RNA–Protein interactions for RNA: ENST00000431803.2

CDC42-IT1-201, CDC42 intronic transcript 1, humanhuman

TSL 1 (best) BASIC

Gene CDC42-IT1, Length 692 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-IT1-201ENST00000431803 TMEM56Q96MV1 263 aa6.97□□□□□ -1.29
CDC42-IT1-201ENST00000431803 SCPEP1Q9HB40 452 aa6.97□□□□□ -1.29
CDC42-IT1-201ENST00000431803 UBQLN2Q9UHD9 624 aa6.97□□□□□ -1.29
CDC42-IT1-201ENST00000431803 IGHV3OR16-8A0A075B7F1 116 aa6.96□□□□□ -1.3
CDC42-IT1-201ENST00000431803 A0A087WXM4 84 aa6.96□□□□□ -1.3
CDC42-IT1-201ENST00000431803 A0A0J9YWU9 116 aa6.96□□□□□ -1.3
CDC42-IT1-201ENST00000431803 OR4C46A6NHA9 309 aa6.96□□□□□ -1.3
CDC42-IT1-201ENST00000431803 I3L2K1 104 aa6.96□□□□□ -1.3
CDC42-IT1-201ENST00000431803 UBE2CO00762 179 aa6.96□□□□□ -1.3
CDC42-IT1-201ENST00000431803 SPRY2O43597 315 aa6.96□□□□□ -1.3
CDC42-IT1-201ENST00000431803 APOA1P02647 267 aa6.96□□□□□ -1.3
CDC42-IT1-201ENST00000431803 BMI1P35226 326 aa6.96□□□□□ -1.3
CDC42-IT1-201ENST00000431803 UCP3P55916 312 aa6.96□□□□□ -1.3
CDC42-IT1-201ENST00000431803 EWSR1Q01844 656 aaKnown RBP eCLIP6.96□□□□□ -1.3
CDC42-IT1-201ENST00000431803 DEFB135Q30KP9 77 aa6.96□□□□□ -1.3
CDC42-IT1-201ENST00000431803 Q56UQ5 140 aa6.96□□□□□ -1.3
CDC42-IT1-201ENST00000431803 LPCAT3Q6P1A2 487 aa6.96□□□□□ -1.3
CDC42-IT1-201ENST00000431803 TBC1D26Q86UD7 250 aa6.96□□□□□ -1.3
CDC42-IT1-201ENST00000431803 UBAC2Q8NBM4 344 aa6.96□□□□□ -1.3
CDC42-IT1-201ENST00000431803 LINC00476Q8WZB0 136 aa6.96□□□□□ -1.3
CDC42-IT1-201ENST00000431803 OR10C1Q96KK4 312 aa6.96□□□□□ -1.3
CDC42-IT1-201ENST00000431803 CMTM3Q96MX0 182 aa6.96□□□□□ -1.3
CDC42-IT1-201ENST00000431803 C20orf24Q9BUV8 137 aa6.96□□□□□ -1.3
CDC42-IT1-201ENST00000431803 VCX3AQ9NNX9 186 aa6.96□□□□□ -1.3
CDC42-IT1-201ENST00000431803 IGHV7-4-1A0A0J9YVY3 117 aa6.95□□□□□ -1.3
CDC42-IT1-201ENST00000431803 NUPL2O15504 423 aaKnown RBP6.95□□□□□ -1.3
CDC42-IT1-201ENST00000431803 ZNF207O43670 478 aaKnown RBP6.95□□□□□ -1.3
CDC42-IT1-201ENST00000431803 TNFAIP8O95379 198 aa6.95□□□□□ -1.3
CDC42-IT1-201ENST00000431803 CTSDP07339 412 aaPredicted RBP6.95□□□□□ -1.3
CDC42-IT1-201ENST00000431803 S100GP29377 79 aa6.95□□□□□ -1.3
CDC42-IT1-201ENST00000431803 RCVRNP35243 200 aa6.95□□□□□ -1.3
CDC42-IT1-201ENST00000431803 TSPAN5P62079 268 aa6.95□□□□□ -1.3
CDC42-IT1-201ENST00000431803 NCS1P62166 190 aa6.95□□□□□ -1.3
CDC42-IT1-201ENST00000431803 PRCDQ00LT1 54 aa6.95□□□□□ -1.3
CDC42-IT1-201ENST00000431803 RELQ04864 619 aaPredicted RBP6.95□□□□□ -1.3
CDC42-IT1-201ENST00000431803 ANKRD39Q53RE8 183 aa6.95□□□□□ -1.3
CDC42-IT1-201ENST00000431803 H2BFWTQ7Z2G1 175 aa6.95□□□□□ -1.3
CDC42-IT1-201ENST00000431803 LYG2Q86SG7 212 aa6.95□□□□□ -1.3
CDC42-IT1-201ENST00000431803 MRGPRFQ96AM1 343 aa6.95□□□□□ -1.3
CDC42-IT1-201ENST00000431803 RNF183Q96D59 192 aa6.95□□□□□ -1.3
CDC42-IT1-201ENST00000431803 RNF2Q99496 336 aa6.95□□□□□ -1.3
CDC42-IT1-201ENST00000431803 TXN2Q99757 166 aa6.95□□□□□ -1.3
CDC42-IT1-201ENST00000431803 NXF2Q9GZY0 626 aaKnown RBP6.95□□□□□ -1.3
CDC42-IT1-201ENST00000431803 COMMD3Q9UBI1 195 aa6.95□□□□□ -1.3
CDC42-IT1-201ENST00000431803 SMPXQ9UHP9 88 aa6.95□□□□□ -1.3
CDC42-IT1-201ENST00000431803 SMIM31A0A1B0GVY4 71 aa6.94□□□□□ -1.3
CDC42-IT1-201ENST00000431803 CXorf65A6NEN9 183 aa6.94□□□□□ -1.3
CDC42-IT1-201ENST00000431803 NUPR2A6NF83 97 aa6.94□□□□□ -1.3
CDC42-IT1-201ENST00000431803 CHEK1O14757 476 aa6.94□□□□□ -1.3
CDC42-IT1-201ENST00000431803 MT-CO2P00403 227 aa6.94□□□□□ -1.3
CDC42-IT1-201ENST00000431803 P0C879 139 aa6.94□□□□□ -1.3
CDC42-IT1-201ENST00000431803 ELK1P19419 428 aa6.94□□□□□ -1.3
CDC42-IT1-201ENST00000431803 MFAP4P55083 255 aa6.94□□□□□ -1.3
CDC42-IT1-201ENST00000431803 RND3P61587 244 aa6.94□□□□□ -1.3
CDC42-IT1-201ENST00000431803 HSPE1P61604 102 aaKnown RBP6.94□□□□□ -1.3
CDC42-IT1-201ENST00000431803 SRSF3P84103 164 aaKnown RBP6.94□□□□□ -1.3
CDC42-IT1-201ENST00000431803 FAM90A2PQ658T7 463 aa6.94□□□□□ -1.3
CDC42-IT1-201ENST00000431803 SNX29P2Q8IUI4 249 aa6.94□□□□□ -1.3
CDC42-IT1-201ENST00000431803 STPG3Q8N7X2 389 aa6.94□□□□□ -1.3
CDC42-IT1-201ENST00000431803 OR4A16Q8NH70 328 aa6.94□□□□□ -1.3
CDC42-IT1-201ENST00000431803 GALNT14Q96FL9 552 aa6.94□□□□□ -1.3
CDC42-IT1-201ENST00000431803 FUNDC2Q9BWH2 189 aa6.94□□□□□ -1.3
CDC42-IT1-201ENST00000431803 RHPN1-AS1Q9BWJ2 59 aa6.94□□□□□ -1.3
CDC42-IT1-201ENST00000431803 MAP6D1Q9H9H5 199 aa6.94□□□□□ -1.3
CDC42-IT1-201ENST00000431803 VPS13DQ5THJ4 4388 aa6.94□□□□□ -1.3
CDC42-IT1-201ENST00000431803 DNAH10Q8IVF4 4471 aa6.93□□□□□ -1.3
CDC42-IT1-201ENST00000431803 INS-IGF2F8WCM5 200 aa6.93□□□□□ -1.3
CDC42-IT1-201ENST00000431803 M0QYG6 137 aa6.93□□□□□ -1.3
CDC42-IT1-201ENST00000431803 HPGDSO60760 199 aa6.93□□□□□ -1.3
CDC42-IT1-201ENST00000431803 IGKV1-5P01602 117 aa6.93□□□□□ -1.3
CDC42-IT1-201ENST00000431803 IGHV3-48P01763 117 aa6.93□□□□□ -1.3
CDC42-IT1-201ENST00000431803 RPL35AP18077 110 aaKnown RBP6.93□□□□□ -1.3
CDC42-IT1-201ENST00000431803 VBP1P61758 197 aa6.93□□□□□ -1.3
CDC42-IT1-201ENST00000431803 PMS2P11Q13670 270 aa6.93□□□□□ -1.3
CDC42-IT1-201ENST00000431803 PVRIGQ6DKI7 326 aa6.93□□□□□ -1.3
CDC42-IT1-201ENST00000431803 CEMP1Q6PRD7 247 aaPredicted RBP6.93□□□□□ -1.3
CDC42-IT1-201ENST00000431803 LHFPL1Q86WI0 220 aa6.93□□□□□ -1.3
CDC42-IT1-201ENST00000431803 APRG1Q8IVJ8 170 aa6.93□□□□□ -1.3
CDC42-IT1-201ENST00000431803 TMEM116Q8NCL8 245 aa6.93□□□□□ -1.3
CDC42-IT1-201ENST00000431803 ZNF486Q96H40 463 aaPredicted RBP6.93□□□□□ -1.3
CDC42-IT1-201ENST00000431803 IGHV3-49A0A0A0MS15 119 aa6.92□□□□□ -1.3
CDC42-IT1-201ENST00000431803 TRAV14DV4A0A0A6YYC5 116 aa6.92□□□□□ -1.3
CDC42-IT1-201ENST00000431803 A0A0B4J293 547 aa6.92□□□□□ -1.3
CDC42-IT1-201ENST00000431803 YIF1AO95070 293 aa6.92□□□□□ -1.3
CDC42-IT1-201ENST00000431803 ERHP84090 104 aaKnown RBP6.92□□□□□ -1.3
CDC42-IT1-201ENST00000431803 IZUMO4Q1ZYL8 232 aa6.92□□□□□ -1.3
CDC42-IT1-201ENST00000431803 LCE1DQ5T752 114 aa6.92□□□□□ -1.3
CDC42-IT1-201ENST00000431803 TOMM20LQ6UXN7 152 aa6.92□□□□□ -1.3
CDC42-IT1-201ENST00000431803 ARRDC1Q8N5I2 433 aa6.92□□□□□ -1.3
CDC42-IT1-201ENST00000431803 TMEM217Q8N7C4 229 aa6.92□□□□□ -1.3
CDC42-IT1-201ENST00000431803 PINX1Q96BK5 328 aaKnown RBP6.92□□□□□ -1.3
CDC42-IT1-201ENST00000431803 TP53RKQ96S44 253 aa6.92□□□□□ -1.3
CDC42-IT1-201ENST00000431803 C6orf62Q9GZU0 229 aaPredicted RBP6.92□□□□□ -1.3
CDC42-IT1-201ENST00000431803 VSIRQ9H7M9 311 aa6.92□□□□□ -1.3
CDC42-IT1-201ENST00000431803 KLK11Q9UBX7 282 aa6.92□□□□□ -1.3
CDC42-IT1-201ENST00000431803 HECTD4Q9Y4D8 3996 aa6.91□□□□□ -1.3
CDC42-IT1-201ENST00000431803 IGHV3OR16-13A0A075B7E8 117 aa6.91□□□□□ -1.3
CDC42-IT1-201ENST00000431803 IGHV3-74A0A0B4J1X5 117 aa6.91□□□□□ -1.3
CDC42-IT1-201ENST00000431803 GNG7O60262 68 aa6.91□□□□□ -1.3
CDC42-IT1-201ENST00000431803 LY6G6CO95867 125 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms