RNA–Protein interactions for RNA: ENST00000431390.5

HMGN1-206, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,552 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-206ENST00000431390 PVRIGQ6DKI7 326 aa14.4□□□□□ -0.1
HMGN1-206ENST00000431390 ZNF767PQ75MW2 155 aa14.4□□□□□ -0.1
HMGN1-206ENST00000431390 ZNF680Q8NEM1 530 aa14.4□□□□□ -0.1
HMGN1-206ENST00000431390 OR1P1Q8NH06 330 aa14.4□□□□□ -0.1
HMGN1-206ENST00000431390 HSPB9Q9BQS6 159 aa14.4□□□□□ -0.1
HMGN1-206ENST00000431390 TMEM147Q9BVK8 224 aa14.4□□□□□ -0.1
HMGN1-206ENST00000431390 PARD6GQ9BYG4 376 aaPredicted RBP14.4□□□□□ -0.1
HMGN1-206ENST00000431390 VPREB3Q9UKI3 123 aa14.4□□□□□ -0.1
HMGN1-206ENST00000431390 IFNA5P01569 189 aa14.39□□□□□ -0.11
HMGN1-206ENST00000431390 REG1AP05451 166 aa14.39□□□□□ -0.11
HMGN1-206ENST00000431390 CTRB1P17538 263 aa14.39□□□□□ -0.11
HMGN1-206ENST00000431390 CTRB2Q6GPI1 263 aa14.39□□□□□ -0.11
HMGN1-206ENST00000431390 SGMS2Q8NHU3 365 aa14.39□□□□□ -0.11
HMGN1-206ENST00000431390 RNASEH2CQ8TDP1 164 aaKnown RBP14.39□□□□□ -0.11
HMGN1-206ENST00000431390 FAM103A1Q9BTL3 118 aaKnown RBP14.39□□□□□ -0.11
HMGN1-206ENST00000431390 C19orf24Q9BVV8 132 aa14.39□□□□□ -0.11
HMGN1-206ENST00000431390 F11RQ9Y624 299 aaKnown RBP14.39□□□□□ -0.11
HMGN1-206ENST00000431390 NPIPB5A8MRT5 1133 aa14.39□□□□□ -0.11
HMGN1-206ENST00000431390 FNDC10F2Z333 226 aa14.39□□□□□ -0.11
HMGN1-206ENST00000431390 CRYGCP07315 174 aa14.39□□□□□ -0.11
HMGN1-206ENST00000431390 EGR2P11161 476 aaPredicted RBP14.39□□□□□ -0.11
HMGN1-206ENST00000431390 SCGB2A2Q13296 93 aa14.39□□□□□ -0.11
HMGN1-206ENST00000431390 EXOSC2Q13868 293 aaKnown RBP14.39□□□□□ -0.11
HMGN1-206ENST00000431390 TMEM68Q96MH6 324 aa14.39□□□□□ -0.11
HMGN1-206ENST00000431390 GINS3Q9BRX5 216 aa14.39□□□□□ -0.11
HMGN1-206ENST00000431390 UQCC1Q9NVA1 299 aa14.39□□□□□ -0.11
HMGN1-206ENST00000431390 FBXO7Q9Y3I1 522 aa14.39□□□□□ -0.11
HMGN1-206ENST00000431390 CORTO00230 105 aa14.38□□□□□ -0.11
HMGN1-206ENST00000431390 APELAP0DMC3 54 aa14.38□□□□□ -0.11
HMGN1-206ENST00000431390 ASPHD1Q5U4P2 390 aa14.38□□□□□ -0.11
HMGN1-206ENST00000431390 TTC9CQ8N5M4 171 aa14.38□□□□□ -0.11
HMGN1-206ENST00000431390 TMEM86BQ8N661 226 aa14.38□□□□□ -0.11
HMGN1-206ENST00000431390 OR1L6Q8NGR2 347 aa14.38□□□□□ -0.11
HMGN1-206ENST00000431390 CRIP2P52943 208 aaPredicted RBP14.37□□□□□ -0.11
HMGN1-206ENST00000431390 EIF5AL1Q6IS14 154 aaKnown RBP14.37□□□□□ -0.11
HMGN1-206ENST00000431390 SIGLECL1Q8N7X8 197 aa14.37□□□□□ -0.11
HMGN1-206ENST00000431390 SCARB1Q8WTV0 552 aa14.37□□□□□ -0.11
HMGN1-206ENST00000431390 CACNG8Q8WXS5 425 aa14.37□□□□□ -0.11
HMGN1-206ENST00000431390 PARP11Q9NR21 331 aa14.37□□□□□ -0.11
HMGN1-206ENST00000431390 UBQLN2Q9UHD9 624 aa14.37□□□□□ -0.11
HMGN1-206ENST00000431390 ANK2Q01484 3957 aa14.37□□□□□ -0.11
HMGN1-206ENST00000431390 ATP6V0E1O15342 81 aa14.36□□□□□ -0.11
HMGN1-206ENST00000431390 HOXA3O43365 443 aaPredicted RBP14.36□□□□□ -0.11
HMGN1-206ENST00000431390 FBXO24O75426 580 aa14.36□□□□□ -0.11
HMGN1-206ENST00000431390 TSPAN9O75954 239 aa14.36□□□□□ -0.11
HMGN1-206ENST00000431390 GPX4P36969 197 aaPredicted RBP14.36□□□□□ -0.11
HMGN1-206ENST00000431390 CD69Q07108 199 aa14.36□□□□□ -0.11
HMGN1-206ENST00000431390 SLC25A24Q6NUK1 477 aa14.36□□□□□ -0.11
HMGN1-206ENST00000431390 ALKAL2Q6UX46 152 aa14.36□□□□□ -0.11
HMGN1-206ENST00000431390 LFNGQ8NES3 379 aa14.36□□□□□ -0.11
HMGN1-206ENST00000431390 SCGB1C1Q8TD33 95 aa14.36□□□□□ -0.11
HMGN1-206ENST00000431390 WDR61Q9GZS3 305 aaKnown RBP14.36□□□□□ -0.11
HMGN1-206ENST00000431390 WNT10AQ9GZT5 417 aa14.36□□□□□ -0.11
HMGN1-206ENST00000431390 UBE2L5PA0A1B0GUS4 154 aa14.35□□□□□ -0.11
HMGN1-206ENST00000431390 SH2D7A6NKC9 451 aaPredicted RBP14.35□□□□□ -0.11
HMGN1-206ENST00000431390 IGHG2P01859 326 aa14.35□□□□□ -0.11
HMGN1-206ENST00000431390 MFAP2P55001 183 aa14.35□□□□□ -0.11
HMGN1-206ENST00000431390 HSD17B11Q8NBQ5 300 aa14.35□□□□□ -0.11
HMGN1-206ENST00000431390 GNPNAT1Q96EK6 184 aaPredicted RBP14.35□□□□□ -0.11
HMGN1-206ENST00000431390 CYB5BO43169 146 aa14.34□□□□□ -0.11
HMGN1-206ENST00000431390 SEC11BP0C7V7 166 aa14.34□□□□□ -0.11
HMGN1-206ENST00000431390 SPP1P10451 314 aa14.34□□□□□ -0.11
HMGN1-206ENST00000431390 DEFA4P12838 97 aa14.34□□□□□ -0.11
HMGN1-206ENST00000431390 MDKP21741 143 aaPredicted RBP14.34□□□□□ -0.11
HMGN1-206ENST00000431390 AKIRIN2Q53H80 203 aa14.34□□□□□ -0.11
HMGN1-206ENST00000431390 ARSJQ5FYB0 599 aaPredicted RBP14.34□□□□□ -0.11
HMGN1-206ENST00000431390 ETFRF1Q6IPR1 90 aa14.34□□□□□ -0.11
HMGN1-206ENST00000431390 RBMS3Q6XE24 437 aaKnown RBP14.34□□□□□ -0.11
HMGN1-206ENST00000431390 NPVFQ9HCQ7 196 aa14.34□□□□□ -0.11
HMGN1-206ENST00000431390 IGF1P05019 195 aa14.34□□□□□ -0.11
HMGN1-206ENST00000431390 SRD5A1P18405 259 aa14.34□□□□□ -0.11
HMGN1-206ENST00000431390 ATP6V0CP27449 155 aa14.34□□□□□ -0.11
HMGN1-206ENST00000431390 OPRK1P41145 380 aa14.34□□□□□ -0.11
HMGN1-206ENST00000431390 C9orf152Q5JTZ5 239 aa14.34□□□□□ -0.11
HMGN1-206ENST00000431390 UNQ5815/PRO19632Q6UWF5 114 aa14.34□□□□□ -0.11
HMGN1-206ENST00000431390 SLC16A13Q7RTY0 426 aa14.34□□□□□ -0.11
HMGN1-206ENST00000431390 SLC35E3Q7Z769 313 aa14.34□□□□□ -0.11
HMGN1-206ENST00000431390 FAM110DQ8TAY7 271 aaPredicted RBP14.34□□□□□ -0.11
HMGN1-206ENST00000431390 TAF15Q92804 592 aaKnown RBP eCLIP14.34□□□□□ -0.11
HMGN1-206ENST00000431390 WDR83OSQ9Y284 106 aa14.34□□□□□ -0.11
HMGN1-206ENST00000431390 DMRT1Q9Y5R6 373 aa14.34□□□□□ -0.11
HMGN1-206ENST00000431390 RPS10-NUDT3A0A1W2PQS6 291 aa14.33□□□□□ -0.12
HMGN1-206ENST00000431390 LINC01548A6NM66 108 aa14.33□□□□□ -0.12
HMGN1-206ENST00000431390 MPDU1O75352 247 aa14.33□□□□□ -0.12
HMGN1-206ENST00000431390 BLCAPP62952 87 aa14.33□□□□□ -0.12
HMGN1-206ENST00000431390 TREML4Q6UXN2 200 aa14.33□□□□□ -0.12
HMGN1-206ENST00000431390 C19orf35Q6ZS72 473 aa14.33□□□□□ -0.12
HMGN1-206ENST00000431390 TMED6Q8WW62 240 aa14.33□□□□□ -0.12
HMGN1-206ENST00000431390 MISP3Q96FF7 219 aa14.33□□□□□ -0.12
HMGN1-206ENST00000431390 TNFRSF19Q9NS68 423 aa14.33□□□□□ -0.12
HMGN1-206ENST00000431390 ZNF580Q9UK33 172 aa14.33□□□□□ -0.12
HMGN1-206ENST00000431390 SMCO3A2RU48 225 aa14.32□□□□□ -0.12
HMGN1-206ENST00000431390 FGF7P21781 194 aa14.32□□□□□ -0.12
HMGN1-206ENST00000431390 ECSCRQ19T08 205 aa14.32□□□□□ -0.12
HMGN1-206ENST00000431390 KLK9Q2XQG4 91 aa14.32□□□□□ -0.12
HMGN1-206ENST00000431390 SLC35E1Q96K37 410 aa14.32□□□□□ -0.12
HMGN1-206ENST00000431390 PSMG3Q9BT73 122 aaPredicted RBP14.32□□□□□ -0.12
HMGN1-206ENST00000431390 SLC25A32Q9H2D1 315 aa14.32□□□□□ -0.12
HMGN1-206ENST00000431390 FNDC4Q9H6D8 234 aaPredicted RBP14.32□□□□□ -0.12
HMGN1-206ENST00000431390 KLK9Q9UKQ9 250 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms