RNA–Protein interactions for RNA: ENST00000434376.6

SCARF1-203, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 3,342 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-203ENST00000434376 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.75□□□□□ -0.37
SCARF1-203ENST00000434376 C17orf100A8MU93 164 aa12.75□□□□□ -0.37
SCARF1-203ENST00000434376 F6UZH7 168 aa12.75□□□□□ -0.37
SCARF1-203ENST00000434376 ARSJQ5FYB0 599 aaPredicted RBP12.75□□□□□ -0.37
SCARF1-203ENST00000434376 OR4S2Q8NH73 311 aa12.75□□□□□ -0.37
SCARF1-203ENST00000434376 VAMP8Q9BV40 100 aa12.75□□□□□ -0.37
SCARF1-203ENST00000434376 COL25A1Q9BXS0 654 aaPredicted RBP12.75□□□□□ -0.37
SCARF1-203ENST00000434376 SEPSECSQ9HD40 501 aaKnown RBP12.75□□□□□ -0.37
SCARF1-203ENST00000434376 OR51B2Q9Y5P1 312 aa12.75□□□□□ -0.37
SCARF1-203ENST00000434376 PPIAL4EA0A075B759 164 aa12.75□□□□□ -0.37
SCARF1-203ENST00000434376 PPIAL4DF5H284 164 aa12.75□□□□□ -0.37
SCARF1-203ENST00000434376 SLC25A17O43808 307 aa12.75□□□□□ -0.37
SCARF1-203ENST00000434376 WNT2P09544 360 aa12.75□□□□□ -0.37
SCARF1-203ENST00000434376 PPIAL4FP0DN26 164 aa12.75□□□□□ -0.37
SCARF1-203ENST00000434376 NPY1RP25929 384 aa12.75□□□□□ -0.37
SCARF1-203ENST00000434376 CDKN1AP38936 164 aa12.75□□□□□ -0.37
SCARF1-203ENST00000434376 NHLRC2Q8NBF2 726 aa12.75□□□□□ -0.37
SCARF1-203ENST00000434376 JPT1Q9UK76 154 aa12.75□□□□□ -0.37
SCARF1-203ENST00000434376 CDSNQ15517 529 aa12.74□□□□□ -0.37
SCARF1-203ENST00000434376 ANAPC16Q96DE5 110 aa12.74□□□□□ -0.37
SCARF1-203ENST00000434376 ITPR1Q14643 2758 aa12.74□□□□□ -0.37
SCARF1-203ENST00000434376 TNFRSF1AP19438 455 aa12.74□□□□□ -0.37
SCARF1-203ENST00000434376 PMCHP20382 165 aa12.74□□□□□ -0.37
SCARF1-203ENST00000434376 TIMP3P35625 211 aa12.74□□□□□ -0.37
SCARF1-203ENST00000434376 UHRF2Q96PU4 802 aa12.74□□□□□ -0.37
SCARF1-203ENST00000434376 NPPCP23582 126 aa12.73□□□□□ -0.37
SCARF1-203ENST00000434376 IER3P46695 156 aa12.73□□□□□ -0.37
SCARF1-203ENST00000434376 TCL1AP56279 114 aa12.73□□□□□ -0.37
SCARF1-203ENST00000434376 OR9G1Q8NH87 305 aa12.73□□□□□ -0.37
SCARF1-203ENST00000434376 OR2T6Q8NHC8 308 aa12.73□□□□□ -0.37
SCARF1-203ENST00000434376 ZCCHC14Q8WYQ9 949 aaKnown RBP12.73□□□□□ -0.37
SCARF1-203ENST00000434376 PLEKHA3Q9HB20 300 aa12.73□□□□□ -0.37
SCARF1-203ENST00000434376 TPSG1Q9NRR2 321 aa12.73□□□□□ -0.37
SCARF1-203ENST00000434376 NKX6-3A6NJ46 265 aa12.73□□□□□ -0.37
SCARF1-203ENST00000434376 E7EUB6 86 aa12.73□□□□□ -0.37
SCARF1-203ENST00000434376 NDUFB3O43676 98 aa12.73□□□□□ -0.37
SCARF1-203ENST00000434376 RELBQ01201 579 aa12.73□□□□□ -0.37
SCARF1-203ENST00000434376 KRTCAP3Q53RY4 240 aa12.73□□□□□ -0.37
SCARF1-203ENST00000434376 DNLZQ5SXM8 178 aa12.73□□□□□ -0.37
SCARF1-203ENST00000434376 TREML4Q6UXN2 200 aa12.73□□□□□ -0.37
SCARF1-203ENST00000434376 ATOH7Q8N100 152 aa12.73□□□□□ -0.37
SCARF1-203ENST00000434376 SLC24A4Q8NFF2 622 aa12.73□□□□□ -0.37
SCARF1-203ENST00000434376 PRR7Q8TB68 274 aa12.73□□□□□ -0.37
SCARF1-203ENST00000434376 CIB3Q96Q77 187 aaPredicted RBP12.73□□□□□ -0.37
SCARF1-203ENST00000434376 COMMD5Q9GZQ3 224 aa12.73□□□□□ -0.37
SCARF1-203ENST00000434376 IL19Q9UHD0 177 aa12.73□□□□□ -0.37
SCARF1-203ENST00000434376 CRISP2P16562 243 aa12.73□□□□□ -0.37
SCARF1-203ENST00000434376 C1orf194Q5T5A4 169 aa12.73□□□□□ -0.37
SCARF1-203ENST00000434376 ZBTB34Q8NCN2 500 aa12.73□□□□□ -0.37
SCARF1-203ENST00000434376 RITA1Q96K30 269 aa12.73□□□□□ -0.37
SCARF1-203ENST00000434376 IDI2-AS1Q9NZ38 188 aa12.73□□□□□ -0.37
SCARF1-203ENST00000434376 hADV38S2A0JD32 116 aa12.72□□□□□ -0.37
SCARF1-203ENST00000434376 F2Z2F3 143 aa12.72□□□□□ -0.37
SCARF1-203ENST00000434376 TMEM250H0YL14 139 aa12.72□□□□□ -0.37
SCARF1-203ENST00000434376 FCN1O00602 326 aa12.72□□□□□ -0.37
SCARF1-203ENST00000434376 SERF1AO75920 110 aa12.72□□□□□ -0.37
SCARF1-203ENST00000434376 TMEM200BQ69YZ2 307 aa12.72□□□□□ -0.37
SCARF1-203ENST00000434376 GSX1Q9H4S2 264 aaPredicted RBP12.72□□□□□ -0.37
SCARF1-203ENST00000434376 E7EQL1 145 aa12.72□□□□□ -0.37
SCARF1-203ENST00000434376 DLEU1O43261 78 aa12.72□□□□□ -0.37
SCARF1-203ENST00000434376 GFRA3O60609 400 aa12.72□□□□□ -0.37
SCARF1-203ENST00000434376 SAA1P0DJI8 122 aaPredicted RBP12.72□□□□□ -0.37
SCARF1-203ENST00000434376 BTF3P20290 206 aaKnown RBP12.72□□□□□ -0.37
SCARF1-203ENST00000434376 NTF3P20783 257 aa12.72□□□□□ -0.37
SCARF1-203ENST00000434376 SP5Q6BEB4 398 aaPredicted RBP12.72□□□□□ -0.37
SCARF1-203ENST00000434376 CEACAM8P31997 349 aaPredicted RBP12.72□□□□□ -0.37
SCARF1-203ENST00000434376 HTD2P86397 168 aa12.72□□□□□ -0.37
SCARF1-203ENST00000434376 IGFL3Q6UXB1 125 aa12.72□□□□□ -0.37
SCARF1-203ENST00000434376 LINC01551Q86U37 167 aa12.72□□□□□ -0.37
SCARF1-203ENST00000434376 TXN2Q99757 166 aa12.72□□□□□ -0.37
SCARF1-203ENST00000434376 TMEM106BQ9NUM4 274 aa12.72□□□□□ -0.37
SCARF1-203ENST00000434376 C17orf112F2Z3M2 114 aa12.71□□□□□ -0.37
SCARF1-203ENST00000434376 YPEL1O60688 119 aa12.71□□□□□ -0.37
SCARF1-203ENST00000434376 FRMD6-AS1P0C7T7 363 aa12.71□□□□□ -0.37
SCARF1-203ENST00000434376 CT45A6P0DMU7 189 aa12.71□□□□□ -0.37
SCARF1-203ENST00000434376 CT45A5P0DMU8 189 aa12.71□□□□□ -0.37
SCARF1-203ENST00000434376 CT45A7P0DMV0 189 aa12.71□□□□□ -0.37
SCARF1-203ENST00000434376 CNTFRP26992 372 aa12.71□□□□□ -0.37
SCARF1-203ENST00000434376 TPPP2P59282 170 aa12.71□□□□□ -0.37
SCARF1-203ENST00000434376 PLGLAQ15195 96 aa12.71□□□□□ -0.37
SCARF1-203ENST00000434376 ZNF714Q96N38 554 aa12.71□□□□□ -0.37
SCARF1-203ENST00000434376 YPEL2Q96QA6 119 aa12.71□□□□□ -0.37
SCARF1-203ENST00000434376 MGST2Q99735 147 aa12.71□□□□□ -0.37
SCARF1-203ENST00000434376 A0A1B0GWJ7 208 aa12.71□□□□□ -0.38
SCARF1-203ENST00000434376 SCO2A0A1W2PP80 73 aa12.71□□□□□ -0.38
SCARF1-203ENST00000434376 RBFOX2O43251 390 aaKnown RBP eCLIP12.71□□□□□ -0.38
SCARF1-203ENST00000434376 SIAH2O43255 324 aa12.71□□□□□ -0.38
SCARF1-203ENST00000434376 C11orf42Q8N5U0 333 aa12.71□□□□□ -0.38
SCARF1-203ENST00000434376 LPAR2Q9HBW0 351 aa12.71□□□□□ -0.38
SCARF1-203ENST00000434376 HILPDAQ9Y5L2 63 aa12.71□□□□□ -0.38
SCARF1-203ENST00000434376 ZNF462Q96JM2 2506 aa12.71□□□□□ -0.38
SCARF1-203ENST00000434376 SRP14P37108 136 aaKnown RBP12.7□□□□□ -0.38
SCARF1-203ENST00000434376 PYGO2Q9BRQ0 406 aa12.7□□□□□ -0.38
SCARF1-203ENST00000434376 CTSZQ9UBR2 303 aa12.7□□□□□ -0.38
SCARF1-203ENST00000434376 IGLV3-9A0A075B6K5 115 aa12.7□□□□□ -0.38
SCARF1-203ENST00000434376 TRAV5A0A0B4J249 113 aa12.7□□□□□ -0.38
SCARF1-203ENST00000434376 PMS2P5A8MQ11 134 aa12.7□□□□□ -0.38
SCARF1-203ENST00000434376 OR5G3P0C626 314 aa12.7□□□□□ -0.38
SCARF1-203ENST00000434376 OPRK1P41145 380 aa12.7□□□□□ -0.38
SCARF1-203ENST00000434376 PSG5Q15238 335 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms