RNA–Protein interactions for RNA: ENST00000431429.1

HMGB1P27-201, Transcript of high mobility group box 1 pseudogene 27, humanhuman

BASIC

Gene HMGB1P27, Length 603 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P27-201ENST00000431429 MUC7Q8TAX7 377 aa1.47□□□□□ -2.17
HMGB1P27-201ENST00000431429 TNFAIP8L1Q8WVP5 186 aa1.47□□□□□ -2.17
HMGB1P27-201ENST00000431429 ANKRD7Q92527 254 aa1.47□□□□□ -2.17
HMGB1P27-201ENST00000431429 SMIM12Q96EX1 92 aa1.47□□□□□ -2.17
HMGB1P27-201ENST00000431429 CAPZA3Q96KX2 299 aa1.47□□□□□ -2.17
HMGB1P27-201ENST00000431429 SLC22A4Q9H015 551 aa1.47□□□□□ -2.17
HMGB1P27-201ENST00000431429 LINC00527Q9UJ94 153 aa1.47□□□□□ -2.17
HMGB1P27-201ENST00000431429 ATP6V1DQ9Y5K8 247 aa1.47□□□□□ -2.17
HMGB1P27-201ENST00000431429 TINCRA0A1B0GVN0 87 aa1.46□□□□□ -2.18
HMGB1P27-201ENST00000431429 SIGLEC16A6NMB1 481 aa1.46□□□□□ -2.18
HMGB1P27-201ENST00000431429 H0YGG7 62 aa1.46□□□□□ -2.18
HMGB1P27-201ENST00000431429 PSMD12O00232 456 aaPredicted RBP1.46□□□□□ -2.18
HMGB1P27-201ENST00000431429 CCRL2O00421 344 aa1.46□□□□□ -2.18
HMGB1P27-201ENST00000431429 TP53I11O14683 189 aa1.46□□□□□ -2.18
HMGB1P27-201ENST00000431429 HPGDSO60760 199 aa1.46□□□□□ -2.18
HMGB1P27-201ENST00000431429 C1QAP02745 245 aa1.46□□□□□ -2.18
HMGB1P27-201ENST00000431429 GYPCP04921 128 aa1.46□□□□□ -2.18
HMGB1P27-201ENST00000431429 CALB1P05937 261 aa1.46□□□□□ -2.18
HMGB1P27-201ENST00000431429 GUSBP08236 651 aa1.46□□□□□ -2.18
HMGB1P27-201ENST00000431429 IGHV3-30-3P0DP02 117 aa1.46□□□□□ -2.18
HMGB1P27-201ENST00000431429 ZNF22P17026 224 aaPredicted RBP1.46□□□□□ -2.18
HMGB1P27-201ENST00000431429 S100A2P29034 98 aa1.46□□□□□ -2.18
HMGB1P27-201ENST00000431429 CD40LGP29965 261 aa1.46□□□□□ -2.18
HMGB1P27-201ENST00000431429 AGTR1P30556 359 aa1.46□□□□□ -2.18
HMGB1P27-201ENST00000431429 PSMB3P49720 205 aa1.46□□□□□ -2.18
HMGB1P27-201ENST00000431429 LINC00313P59037 77 aa1.46□□□□□ -2.18
HMGB1P27-201ENST00000431429 MAXP61244 160 aa1.46□□□□□ -2.18
HMGB1P27-201ENST00000431429 FGF12P61328 243 aa1.46□□□□□ -2.18
HMGB1P27-201ENST00000431429 APOFQ13790 326 aa1.46□□□□□ -2.18
HMGB1P27-201ENST00000431429 TRMT12Q53H54 448 aaKnown RBP1.46□□□□□ -2.18
HMGB1P27-201ENST00000431429 MESTQ5EB52 335 aa1.46□□□□□ -2.18
HMGB1P27-201ENST00000431429 DCUN1D2Q6PH85 259 aa1.46□□□□□ -2.18
HMGB1P27-201ENST00000431429 TTC33Q6PID6 262 aaPredicted RBP1.46□□□□□ -2.18
HMGB1P27-201ENST00000431429 HS3ST5Q8IZT8 346 aa1.46□□□□□ -2.18
HMGB1P27-201ENST00000431429 C10orf105Q8TEF2 133 aa1.46□□□□□ -2.18
HMGB1P27-201ENST00000431429 FAM172AQ8WUF8 416 aa1.46□□□□□ -2.18
HMGB1P27-201ENST00000431429 MUCL1Q96DR8 90 aa1.46□□□□□ -2.18
HMGB1P27-201ENST00000431429 SMIM19Q96E16 107 aa1.46□□□□□ -2.18
HMGB1P27-201ENST00000431429 SLC25A44Q96H78 314 aaPredicted RBP1.46□□□□□ -2.18
HMGB1P27-201ENST00000431429 IGF2BP2-AS1Q96M15 143 aa1.46□□□□□ -2.18
HMGB1P27-201ENST00000431429 UPK3BQ9BT76 320 aa1.46□□□□□ -2.18
HMGB1P27-201ENST00000431429 POTEKPQ9BYX7 375 aa1.46□□□□□ -2.18
HMGB1P27-201ENST00000431429 CBLN4Q9NTU7 201 aa1.46□□□□□ -2.18
HMGB1P27-201ENST00000431429 PLEKHJ1Q9NW61 149 aa1.46□□□□□ -2.18
HMGB1P27-201ENST00000431429 MRPS16Q9Y3D3 137 aaKnown RBP1.46□□□□□ -2.18
HMGB1P27-201ENST00000431429 CHD5Q8TDI0 1954 aa1.46□□□□□ -2.18
HMGB1P27-201ENST00000431429 CACNA1CQ13936 2221 aa1.46□□□□□ -2.18
HMGB1P27-201ENST00000431429 NYNRINQ9P2P1 1898 aaKnown RBP1.46□□□□□ -2.18
HMGB1P27-201ENST00000431429 ZANQ9Y493 2812 aa1.45□□□□□ -2.18
HMGB1P27-201ENST00000431429 ABCA1O95477 2261 aa1.45□□□□□ -2.18
HMGB1P27-201ENST00000431429 SVEP1Q4LDE5 3571 aa1.45□□□□□ -2.18
HMGB1P27-201ENST00000431429 TENM1Q9UKZ4 2725 aa1.45□□□□□ -2.18
HMGB1P27-201ENST00000431429 A0A096LNT2 108 aa1.45□□□□□ -2.18
HMGB1P27-201ENST00000431429 GOLGA6L19H0YKK7 550 aa1.45□□□□□ -2.18
HMGB1P27-201ENST00000431429 OR2J2O76002 312 aa1.45□□□□□ -2.18
HMGB1P27-201ENST00000431429 PET100P0DJ07 73 aa1.45□□□□□ -2.18
HMGB1P27-201ENST00000431429 PSMA1P25786 263 aaKnown RBP1.45□□□□□ -2.18
HMGB1P27-201ENST00000431429 CRABP2P29373 138 aa1.45□□□□□ -2.18
HMGB1P27-201ENST00000431429 MIPP30301 263 aa1.45□□□□□ -2.18
HMGB1P27-201ENST00000431429 GRPRP30550 384 aa1.45□□□□□ -2.18
HMGB1P27-201ENST00000431429 CTBP2P56545 445 aa1.45□□□□□ -2.18
HMGB1P27-201ENST00000431429 H2BFSP57053 126 aa1.45□□□□□ -2.18
HMGB1P27-201ENST00000431429 UBA52P62987 128 aaKnown RBP1.45□□□□□ -2.18
HMGB1P27-201ENST00000431429 TNFRSF9Q07011 255 aa1.45□□□□□ -2.18
HMGB1P27-201ENST00000431429 C1DQ13901 141 aaKnown RBP1.45□□□□□ -2.18
HMGB1P27-201ENST00000431429 LGALSLQ3ZCW2 172 aaPredicted RBP1.45□□□□□ -2.18
HMGB1P27-201ENST00000431429 DEFB121Q5J5C9 76 aa1.45□□□□□ -2.18
HMGB1P27-201ENST00000431429 NCMAPQ5T1S8 102 aa1.45□□□□□ -2.18
HMGB1P27-201ENST00000431429 LCE1CQ5T751 118 aa1.45□□□□□ -2.18
HMGB1P27-201ENST00000431429 LCE1BQ5T7P3 118 aa1.45□□□□□ -2.18
HMGB1P27-201ENST00000431429 FAM151BQ6UXP7 276 aa1.45□□□□□ -2.18
HMGB1P27-201ENST00000431429 FAM9CQ8IZT9 166 aa1.45□□□□□ -2.18
HMGB1P27-201ENST00000431429 LRRC25Q8N386 305 aaPredicted RBP1.45□□□□□ -2.18
HMGB1P27-201ENST00000431429 TBC1D19Q8N5T2 526 aa1.45□□□□□ -2.18
HMGB1P27-201ENST00000431429 CNEP1R1Q8N9A8 125 aa1.45□□□□□ -2.18
HMGB1P27-201ENST00000431429 LINC00301Q8NCQ3 95 aa1.45□□□□□ -2.18
HMGB1P27-201ENST00000431429 MORN4Q8NDC4 146 aa1.45□□□□□ -2.18
HMGB1P27-201ENST00000431429 CMTM2Q8TAZ6 248 aa1.45□□□□□ -2.18
HMGB1P27-201ENST00000431429 ACY3Q96HD9 319 aa1.45□□□□□ -2.18
HMGB1P27-201ENST00000431429 DOHHQ9BU89 302 aa1.45□□□□□ -2.18
HMGB1P27-201ENST00000431429 METTL9Q9H1A3 318 aa1.45□□□□□ -2.18
HMGB1P27-201ENST00000431429 OR51B6Q9H340 312 aa1.45□□□□□ -2.18
HMGB1P27-201ENST00000431429 CENPHQ9H3R5 247 aa1.45□□□□□ -2.18
HMGB1P27-201ENST00000431429 PARVAQ9NVD7 372 aa1.45□□□□□ -2.18
HMGB1P27-201ENST00000431429 PAQR5Q9NXK6 330 aaPredicted RBP1.45□□□□□ -2.18
HMGB1P27-201ENST00000431429 CADP27708 2225 aa1.45□□□□□ -2.18
HMGB1P27-201ENST00000431429 DSCAMO60469 2012 aa1.45□□□□□ -2.18
HMGB1P27-201ENST00000431429 MYH11P35749 1972 aa1.45□□□□□ -2.18
HMGB1P27-201ENST00000431429 USF3Q68DE3 2245 aa1.44□□□□□ -2.18
HMGB1P27-201ENST00000431429 TRRAPQ9Y4A5 3859 aa1.44□□□□□ -2.18
HMGB1P27-201ENST00000431429 IGKV3D-11A0A0A0MRZ8 115 aa1.44□□□□□ -2.18
HMGB1P27-201ENST00000431429 DAPL1A0PJW8 107 aa1.44□□□□□ -2.18
HMGB1P27-201ENST00000431429 METTL15A6NJ78 407 aa1.44□□□□□ -2.18
HMGB1P27-201ENST00000431429 GOLGA8KD6RF30 607 aa1.44□□□□□ -2.18
HMGB1P27-201ENST00000431429 F5H768 121 aa1.44□□□□□ -2.18
HMGB1P27-201ENST00000431429 GOLGA8MH3BSY2 632 aa1.44□□□□□ -2.18
HMGB1P27-201ENST00000431429 AZIN1O14977 448 aa1.44□□□□□ -2.18
HMGB1P27-201ENST00000431429 PFDN6O15212 129 aa1.44□□□□□ -2.18
HMGB1P27-201ENST00000431429 BIRC5O15392 142 aa1.44□□□□□ -2.18
HMGB1P27-201ENST00000431429 PSCAO43653 123 aa1.44□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms