RNA–Protein interactions for RNA: ENST00000430158.5

USP40-205, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 3

Gene USP40, Length 1,047 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-205ENST00000430158 RBKSQ9H477 322 aa9.56□□□□□ -0.88
USP40-205ENST00000430158 CACFD1Q9UGQ2 172 aa9.56□□□□□ -0.88
USP40-205ENST00000430158 IGHV4OR15-8A0A075B7B6 117 aa9.55□□□□□ -0.88
USP40-205ENST00000430158 A0A087WW49 117 aa9.55□□□□□ -0.88
USP40-205ENST00000430158 C13orf42A0A1B0GVH6 325 aa9.55□□□□□ -0.88
USP40-205ENST00000430158 MFSD2BA6NFX1 497 aa9.55□□□□□ -0.88
USP40-205ENST00000430158 FAM90A26D6RGX4 464 aa9.55□□□□□ -0.88
USP40-205ENST00000430158 I3L2K1 104 aa9.55□□□□□ -0.88
USP40-205ENST00000430158 PRAF2O60831 178 aa9.55□□□□□ -0.88
USP40-205ENST00000430158 DHFRP00374 187 aa9.55□□□□□ -0.88
USP40-205ENST00000430158 HSPB1P04792 205 aaKnown RBP9.55□□□□□ -0.88
USP40-205ENST00000430158 ERHP84090 104 aaKnown RBP9.55□□□□□ -0.88
USP40-205ENST00000430158 OR11H1Q8NG94 326 aa9.55□□□□□ -0.88
USP40-205ENST00000430158 OR1N2Q8NGR9 330 aa9.55□□□□□ -0.88
USP40-205ENST00000430158 ZNF502Q8TBZ5 544 aa9.55□□□□□ -0.88
USP40-205ENST00000430158 PGPEP1Q9NXJ5 209 aa9.55□□□□□ -0.88
USP40-205ENST00000430158 FBN3Q75N90 2809 aa9.55□□□□□ -0.88
USP40-205ENST00000430158 C7orf66A4D0T2 115 aa9.54□□□□□ -0.88
USP40-205ENST00000430158 NXPH3O95157 252 aa9.54□□□□□ -0.88
USP40-205ENST00000430158 DEFA4P12838 97 aa9.54□□□□□ -0.88
USP40-205ENST00000430158 ZNF616Q08AN1 781 aa9.54□□□□□ -0.88
USP40-205ENST00000430158 EXOSC2Q13868 293 aaKnown RBP9.54□□□□□ -0.88
USP40-205ENST00000430158 C2orf83Q53S99 150 aa9.54□□□□□ -0.88
USP40-205ENST00000430158 SLC25A24Q6NUK1 477 aa9.54□□□□□ -0.88
USP40-205ENST00000430158 ZBTB8BQ8NAP8 495 aaPredicted RBP9.54□□□□□ -0.88
USP40-205ENST00000430158 OR1L6Q8NGR2 347 aa9.54□□□□□ -0.88
USP40-205ENST00000430158 OR1S1Q8NH92 325 aa9.54□□□□□ -0.88
USP40-205ENST00000430158 VN1R17PQ8TDU5 208 aa9.54□□□□□ -0.88
USP40-205ENST00000430158 SCARB1Q8WTV0 552 aa9.54□□□□□ -0.88
USP40-205ENST00000430158 PDCD10Q9BUL8 212 aa9.54□□□□□ -0.88
USP40-205ENST00000430158 S4R3C0 116 aa9.54□□□□□ -0.88
USP40-205ENST00000430158 ANKRD34BA5PLL1 514 aa9.53□□□□□ -0.88
USP40-205ENST00000430158 CEBPZOSA8MTT3 80 aa9.53□□□□□ -0.88
USP40-205ENST00000430158 LINC01619G3V211 115 aa9.53□□□□□ -0.88
USP40-205ENST00000430158 BMPR1BO00238 502 aa9.53□□□□□ -0.88
USP40-205ENST00000430158 CCSO14618 274 aa9.53□□□□□ -0.88
USP40-205ENST00000430158 TMEM50AO95807 157 aa9.53□□□□□ -0.88
USP40-205ENST00000430158 IFNA21P01568 189 aa9.53□□□□□ -0.88
USP40-205ENST00000430158 HOXA1P49639 335 aaPredicted RBP9.53□□□□□ -0.88
USP40-205ENST00000430158 KLF5Q13887 457 aaPredicted RBP9.53□□□□□ -0.88
USP40-205ENST00000430158 OXA1LQ15070 435 aa9.53□□□□□ -0.88
USP40-205ENST00000430158 FNDC4Q9H6D8 234 aaPredicted RBP9.53□□□□□ -0.88
USP40-205ENST00000430158 PEF1Q9UBV8 284 aaKnown RBP9.53□□□□□ -0.88
USP40-205ENST00000430158 TRBV7-1A0A0A6YYK4 115 aa9.52□□□□□ -0.89
USP40-205ENST00000430158 SYNGR2O43760 224 aa9.52□□□□□ -0.89
USP40-205ENST00000430158 IGHV3-23P01764 117 aa9.52□□□□□ -0.89
USP40-205ENST00000430158 FCGR2BP31994 310 aaPredicted RBP9.52□□□□□ -0.89
USP40-205ENST00000430158 SNCAP37840 140 aa9.52□□□□□ -0.89
USP40-205ENST00000430158 HTR2BP41595 481 aa9.52□□□□□ -0.89
USP40-205ENST00000430158 SLURP1P55000 103 aa9.52□□□□□ -0.89
USP40-205ENST00000430158 PAX9P55771 341 aa9.52□□□□□ -0.89
USP40-205ENST00000430158 MLANAQ16655 118 aa9.52□□□□□ -0.89
USP40-205ENST00000430158 TATDN3Q17R31 274 aa9.52□□□□□ -0.89
USP40-205ENST00000430158 IAH1Q2TAA2 248 aaPredicted RBP9.52□□□□□ -0.89
USP40-205ENST00000430158 DTD1Q8TEA8 209 aa9.52□□□□□ -0.89
USP40-205ENST00000430158 DCUN1D4Q92564 292 aa9.52□□□□□ -0.89
USP40-205ENST00000430158 DLX4Q92988 240 aaPredicted RBP9.52□□□□□ -0.89
USP40-205ENST00000430158 EEF1AKMT3Q96AZ1 226 aa9.52□□□□□ -0.89
USP40-205ENST00000430158 CXorf58Q96LI9 332 aa9.52□□□□□ -0.89
USP40-205ENST00000430158 ATP6V0BQ99437 205 aa9.52□□□□□ -0.89
USP40-205ENST00000430158 MAGT1Q9H0U3 335 aa9.52□□□□□ -0.89
USP40-205ENST00000430158 C11orf1Q9H5F2 150 aa9.52□□□□□ -0.89
USP40-205ENST00000430158 GPN1Q9HCN4 374 aaPredicted RBP9.52□□□□□ -0.89
USP40-205ENST00000430158 RANGRFQ9HD47 186 aaPredicted RBP9.52□□□□□ -0.89
USP40-205ENST00000430158 ENY2Q9NPA8 101 aa9.52□□□□□ -0.89
USP40-205ENST00000430158 HEYLQ9NQ87 328 aaPredicted RBP9.52□□□□□ -0.89
USP40-205ENST00000430158 THYN1Q9P016 225 aa9.52□□□□□ -0.89
USP40-205ENST00000430158 MRPL36Q9P0J6 103 aaKnown RBP9.52□□□□□ -0.89
USP40-205ENST00000430158 U3KQ87 197 aa9.52□□□□□ -0.89
USP40-205ENST00000430158 IGHV3-21A0A0B4J1V1 117 aa9.51□□□□□ -0.89
USP40-205ENST00000430158 C15orf62A8K5M9 175 aa9.51□□□□□ -0.89
USP40-205ENST00000430158 PPP5D1E7EU14 171 aa9.51□□□□□ -0.89
USP40-205ENST00000430158 MT-CO2P00403 227 aa9.51□□□□□ -0.89
USP40-205ENST00000430158 MBPP02686 304 aaPredicted RBP9.51□□□□□ -0.89
USP40-205ENST00000430158 PF4P02776 101 aa9.51□□□□□ -0.89
USP40-205ENST00000430158 CLEC3BP05452 202 aa9.51□□□□□ -0.89
USP40-205ENST00000430158 OR8U8P0C7N1 319 aa9.51□□□□□ -0.89
USP40-205ENST00000430158 HOXD3P31249 432 aaPredicted RBP9.51□□□□□ -0.89
USP40-205ENST00000430158 ADMP35318 185 aa9.51□□□□□ -0.89
USP40-205ENST00000430158 CLEC19AQ6UXS0 136 aa9.51□□□□□ -0.89
USP40-205ENST00000430158 IL34Q6ZMJ4 242 aa9.51□□□□□ -0.89
USP40-205ENST00000430158 UXS1Q8NBZ7 420 aa9.51□□□□□ -0.89
USP40-205ENST00000430158 SLC24A4Q8NFF2 622 aa9.51□□□□□ -0.89
USP40-205ENST00000430158 C2orf50Q96LR7 162 aa9.51□□□□□ -0.89
USP40-205ENST00000430158 OR4C12Q96R67 309 aa9.51□□□□□ -0.89
USP40-205ENST00000430158 RCL1Q9Y2P8 373 aaKnown RBP9.51□□□□□ -0.89
USP40-205ENST00000430158 PRSS46E5RG02 174 aa9.5□□□□□ -0.89
USP40-205ENST00000430158 CYB5BO43169 146 aa9.5□□□□□ -0.89
USP40-205ENST00000430158 MED6O75586 246 aa9.5□□□□□ -0.89
USP40-205ENST00000430158 IGHV3-48P01763 117 aa9.5□□□□□ -0.89
USP40-205ENST00000430158 CTSGP08311 255 aa9.5□□□□□ -0.89
USP40-205ENST00000430158 IAPPP10997 89 aa9.5□□□□□ -0.89
USP40-205ENST00000430158 NPY1RP25929 384 aa9.5□□□□□ -0.89
USP40-205ENST00000430158 NKX2-1P43699 371 aaPredicted RBP9.5□□□□□ -0.89
USP40-205ENST00000430158 SUB1P53999 127 aaKnown RBP eCLIP9.5□□□□□ -0.89
USP40-205ENST00000430158 ATP5IP56385 69 aaPredicted RBP9.5□□□□□ -0.89
USP40-205ENST00000430158 POLR2GP62487 172 aaKnown RBP eCLIP9.5□□□□□ -0.89
USP40-205ENST00000430158 RGS21Q2M5E4 152 aa9.5□□□□□ -0.89
USP40-205ENST00000430158 FAM209BQ5JX69 171 aa9.5□□□□□ -0.89
USP40-205ENST00000430158 DPF1Q92782 380 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms