE1-216ENST00000437340 HILPDAQ9Y5L2 63 aa20.55■□□□□ 0.88
CPNE1-216ENST00000437340 J3QKU1 62 aa20.54■□□□□ 0.88
CPNE1-216ENST00000437340 CORTO00230 105 aa20.54■□□□□ 0.88
CPNE1-216ENST00000437340 CRYGCP07315 174 aa20.54■□□□□ 0.88
CPNE1-216ENST00000437340 LHFPL4Q7Z7J7 247 aa20.54■□□□□ 0.88
CPNE1-216ENST00000437340 NPBQ8NG41 125 aa20.54■□□□□ 0.88
CPNE1-216ENST00000437340 IGFBPL1Q8WX77 278 aa20.54■□□□□ 0.88
CPNE1-216ENST00000437340 RNF2Q99496 336 aa20.54■□□□□ 0.88
CPNE1-216ENST00000437340 ARL2-SNX15V9GYD0 113 aa20.54■□□□□ 0.88
CPNE1-216ENST00000437340 IGHV2-70DA0A0C4DH43 119 aa20.54■□□□□ 0.88
CPNE1-216ENST00000437340 TEX22C9J3V5 150 aa20.54■□□□□ 0.88
CPNE1-216ENST00000437340 TSPAN9O75954 239 aa20.54■□□□□ 0.88
CPNE1-216ENST00000437340 MOSP00540 346 aa20.54■□□□□ 0.88
CPNE1-216ENST00000437340 REG1AP05451 166 aa20.54■□□□□ 0.88
CPNE1-216ENST00000437340 RAB5AP20339 215 aa20.54■□□□□ 0.88
CPNE1-216ENST00000437340 GNB1P62873 340 aa20.54■□□□□ 0.88
CPNE1-216ENST00000437340 PLGLAQ15195 96 aa20.54■□□□□ 0.88
CPNE1-216ENST00000437340 ZNF674Q2M3X9 581 aa20.54■□□□□ 0.88
CPNE1-216ENST00000437340 CST9LP1Q5W188 147 aa20.54■□□□□ 0.88
CPNE1-216ENST00000437340 SIRPDQ9H106 197 aa20.54■□□□□ 0.88
CPNE1-216ENST00000437340 NBR2O15453 112 aa20.53■□□□□ 0.88
CPNE1-216ENST00000437340 AREGP15514 252 aa20.53■□□□□ 0.88
CPNE1-216ENST00000437340 HOXB4P17483 251 aaPredicted RBP20.53■□□□□ 0.88
CPNE1-216ENST00000437340 UBE2G2P60604 165 aa20.53■□□□□ 0.88
CPNE1-216ENST00000437340 SELENOTP62341 195 aa20.53■□□□□ 0.88
CPNE1-216ENST00000437340 MMDQ15546 238 aa20.53■□□□□ 0.88
CPNE1-216ENST00000437340 SRSF12Q8WXF0 261 aaKnown RBP20.53■□□□□ 0.88
CPNE1-216ENST00000437340 MALSU1Q96EH3 234 aa20.53■□□□□ 0.88
CPNE1-216ENST00000437340 CTDSP1Q9GZU7 261 aa20.53■□□□□ 0.88
CPNE1-216ENST00000437340 TECRQ9NZ01 308 aaKnown RBP20.53■□□□□ 0.88
CPNE1-216ENST00000437340 TCRBV4S1A1TA0A5B7 111 aa20.52■□□□□ 0.88
CPNE1-216ENST00000437340 NDUFA3O95167 84 aa20.52■□□□□ 0.88
CPNE1-216ENST00000437340 ATP5G3P48201 142 aa20.52■□□□□ 0.88
CPNE1-216ENST00000437340 TAS2R45P59539 299 aa20.52■□□□□ 0.88
CPNE1-216ENST00000437340 LMO4P61968 165 aa20.52■□□□□ 0.88
CPNE1-216ENST00000437340 SSBP2P81877 361 aaPredicted RBP20.52■□□□□ 0.88
CPNE1-216ENST00000437340 NPIPB3Q92617 1050 aa20.52■□□□□ 0.88
CPNE1-216ENST00000437340 MRPL32Q9BYC8 188 aaKnown RBP20.52■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms